Description of BOLeODOruS buShehreNSIS n. sp. (Rhabditida: Tylenchidae) from Southern Iran, and Observations on a Commonly Known Species
Author
Monemi, Somayeh
Department of Plant Pathology, Faculty of Agriculture, Tarbiat Modares University, Tehran, Iran
Author
Atighi, Mohammad Reza
Department of Plant Pathology, Faculty of Agriculture, Tarbiat Modares University, Tehran, Iran
Author
Abolafia, Joaquín
Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus Las Lagunillas, s / n, 23071, Jaén, Spain
Author
Pourjam, Ebrahim
Department of Plant Pathology, Faculty of Agriculture, Tarbiat Modares University, Tehran, Iran
Author
Pedram, Majid
Department of Plant Pathology, Faculty of Agriculture, Tarbiat Modares University, Tehran, Iran
majid.pedram@modares.ac.ir
text
Journal of Nematology
2022
2022-04-17
54
1
1
13
http://dx.doi.org/10.2478/jofnem-2022-0004
journal article
298701
10.2478/jofnem-2022-0004
48aee40b-1fb2-4b00-ad94-b6993a0b5faa
2640-396X
11644623
Boleodorus bushehrensis
n. SP.
The morphological characters of
B. bushehrensis
n. sp.
are represented in
Figures 1–3
.
For the measurements of
B. bushehrensis
n. sp.
, see
Table 1
.
Description
Female
Body is short, open C-shaped after fixation, gradually narrowing toward both extremities. Cuticle with fine, transverse annules, being stronger at the distal region of the tail. Lateral fields show four lines, sometimes with irregular additional lines under SEM; the outer lines are plain. Cephalic region low and continuous with the adjacent body. The SEM and light microscopic observations show that the oral aperture is placed in a depression. SEM images further revealed that the cephalic region is annulated; the amphidial openings are short crescent-shaped slits, and four large cephalic papillae are present. Stylet is fine, the conus is shorter than the shaft, and the knobs are small and posteriorly directed. The pharyngeal dorsal gland orifice (DGO) is positioned posterior to the knobs at less-than-half-stylet length. Pharyngeal procorpus is slender; metacorpus is slightly swollen, with vestigial-to-invisible valve plates in the shape of two small roads; isthmus is narrow and slender; and the pharyngeal bulb is pyriform, with usually one visible nucleus. The excretory pore is located at the middle of the pharyngeal bulb or in a position slightly anterior to it. The hemizonid is indistinct. The nerve ring surrounds the anterior part of the isthmus; the cardia is small and hemispherical. Intestine is simple; rectum and anus are functional. The reproductive system is monodelphic–prodelphic, composed of an outstretched ovary, oocytes arranged in a single row, a poorly discernible apparently tubular oviduct, and rounded, offset, and functional spermatheca filled with spheroid sperm cells. Crustaformeria is with unclear cell arrangement; the uterus is simple, and the vagina is perpendicular to the body axis, straight or slightly anteriorly sloping. The postvulval uterine sac (PUS) is about as long as the vulval body diameter. Tail is conical, and usually, its distal region is ventrally curved, forming a hook; in some specimens, it is concave on the ventral side, and its tip is finely or widely rounded.
Figure 2: Light microphotographs of
Boleodorus bushehrensis
n. sp.
(A, B, C, E, F, I, J, K: female; D, G, H: male). (A, B) Anterior region showing cephalic region and stylet, respectively.
(C) Pharyngeal metacorpus. (D) Anterior body region showing the oral aperture in a depression. (E, J) Pharyngeal bulb region showing excretory pore. (F, G, I) Tail tip. (H) Bursa. (K) Lateral field at midbody. (All scale bars = 10 Mm).
Figure 3: Scanning electron microphotographs of
Boleodorus bushehrensis
n. sp.
(female).
(A) Anterior body region showing beginning of lateral field (arrow showing the excretory pore). (B–D) Anterior end in ventrolateral, ventral, and
en face
views, respectively (arrows pointing to the amphidial openings). (E, F) Excretory pore in lateral and ventral views, respectively (arrow).
