A new species of dendrochirotid holothuroid from deep water of southern Japan, with the erection of a new genus, Satsumaocnus (Echinodermata: Holothuroidea: Dendrochirotida: Cucumariidae: Colochirinae)
Author
Yamana, Yusuke
0000-0002-8764-5850
yamanayusuke39@gmail.com
Author
Thandar, Ahmed S.
0000-0002-7368-5560
School of Life Sciences (Biology and Conservation), University of KwaZulu-Natal, Private Bag X 54001, Durban 4000, South Africa thandara @ ukzn. ac. za; https: // orcid. org / 0000 - 0002 - 7368 - 5560
thandara@ukzn.ac.za
Author
Hayashibara, Takeshi
Coastal and Inland Fisheries Ecosystem Division, Fisheries Technology Institute, Japan Fisheries Research and Education Agency, 2 - 12 - 4 Fukuura, Kanazawa-ku, Yokohama, 236 - 8648, Japan
Author
Setiamarga, Davin H. E.
0000-0002-8764-5850
Department of Applied Chemistry and Biochemistry, National Institute of Technology (KOSEN), Wakayama College, 77 Noshima, Nada, Gobo City, Wakayama 644 - 0023, Japan & The University Museum, The University of Tokyo, 7 - 3 - 1 Hongo, Bunkyo-ku, Tokyo 133 - 0033, Japan
yamanayusuke39@gmail.com
text
Zootaxa
2022
2022-11-16
5209
2
270
284
journal article
188705
10.11646/zootaxa.5209.2.7
5ccb5236-2b9c-4af1-80c9-40862aa75478
1175-5326
7326013
A4C30358-A40E-46EB-8FC6-C0119AFD20D7
Satsumaocnus kaiyomarui
sp. nov.
Yamana, Thandar, & Setiamarga
[New Japanese name: Satsuma-kinko]
(
Figs 2
,
3
,
4
, and 5;
Table 1
and
2
)
Etymology.
The specific name
kaiyomarui
is the genitive case of the R/V
Kaiyo Maru
of
Fisheries Agency of
Japan
.
Diagnosis.
As for the genus.
Material examined.
Holotype
, WMNH-2018-INV-3 (contracted length
62 mm
, width
17 mm
).
Paratypes
, 10 individuals: WMNH-2018-INV-4—only contracted measurements (length x breadth) recorded (
69 mm
x
24 mm
); WMNH-2018-INV-5 (
58 mm
x
20 mm
); WMNH-2018-INV-6 (
42 mm
x
12 mm
); WMNH-2018-INV-10 (
28 mm
x
9 mm
); WMNH-2018-INV-11 (
23 mm
x
8 mm
); WMNH-2018-INV-12 (
14 mm
x
16 mm
); WMNH-2018-INV-13 (
23 mm
x
6 mm
).
Three observed
paratypes
were also used for molecular analysis reported previously (
Yamana
et al.
, 2019
): WMNH-2018-INV-7 (
27 mm
x
11 mm
; Genbank accession numbers
LC
425500 for
COI
,
LC
425503 for H3); WMNH-2018-INV-8 (
21 mm
x
9 mm
; Genbank accession numbers
LC
425501 for
COI
,
LC
425504 for H3); WMNH-2018-INV-9 (
19 mm
x
7 mm
; Genbank accession numbers
LC
425502 for
COI
,
LC
425505 for H3)
Holotype
description.
Body form straight, posteriorly tapering. Live coloration yellow. dorsal podia short, papillae-like, restricted to radii in two longitudinal rows; ventral podia (pedicels), retractile, restricted to radii in three apparently zig-zag rows, absent anteriorly. In preserved state, anterior end expanded and posterior conspicuously contracted. Body wall soft, thin in anterior (<
0.5 mm
), thick in posterior (>1.0 mm); preserved coloration pure white (
Fig. 2A, B
); contracted length
62 mm
, width
17 mm
(see
Table 1
). Tentacles 10, dendritic, equal length, all tentacles arranged in a single circle (
Fig. 2F
), each with two tufts, subdivided basally (
Fig. 2
F’). Body form cylindrical, with five oral valves (
Fig. 2C
) and five radially arranged anal teeth, each accompanied by a pair of anal papillae lying in a circle outside of the anal teeth (
Fig.2D
). Tentacles and introvert are of same coloration as the adjoining body wall.
