plazi/treatments-xml
2
0
Fork 0
Code Issues Releases Activity

added A4

Browse source
This commit is contained in:
maintenance 2024-06-21 12:46:29 +02:00
parent a680bc417b
commit e78723fd2d
1330 changed files with 285316 additions and 0 deletions
Download patch file Download diff file Expand all files Collapse all files

311
data/A4/D5/2B/A4D52B9B0B9F562A98A49C5C6DB8B6F7.xml Normal file
View file

@ -0,0 +1,311 @@
<document ID-DOI="http://dx.doi.org/10.3897/mycokeys.85.76040" ID-GBIF-Dataset="14dd6ede-1daf-40f2-80cc-25cb4e89ccf9" ID-PMC="PMC8683392" ID-Pensoft-Pub="1314-4049-85-73" ID-Pensoft-UUID="C42173B3D9525EC1B9EBA1E91F2639D4" ID-PubMed="35002371" ModsDocID="1314-4049-85-73" checkinTime="1639196395864" checkinUser="pensoft" docAuthor="Dou *, Ming-Zhu, Li *, Min &amp; Jia, Ze-Feng" docDate="2021" docId="A4D52B9B0B9F562A98A49C5C6DB8B6F7" docLanguage="en" docName="MycoKeys 85: 73-85" docOrigin="MycoKeys 85" docPubDate="2021-12-10" docSource="http://dx.doi.org/10.3897/mycokeys.85.76040" docTitle="Chapsa wolseleyana Weerakoon, Lumbsch &amp; Luecking, in Weerakoon, Rivas Plata, Lumbsch &amp; Luecking, Lichenologist 44 (3): 377 2012" docType="treatment" docVersion="4" id="C42173B3D9525EC1B9EBA1E91F2639D4" lastPageNumber="73" masterDocId="C42173B3D9525EC1B9EBA1E91F2639D4" masterDocTitle="New species and records of Chapsa (Graphidaceae) in China" masterLastPageNumber="85" masterPageNumber="73" pageNumber="73" updateTime="1668136771772" updateUser="ExternalLinkService">
<mods:mods xmlns:mods="http://www.loc.gov/mods/v3">
<mods:titleInfo>
<mods:title>New species and records of Chapsa (Graphidaceae) in China</mods:title>
</mods:titleInfo>
<mods:name type="personal">
<mods:role>
<mods:roleTerm>Author</mods:roleTerm>
</mods:role>
<mods:namePart>Dou *, Ming-Zhu</mods:namePart>
<mods:affiliation>College of Life Sciences, Liaocheng University, Liaocheng 252059, China</mods:affiliation>
</mods:name>
<mods:name type="personal">
<mods:role>
<mods:roleTerm>Author</mods:roleTerm>
</mods:role>
<mods:namePart>Li *, Min</mods:namePart>
<mods:affiliation>College of Life Sciences, Liaocheng University, Liaocheng 252059, China</mods:affiliation>
</mods:name>
<mods:name type="personal">
<mods:role>
<mods:roleTerm>Author</mods:roleTerm>
</mods:role>
<mods:namePart>Jia, Ze-Feng</mods:namePart>
<mods:affiliation>College of Life Sciences, Liaocheng University, Liaocheng 252059, China</mods:affiliation>
<mods:nameIdentifier type="email">zfjia2008@163.com</mods:nameIdentifier>
</mods:name>
<mods:typeOfResource>text</mods:typeOfResource>
<mods:relatedItem type="host">
<mods:titleInfo>
<mods:title>MycoKeys</mods:title>
</mods:titleInfo>
<mods:part>
<mods:date>2021</mods:date>
<mods:detail type="pubDate">
<mods:number>2021-12-10</mods:number>
</mods:detail>
<mods:detail type="volume">
<mods:number>85</mods:number>
</mods:detail>
<mods:extent unit="page">
<mods:start>73</mods:start>
<mods:end>85</mods:end>
</mods:extent>
</mods:part>
</mods:relatedItem>
<mods:location>
<mods:url>http://dx.doi.org/10.3897/mycokeys.85.76040</mods:url>
</mods:location>
<mods:classification>journal article</mods:classification>
<mods:identifier type="DOI">http://dx.doi.org/10.3897/mycokeys.85.76040</mods:identifier>
<mods:identifier type="Pensoft-Pub">1314-4049-85-73</mods:identifier>
<mods:identifier type="Pensoft-UUID">C42173B3D9525EC1B9EBA1E91F2639D4</mods:identifier>
</mods:mods>
<treatment ID-GBIF-Taxon="191263871" LSID="urn:lsid:plazi:treatment:A4D52B9B0B9F562A98A49C5C6DB8B6F7" httpUri="http://treatment.plazi.org/id/A4D52B9B0B9F562A98A49C5C6DB8B6F7" lastPageNumber="73" pageId="0" pageNumber="73">
<subSubSection pageId="0" pageNumber="73" type="nomenclature">
<paragraph pageId="0" pageNumber="73">