(G) Lateral field at vulva. (H, I) Vulva in lateral and ventral views, respectively. (J) Anterior body region in ventral view showing excretory pore. (K,N) Lateral field at midbody showing unusual division and four incisures, respectively. (L,M) Anus in ventral and lateral views, respectively.
Male
Males are rare and functional (sperm observed inside females’ spermatheca). They are similar to females in general morphology, except in sexual characters. Spicules are tylenchoid, slender, and arcuate. Gubernaculum is simple and small. Tail is similar to that of females. Bursa is adcloacal and small, with smooth margin.
Diagnosis and relationships
The new species is mainly characterized by having a wide and low cephalic region continuous with the adjacent body, annulated in SEM observations; the oral aperture is in a depression in both light and SEM microscopy studies. Short crescent-like amphidial slits are found on SEM analysis; four lines are present in the lateral field, and tail is hooked, short, 26- to 38- µm long with a rounded tip. The new species is further characterized by having 334- to 464-Mm-long females, a weakly developed metacorpus with vestigial-to-invisible valve, and offset spherical spermatheca filled with spheroid sperm; males are present, having 11.5- to 12.0-Mm-long spicules and weakly developed bursa. By having a wide, continuous, and annulated cephalic region and short tail, the new species is unique in the genus. It is compared with seven known species of the genus having a conical tail and four lines in the lateral field, namely,
B. acutus
Thome and Malek, 1968
,
B. azadkashmirensis
Maqbool, Shahina, and Firoza, 1990
,
B. citri
Edward and Rai, 1970
,
B. cynodoni
Fotedar and Mahajan, 1974
,
B. modicus
Lal and Khan, 1988
,
B. neosimilis
Geraert, 1971
, and
B. volutus
Lima and Siddiqi, 1963
. The comparison of the new species with the aforementioned species is as follows.
Table 1. Morphometrics of
Boleodorus bushehrensis
n. sp.
Characteristics |
Holotype
|
Paratypes
|
Females |
Males
|
n |
13 |
3 |
L |
449 |
412 ± 35.5 |
432 ± 17 |
(334–464) |
(417–450) |
L’ |
413 |
379 ± 34 |
399 ± 16 |
(298–432) |
(385–416) |
a |
34 |
32.5 ± 3.0 |
39.8 ± 2.5 |
(27.8–37.4) |
(37.2–42.0) |
b |
4.8 |
4.8 ± 0.5 |
5.0 ± 0.5 |
(4–6) |
(4.3–5.4) |
c |
12 |
12.6 ± 1.5 |
13.1 ± 0.1 |
(9.3–15.8) |
(12.9–13.0) |
c’ |
4.9 |
3.9 ± 0.5 |
4.1 ± 0.1 |
(2.9–4.9) |
(4.0–4.3) |
V or T |
79 |
74.8 ± 1.9 |
– |
(70.8–79.5) |
V’ |
80.7 |
80.9 ± 1.2 |
– |
(77.5–82.0) |
Cephalic region height |
2.3 |
2.1 ± 0.3 |
2.1 ± 0.4 |
(1.7–2.6) |
(1.8–2.7) |
Cephalic region width |
6.5 |
5.9 ± 0.6 |
6.1 ± 0.4 |
(5.0–6.7) |
(5.6–6.5) |
Stylet length |
8 |
8.7 ± 0.4 |
9.7 ± 0.3 |
(8.0–9.3) |
(9.5–10.0) |
Conus length |
3 |
3.2 ± 0.2 |
3.3 ± 0.3 |
(3.0–3.5) |
(3.0–3.5) |
m |
37.5 |
36.8 ± 3.4 |
33.6 ± 2.3 |
(32.3–42.7) |
(31.5–36.0) |