Calcareous ring low, stout, radial and interradial elements compact, not forming a mosaic and lacking posterior prolongations (
Fig. 3
). All plates sagittate, each with a posterior depression and anterior projection. The mid-ventral element
R
1
and adjoining two interradial elements
IR1
and
IR2
not fused, both
IR1
and
IR2
narrower than
RI
, both with sharper anterior projection (
Fig. 3
) but mid-dorsal interradial plate (
IR5)
with deepest posterior depression. Retractor muscles originate from respective longitudinal muscle at 20–30% of body length from anterior end, more anterior dorsally, and insert on anterior projection (
Fig. 3
) of corresponding radial plate.
Polian vesicle single, mid-ventral in position, in line with
RI,
fusiform in shape, narrowing distally (distal end 1/6–1/3 of vesicle length); stone canal also single, mid-dorsal in position, in line with
IR5
; madreporite brain-/coralshaped, on the left side of anterior portion of the dorsal mesentery (
Table 1
,
Fig. 2G, H
). Gonadal stolon attached anteriorly, gonad in two tufts, one on each side of dorsal mesentery, most tubules short, branched. Respiratory trees paired, larger tree situated on right side of body cavity, reaching about half body length. Smaller tree situated on left side, length approximately 1/5–1/4 of the right one. Small intestine extends from mid-dorsal region in line with
IR5
, turns towards the right dorsal interradius in line with
IR4
, passes along
IR4
to about 3/4 the body length and then extends anteriad to middle of body along interradius (
IR5)
before opening into the cloaca.
Body wall ossicles as an external layer of small (22–35 µm) x-framed hourglass ossicles (
Fig. 4F, G
,
Table 2
) and an inner layer of sparsely distributed, large (123–154 µm) dendriform rods (
Fig. 4 F, G
,
Table 2
), sometimes forming delicate plates. Buttons, thick plates, x-shaped ossicles and/or rosettes absent. Tentacle ossicles mostly large, thick rods (55–643 µm), distally branched or perforated by few small holes (
Fig. 4A
,
Table 2
). Peri-oral ossicles, sparse, occurring as small (39–49 µm) typical, simple cups and large (169–369 µm) spinous rods (
Fig. 4B
,
Table 2
). Ossicles of pharyngeal villi as large (78–251 µm) rods, with few distal perforations and/or branches, sometimes also with a medial third branch/arm (
Fig. 4C
,
Table 2
). Introvert ossicles also as small (26–31 µm), x-framed hourglasses (
Fig. 4D
,
Table 2
). Oral valve ossicles as mostly small (24–34 µm) hourglasses and medium to large (101–358 µm), often distorted or rod-derived supporting plates at tip of valve (
Fig. 4E
,
Table 2
). Ossicles of dorsal podia mostly small (24–34 µm) hourglasses and small to large (85–175 µm), irregular supporting plates at tip (
Fig. 4H
,
Table 2
). Ossicles of ventral podia, mostly small (24–39 µm) hourglasses, medium-sized (57–149 µm) terminal supporting plates and large (451–514 µm) endplate (
Fig. 4I
,
Table 2
). Peri-anal ossicles as small (16–32 µm) hourglasses. Anal papillae with medium-sized (85–175 µm), irregular supporting plates (
Fig. 4J
,
Table 2
). Ossicles were also detected in the basal part of ovary as medium-sized (78–163 µm), distally branched spinous or dendriform rods (
Fig. 4K
,
Table 2
).
FIGURE 2.
Satsumaocnus kaiyomarui
sp. nov.