<taxonomicName LSID="A4D52B9B-0B9F-562A-98A4-9C5C6DB8B6F7" authority="Weerakoon, Lumbsch &amp; Luecking, in Weerakoon, Rivas Plata, Lumbsch &amp; Luecking, Lichenologist 44 (3): 377 (2012)" authorityName="Weerakoon, Lumbsch &amp; Luecking, in Weerakoon, Rivas Plata, Lumbsch &amp; Luecking, Lichenologist 44 (3): 377" authorityYear="2012" class="Basidiomycetes" family="Graphidaceae" genus="Chapsa" higherTaxonomySource="treatment-meta" kingdom="Fungi" lsidName="Chapsa wolseleyana" order="Ostropales" pageId="0" pageNumber="73" phylum="Ascomycota" rank="species" species="wolseleyana">
Chapsa wolseleyana Weerakoon, Lumbsch &amp;
<normalizedToken originalValue="Lücking">Luecking</normalizedToken>
, in Weerakoon, Rivas Plata, Lumbsch &amp;
<normalizedToken originalValue="Lücking">Luecking</normalizedToken>
, Lichenologist 44(3): 377 (2012)
</taxonomicName>
</paragraph>
</subSubSection>
<subSubSection pageId="0" pageNumber="73" type="description">
<paragraph pageId="0" pageNumber="73">
<figureCitation captionStart="Figure 3" captionStartId="F3" captionText="Figure 3. Chapsa wolseleyana (LCUF FJ 19148 - b) A habit of thallus with apothecia B apothecia at different developmental stages C apothecium (part of pruina scraped off) D section of apothecium with periphysoids (direction of arrow) E paraphyses F young and mature ascospores. Scale bars: 1.5 mm (A); 1 mm (B); 0.25 mm (C); 120 μm (D); 10 μm (E); 25 μm (F)." figureDoi="10.3897/mycokeys.85.76040.figure3" httpUri="https://binary.pensoft.net/fig/621465" pageId="0" pageNumber="73">Figure 3</figureCitation>
</paragraph>
</subSubSection>
<subSubSection pageId="0" pageNumber="73" type="reference_group">
<paragraph pageId="0" pageNumber="73">
<taxonomicName class="Lecanoromycetes" family="Graphidaceae" genus="Astrochapsa" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Astrochapsa wolseleyana" order="Ostropales" pageId="0" pageNumber="73" phylum="Ascomycota" rank="species" species="wolseleyana">Astrochapsa wolseleyana</taxonomicName>
(Weerakoon, Lumbsch &amp;
<normalizedToken originalValue="Lücking">Luecking</normalizedToken>
) Parnmen,
<normalizedToken originalValue="Lücking">Luecking</normalizedToken>
&amp; Lumbsch, in Parnmen et al., PLoS ONE 7(12): 10 (2012)
</paragraph>
</subSubSection>
<subSubSection pageId="0" pageNumber="73" type="description">
<paragraph pageId="0" pageNumber="73">Description.</paragraph>
<paragraph pageId="0" pageNumber="73">
Thallus crustose, corticolous, grey-brown, surface dull to slightly shiny, uneven, fissured. Apothecia erumpent, dispersed, sometimes two or three fused, mostly rounded to seldom slightly angular, 0.7-1.2 mm diam.; thalline margin raised to lobulate, lobes erected to recurved, inner part brown, covered with rose-red or white pruina; disc exposed, rose-red, covered with thick, rose-red pruina. Exciple fused, cupular, laterally 180-250
<normalizedToken originalValue="μm">μm</normalizedToken>
wide, yellowish-brown to brown; epihymenium rose-red with granules, 20-50
<normalizedToken originalValue="μm">μm</normalizedToken>
high, K+ green; hymenium 140-230
<normalizedToken originalValue="μm">μm</normalizedToken>
high, clear, colourless, non-amyloid; hypothecium indistinct; paraphyses septate, tips rose-red and moniliform with oval or rectangular cells; periphysoides present, 50-100
<normalizedToken originalValue="μm">μm</normalizedToken>
long. Asci clavate, 1-spored, 110-135
<normalizedToken originalValue="×">x</normalizedToken>
35-50
<normalizedToken originalValue="μm">μm</normalizedToken>
; ascospores densely muriform, oblong-ellipsoid, with hemispherical to roundish ends, 105-130
<normalizedToken originalValue="×">x</normalizedToken>
30-45
<normalizedToken originalValue="μm">μm</normalizedToken>
, first reddish, becoming hyaline to slightly olive-brown at maturity, I-. Pycnidia not observed.