DGO |
3 |
3.1 ± 0.2 |
3.0 ± 0.07 |
(2.8–3.5) |
(2.9–3.0) |
Distance from excretory pore to anterior end |
78.5 |
69.5 ± 5.2 |
63.9 ± 1.6 |
(64–79) |
(62–65) |
MB |
48.2 |
55.8 ± 12.1 |
57.8 (n=1) |
(43.0–82.3) |
Pharynx length |
91 |
87 ± 7 |
87.7 ± 7.5 |
(73–99) |
(80–95) |
Distance from anterior end to vulva |
333 |
307 ± 28 |
– |
(245–347) |
BW |
12 |
12.7 ± 1.3 |
10.8 ± 0.3 |
(12–15) |
(10.6–11.0) |
(Continued)
Table 1: Continued
Characteristics |
Holotype
|
Paratypes
|
Females |
Males
|
Anal BW |
9 |
8.6 ± 0.6 |
8.7 ± 0.9 |
(7–9) |
(8–9) |
Vulva–anus (V–A) distance |
80 |
72.2 ± 8.5 |
– |
(54–84) |
PUS length |
11.5 |
10.6 ± 1.3 |
– |
(8.2–12.0) |
Tail/V–A |
0.5 |
0.5 ± 0.07 |
– |
(0.4–0.7) |
PUS/BW |
1 |
0.8 ± 0.07 |
– |
(0.7–1.0) |
Tail length |
36 |
33 ± 3 |
32.5 ± 0.7 |
(26–38) |
(32–33) |
Spicules length |
– |
– |
11.5 ± 0.4 |
(11.5–12.0) |
Gubernaculum length |
– |
– |
4.5 ± 0.2 |
(4–5) |
Bursa length |
– |
– |
6.3 ± 0.5 |
(6–7) |
All measurements are in micrometers and in the form: mean ± SD (range).
BW, body width; DGO, dorsal gland opening; PUS, postvulval uterine sac; SD, standard deviation.
Compared to
B. acutus
,
it has a shorter body length (412 [334–464] Mm vs 500 Mm), wide and low cephalic region (vs narrower and higher,according to the original drawings), shorter stylet (8.7 [8.0–9.3] Mm vs 13 Mm), shorter pharynx (87 [73–99] Mm vs 114 Mm), greater c value (12.6 [9.3–15.8] vs 8), greater V value (74.8 [70.8–79.5] vs 67), and shorter tail (33 [26–38] Mm vs 63 Mm).
It differs from
B. azadkashmirensis
by the presence of a continuous, wide, and low cephalic region (vs narrower and high), shorter stylet (8.7 [8.0–9.3] Mm vs 10.5–12.0 Mm), presence vs absence of a vestigial valve in the median bulb, a shorter pharynx (87 [73–99] Mm vs 96 Mm), greater V value (74.8 [70.8–79.5] vs 63.5–67.5), greater c value (12.6 [9.3–15.8] vs 7–8), and shorter tail (33 [26–38] Mm vs 60 Mm) not ending in a ventrally curved tip (vs ventrally curved).
Figure 4: Bayesian 50% majority rule consensus tree inferred from the SSU rDNA of
Boleodorus bushehrensis
n. sp.
under the GTR + G + I model. Bayesian posterior probability values are given for corresponding clades. The new species is in bold font. GTR, general time-reversible; G, gamma; I, invariant; rDNA, ribosomal DNA; SSU, small subunit.
It can be distinguished from
B. citri
by having a C-shaped (vs spiral) longer body (412 [334–464] Mm vs 280–310 Mm), wide and lower cephalic region (vs narrow and higher, according to the original drawings), shorter stylet (8.7 [8.0–9.3] Mm vs 9.0–10.5 Mm), posteriorly located excretory pore (69.5 [64–79] Mm vs 55–61 Mm from anterior body end), greater a value (32.5 [27.8–37.4] vs 21–23), greater MB (55.8 [43.0– 82.3] vs 35), greater V value (74.8 [70.8–79.5] vs 64– 68), and shorter tail (33 [26–38] Mm vs 51–82 Mm).