A, B, C, D, G, and H, holotype (WMNH-2018-INV-3); E and F, paratype (WMNH-2018-INV-11). A, lateral view of live animal; B, lateral view of preserved specimen; C, frontal view with retracted tentacle; D, posterior view showing anus; E, paratype, preserved lateral view showing tentacles; F, paratype, frontal view showing tentacles, and lateral view showing tentacles (F’); G, holotype, internal view of anterior left side of body cavity; H, microphoto of madreporite and stone canal. (Abbreviations: ador, antero-dorsal region; ao, anus opening; ap, anal papilla; at, anal teeth; avent, antero-ventral region; calc, calcareous ring; dbw, dorsal body-wall; dp, dorsal podia; dtp, dorsalmost tentacle pairs; intes, intestine; intro, introvert; med, madreporite; mes, mesentery; oo, oral opening; pa, perianal skin; po, perioral skin; pdor, postero-dorsal Region; pvent, postero-ventral region; pv, pharyngeal villi; tent, tentacle; vtp, ventralmost tentacle pair; valve, oral valve; vbw, ventral body-wall; vp, ventral podia).
FIGURE 3.
Satsumaocnus kaiyomarui
sp. nov.
Outside view of calcareous ring of holotype (WMNH-2018-INV-3) of, showing plates of calcareous ring and internal organs as classified according to
Ludwig’s [1889
–1892 (1889), p156] system:
RI–RV
,
IR1–IR5
, namely,
radials (
R
)
:
RI
, medio-ventral;
RII
, left ventral;
RIII
, right ventral;
RIV
, left dorsal;
RV
, right dorsal; and
interradials (
IR
)
:
IR1
,left ventral;
IR2
, right ventral;
IR3
, left dorsolateral;
IR4
, right dorsolateral;
IR5
, mediodorsal. (Black triangles denote attachment points of retractor muscles).
Variations in
paratypes
.
Body form in life straight or slightly U-shaped, straight in preserved state. Contracted dimensions of the largest
paratype
(WMNH-INV-2018-4)
69 mm
x
24 mm
(
Table 1
). All
paratypes
with 10 equal tentacles in a single circle (
Fig. 2 F
), each tentacle basally divided into two large tufts. Except for five small specimens (WMNH-INV-
2018-9–13
), the posterior end of all specimens is strongly contracted. Polian vesicle always single, in
RI
, stone canal also single in
IR5
. calcareous ring low, stout, without posterior prolongations; oral valves present. All specimens possess abundant x-framed hourglasses in body-wall, but simple cups and scarce spinous rods in perioral skin lacking in some individuals (
Table 2
). Hourglasses absent in the introvert of several specimens (
Table 2
). In all specimens dendriform rods sparser in ventral body wall. Gonadal tubules (
Table 1
) absent in some specimens (perhaps due to immaturity). Other ossicles of the
paratypes
consistent with those of the
holotype
.
Distribution.
Known only from
type
locality.
Ecology/behaviour.
All individuals were observed basally attached with their posterior end, or this end was embedded in the sediment (pebbles and coral debris) (
Fig. 6A, B
). Most specimens were observed with their tentacles extended into the water column while feeding. (
Fig. 6C
). Sometimes animals were half-embedded in the sandy gravel bottom. Other movements were not observed (
Fig. 6D
).
TABLE 1.
Summary of measurements, accession numbers, and counts for type specimens of
Satsumaocnus kaiyomarui
sp. nov.
WMNH-INV a |
Coll. Date |
Station b |
Type |
Accession |
Gene |
Gonad |
Length |
Counts and measurements (mm) |
state |
No. |
state |
× width (mm) |
Stone canal |
Polian vesicle |
Counts & position c |
Madreporite diameter |
Counts & position c |
Length × width |
2018-3 |
Aug. 27, 2017 |
St. 22 |
Holotype |
- |
- |
ovary |
62 × 17 |
1—
IR5
|
0.47 |
1—
RI
|
4.5 × 2.2 |
2018-4 |
Aug. 18, 2017 |
St. 24 |
Paratype |
- |
- |
ovary |
69 × 24 |
1—
IR5
|
0.67 |
1—
RI
|
7.5 × 2.3 |
2018-5 |
Aug. 18, 2017 |
St. 24 |
Paratype |
- |
- |
immature |
58 × 20 |
1—
IR5
|
0.63 |
1—
RI
|
4.9 × 4.3 |
2018-6 |
Aug. 18, 2017 |
St. 24 |
Paratype |
- |
- |
immature |
42 × 12 |
1—
IR5
|
0.31 |
1—
RI
|
2.1 × 1.4 |
2018-7 |
Aug. 18, 2017 |
St. 24 |
Paratype |
LC425500 |
COI |
testis |
27 × 11 |
1—
IR5
|
0.43 |
1—
RI
|
5.6 × 2.3 |
LC425503 |
H3 |
2018-8 |
Aug. 18, 2017 |
St. 24 |
Paratype |
LC425501 |
COI |
immature |
21 × 9 |
not detected |
1—
RI
|
4.7 ×2.5 |
LC425504 |
H3 |
2018-9 |
Aug. 18, 2017 |
St. 24 |
Paratype |
LC425502 |
COI |
immature |
19 × 7 |
not detected |
1—
RI
|
1.6 × 1.3 |
LC425505 |
H3 |
2018-10 |
Aug. 18, 2017 |
St. 24 |
Paratype |
- |
- |
immature |
28 × 9 |
1—
IR5
|
0.27 |
1—
RI
|
2.3 × 1.8 |
2018-11 |
Aug. 18, 2017 |
St. 24 |
Paratype |
- |
- |
immature |
23 × 8 |
1—
IR5
|
0.23 |
1—
RI
|
1.1 × 0.4 |
2018-12 |
Aug. 18, 2017 |
St. 24 |
Paratype |
- |
- |
immature |
14 × 6 |
not detected |
1—
RI
|
2.3 × 0.6 |
2018-13 |
Aug. 18, 2017 |
St. 24 |
Paratype |
- |
- |
immature |
23 × 6 |
1—
IR5
|
0.29 |
1—
RI
|
3.6 × 1.6 |
a
Registration number, WMNH-INV: Invertebrate Collection (INV) of the Wakayama Prefectural Museum of Natural History (WMNH).
b
Localities for the expedition of
Fisheries Agency of Japan
in August, 2017, shown in Fig. 1
c
Positions classified by
Ludwig’s [1889
–1892 (1889), p156]: RI, medioventral; IR5, mediodorsal.
TABLE 2-1.
Measurements and range (Mean ± sd μm) of ossicles from type specimens of
Satsumaocnus kaiyomarui
sp. nov.
(1/3: Rod and/or dendriformed rod)
INV-2018-3 |
INV-2018-5 |
INV-2018-13 |
Body parts |
n
|
aLength |
bBreadth |
cWidth |
n
|
aLength |
bBreadth |
cWidth |
n
|
aLength |
bBreadth |
cWidth |
Tentacle |
22 |
285 ± 179 55–648 |
18 ± 9 3–33 |
- - |
24 |
208 ± 101 117–513 |
15 ± 6 7–28 |
- - |
24 |
186 ± 97 56–385 |
17 ± 9 4–34 |
- - |
Perioral skin |
6 |
244 ± 92 169–369 |
7 ± 2 5–10 |
48 ± 12 38–70 |
8 |
204 ± 38 124–243 |
40 ± 2 8–15 |
43 ± 11 33–62 |
0 |
Pharyngal villi |
8 |
183 ± 55 78–251 |
8 ± 3 4–12 |
41 ± 10 25–58 |
18 |
139 ± 35 84–193 |
7 ± 2 4–10 |
45 ± 19 15–105 |
9 |
128 ± 32 79–189 |
6 ± 1 4–7 |
43 ± 14 21–71 |
Introvert skin |
0 |
0 |
0 |
Valve |
0 |
0 |
0 |
Dorsal body-wall |
3 |
151 ± 4 147–154 |
7 ± 1 6–8 |
107 ± 15 91–120 |
4 |
181 ± 19 163–207 |
5 ± 1 4–6 |
108 ± 16 85–122 |
4 |
128 ± 7 118–133 |
4 ± 1 4–5 |
81 ± 18 59–102 |
Ventral body-wall |
3 |
128 ± 6 123–135 |
7 ± 1 6–8 |
75 ± 10 66–85 |
5 |
142 ± 45 87–181 |
4 ± 1 3–5 |
83 ± 16 63–98 |
3 |
117 ± 28 93–148 |
5 ± 1 4–6 |
63 ± 16 53–81 |
Ventral podia |
0 |
0 |
0 |
Endplate |
0 |
0 |
0 |
Dorsal podia |
0 |
0 |
0 |
Anal papilla |
0 |
0 |
0 |
Anal skin |
0 |
0 |
0 |
Gonad |
6 |
131 ± 29 78–163 |
4 ± 1 3–7 |
39 ± 30 10–88 |
Gonad undeveloped |
Gonad undeveloped |
Rod:
a
Length, a total length along with longitudinal line;
b
Breadth, a stem breadth at central region;
c
Width, a total width crossing to longitudinal line.