It differs from
B. cynodoni
by the shorter body length (412 [334–464] Mm vs 420–490 Mm), greater V value (74.8 [70.8– 79.5] vs 62–65), and shorter tail (33 [26–38] Mm vs 54 Mm).
It differs from
B. modicus
by having a C-shaped (vs spiral) body, wide cephalic region at the apex (vs narrower), greater c value (12.6 [9.3–15.8] vs 7.7–9.8), greater V value (74.8 [70.8–79.5] vs 66–71), and shorter tail (33 [26–38] Mm vs 51 Mm).
It is different from
B. neosimilis
by having a wider cephalic region at the apex (vs narrower), a greater V value (74.8 [70.8–79.5] vs 68), a shorter tail (33 [26–38] Mm vs 51 Mm), and shorter spicules (11.5 [11.5–12.0] Mm vs 14 Mm).
The new species differs from
B. volutus
by having a C-shaped body (vs spiral), a slightly shorter body length (412 [334–464] Mm vs 390–510 Mm), a wider cephalic region at the apex (vs narrower), presence of a vestigial valve in the metacorpus (vs absence), shorter pharynx (87 [73–99] Mm vs 92–104 Mm), and shorter tail (33 [26–38] Mm vs 35–60 Mm).
Type
habitat and locality
The new species was recovered from a soil sample collected from the rhizosphere of wheat in
Shah Firouz
village (south of Dashtestan),
Bushehr Province
, southern
Iran
, on
30 January 2021
. The global positioning system (GPS) coordinates are
29°32.316´N
and
50°54.303´E
.
Figure 5: Continued
Figure 5: Bayesian 50% majority rule consensus tree inferred from the LSU rDNA D2–D3 sequences of
Boleodorus bushehrensis
n. sp.
under the GTR + G + I model. Bayesian posterior probability values are given for the corresponding clades. The new species is in bold font. GTR, general time-reversible; G, gamma; I, invariant; LSU, large subunit; rDNA, ribosomal DNA.
Type
material
Holotype
female
,
10
to
13
paratype
females
, and
three
paratype
males
were deposited at the Nematology Collection of the Faculty of Agriculture, Tarbiat Modares University, Tehran, Iran.
Etymology
The specific epithet refers to the
Bushehr Province
, where the new species was found.
Molecular phylogenetic analyses
Sequencing of the SSU and LSU rDNA D2– D3 fragments of the new species yielded a single 1,242-nt-long SSU (accession number OK018183); and two 517- and 584-nt-long LSU sequences (accession numbers OK018176 and OK018177). The BLAST search using the newly generated SSU sequence revealed a 98.00%– 98.79% identity with nine sequences assigned to
B. thylactus
(KJ869348, KJ869350, AY993976, AY593915, KJ869349, MW716329, MK639397, MK639396, and MW716330). Its identity with the sequence assigned to
B. volutus
(FJ969117) was 98%. In the SSU phylogenetic tree (
Fig. 4
), the DNA sequences of
Boleodorinae
formed a poorly supported clade (Clade A, 0.77 Bayesian posterior probability [BPP]). The DNA sequences representing
Boleodorus
formed a major clade, and the sequences assigned to
B. thylactus
occupied different placements in this tree. The new species formed a poorly supported clade (0.76 BPP) with five sequences assigned to
B. thylactus
(MW716330, MW716329, MZ081056, MZ081059, and MZ081057).
The BLAST search using the LSU sequence of the new species (OK018177) revealed that its identity with all currently available LSU sequences of
Tylenchidae
is <96% (the highest identity was 95.02%, belonging to
Boleodorus
sp.
[JQ005002]). The DNA sequences of
Boleodorinae
(for phylogenetic status of
Atetylenchus
Khan, 1973
, see the Discussion section) formed a maximally supported clade in the LSU tree (
Fig. 5
, clade B). Sequences of
Boleodorus
formed a clade; however, several sequences assigned to
B. thylactus
occupied different placements. The relationships of the new species with six sequences (JQ005002, MW056183, JQ005021, DQ328718, MK639377, and MK639378) have not been resolved due to polytomy.