TABLE 2-2.
Measurements and range (Mean ± sd μm) of ossicles from type specimens of
Satsumaocnus kaiyomarui
sp. nov.
(2/3: single-faced and/or hourglass cup)
INV-2018-3 |
INV-2018-5 |
INV-2018-13 |
Body parts |
n
|
aLength |
bBreadth |
cHigh |
n
|
aLength |
bBreadth |
cHigh |
n
|
aLength |
bBreadth |
cHigh |
Tentacle |
0 |
0 |
0 |
Perioral skin |
4 |
43 ± 5 39–49 |
34 ± 1 33–35 |
- - |
0 |
0 |
Pharyngal villi |
0 |
0 |
0 |
Introvert skin |
10 |
29 ± 2 26–31 |
22 ± 3 18–27 |
27 27 |
0 |
7 |
31 ± 5 27–39 |
26 ± 3 22–30 |
28 28 |
Valve |
10 |
29 ± 4 24–34 |
24 ± 3 20–27 |
28 ± 5 19–34 |
12 |
32 ± 4 27-39 |
28 ± 4 23-36 |
33 ± 2 28-35 |
7 |
32 ± 2 28–34 |
28 ± 3 23–33 |
- - |
Dorsal body-wall |
19 |
30 ± 3 25–35 |
25 ± 3 21–29 |
34 ± 5 25–41 |
30 |
33 ± 5 26–43 |
30 ± 5 25–41 |
35 ± 5 27–45 |
22 |
34 ± 3 28–41 |
29 ± 4 24–35 |
35 ± 4 27–41 |
Ventral body-wall |
26 |
29 ± 3 22–35 |
26 ± 2 21–29 |
29 ± 3 24–32 |
35 |
30 ± 4 25–46 |
27 ± 5 18–39 |
30 ± 4 20–36 |
22 |
31 ± 3 25–36 |
27 ± 2 23–31 |
29 ± 8 17–39 |
Ventral podia |
29 |
29 ± 4 24–39 |
26 ± 3 21–31 |
27 ± 4 21–35 |
26 |
29 ± 4 22–35 |
24 ± 3 19–32 |
25 ± 3 19–31 |
14 |
32 ± 3 26–38 |
28 ± 3 24–33 |
29 ± 3 25–32 |
Endplate |
Dorsal podia |
13 |
31 ± 3 27–36 |
25 ± 4 17–30 |
31 ± 4 24–35 |
20 |
32 ± 3 24–39 |
27 ± 4 23–35 |
36 ± 6 27–48 |
29 |
32 ± 4 26–40 |
27 ± 4 21–36 |
33 ± 5 21–41 |
Anal papilla |
0 |
0 |
0 |
Anal skin |
8 |
25 ± 5 16–32 |
25 ± 3 23–28 |
25 ± 3 19–28 |
7 |
27 ± 3 24–32 |
22 ± 1 22–23 |
24 ± 4 18–29 |
19 |
34 ± 7 26–57 |
28 ± 3 23–33 |
30 ± 4 26–36 |
Gonad |
0 |
0 |
0 |
Cup:
a
Length, a long side of lectangle rim;
b
Breadth, a short side of lectangle rim;
c
High, a distance between upper edge of upside rim and belower edge of downside rim. In all three directions, spinneret and/or process were omitted from the measurement. Among the three directions, one vertical direction was omitted from the measurement.