</paragraph>
<caption doi="10.3897/mycokeys.85.76040.figure3" httpUri="https://binary.pensoft.net/fig/621465" pageId="0" pageNumber="73" start="Figure 3" startId="F3">
<paragraph pageId="0" pageNumber="73">
<emphasis bold="true" pageId="0" pageNumber="73">Figure 3.</emphasis>
<taxonomicName authorityName="Weerakoon, Lumbsch &amp; Luecking, in Weerakoon, Rivas Plata, Lumbsch &amp; Luecking, Lichenologist 44 (3): 377" authorityYear="2012" class="Basidiomycetes" family="Graphidaceae" genus="Chapsa" kingdom="Fungi" lsidName="Chapsa wolseleyana" order="Ostropales" pageId="0" pageNumber="73" phylum="Ascomycota" rank="species" species="wolseleyana">
<emphasis italics="true" pageId="0" pageNumber="73">Chapsa wolseleyana</emphasis>
</taxonomicName>
(LCUF FJ19148-b)
<emphasis bold="true" pageId="0" pageNumber="73">A</emphasis>
habit of thallus with apothecia
<emphasis bold="true" pageId="0" pageNumber="73">B</emphasis>
apothecia at different developmental stages
<emphasis bold="true" pageId="0" pageNumber="73">C</emphasis>
apothecium (part of pruina scraped off)
<emphasis bold="true" pageId="0" pageNumber="73">D</emphasis>
section of apothecium with periphysoids (direction of arrow)
<emphasis bold="true" pageId="0" pageNumber="73">E</emphasis>
paraphyses
<emphasis bold="true" pageId="0" pageNumber="73">F</emphasis>
young and mature ascospores. Scale bars: 1.5 mm (
<emphasis bold="true" pageId="0" pageNumber="73">A</emphasis>
); 1 mm (
<emphasis bold="true" pageId="0" pageNumber="73">B</emphasis>
); 0.25 mm (
<emphasis bold="true" pageId="0" pageNumber="73">C</emphasis>
); 120
<normalizedToken originalValue="μm">μm</normalizedToken>
(
<emphasis bold="true" pageId="0" pageNumber="73">D</emphasis>
); 10
<normalizedToken originalValue="μm">μm</normalizedToken>
(
<emphasis bold="true" pageId="0" pageNumber="73">E</emphasis>
); 25
<normalizedToken originalValue="μm">μm</normalizedToken>
(
<emphasis bold="true" pageId="0" pageNumber="73">F</emphasis>
).
</paragraph>
</caption>
</subSubSection>
<subSubSection pageId="0" pageNumber="73" type="chemistry">
<paragraph pageId="0" pageNumber="73">Chemistry.</paragraph>
<paragraph pageId="0" pageNumber="73">No substances detected by TLC but apothecial disc with pigment producing K+ yellow-green efflux, suggesting presence of isohypocrelline.</paragraph>
</subSubSection>
<subSubSection pageId="0" pageNumber="73" type="ecology">
<paragraph pageId="0" pageNumber="73">Ecology and distribution.</paragraph>
<paragraph pageId="0" pageNumber="73">
Growing on bark exposed to wind and high light intensity in montane forests. Worldwide distribution: Sri Lanka (
<bibRefCitation DOI="https://doi.org/10.1017/S0024282911000892" author="Weerakoon, G" journalOrPublisher="The Lichenologist" pageId="0" pageNumber="73" pagination="373 - 379" refId="B29" refString="Weerakoon, G, Rivas, Plata, Lumbsch, HT, Luecking, R, 2012. Three new species of Chapsa (lichenized Ascomycota: Ostropales: Graphidaceae) from tropical Asia. The Lichenologist 44 (3): 373 - 379, DOI: https://doi.org/10.1017/S0024282911000892" title="Three new species of Chapsa (lichenized Ascomycota: Ostropales: Graphidaceae) from tropical Asia." url="https://doi.org/10.1017/S0024282911000892" volume="44" year="2012">Weerakoon et al. 2012</bibRefCitation>
) and newly reported for China.
</paragraph>
</subSubSection>
<subSubSection pageId="0" pageNumber="73" type="materials_examined">
<paragraph pageId="0" pageNumber="73">Selected specimens examined.</paragraph>
<paragraph pageId="0" pageNumber="73">
<materialsCitation accessionNumber="MW009106, MW010270, MW010279" collectingDate="2019-07-05" collectorName="F. Y. Liu" country="China" county="Quanzhou City" elevation="1540" latitude="25.715834" location="Reflecting Pool" longLatPrecision="21" longitude="118.12056" municipality="Jiuxian Mountain" specimenCount="1" stateProvince="Fujian Province">
<collectingCountry name="China">China</collectingCountry>
.
<collectingRegion country="China" name="Fujian">Fujian Province</collectingRegion>
:
<collectingCounty>Quanzhou City</collectingCounty>
,
<collectingMunicipality>Jiuxian Mountain</collectingMunicipality>
,
<location LSID="urn:lsid:plazi:treatment:A4D52B9B0B9F562A98A49C5C6DB8B6F7:76584B58D6D0BD41D8F876F125C58C06" country="China" county="Quanzhou City" latitude="25.715834" longLatPrecision="21" longitude="118.12056" municipality="Jiuxian Mountain" name="Reflecting Pool" stateProvince="Fujian Province">Reflecting Pool</location>
,
<geoCoordinate degrees="25" direction="north" minutes="42" orientation="latitude" precision="15" seconds="57" value="25.715834">25°42'57&quot;N</geoCoordinate>
,
<geoCoordinate degrees="118" direction="east" minutes="07" orientation="longitude" precision="15" seconds="14" value="118.12056">118°07'14&quot;E</geoCoordinate>
, alt.
<quantity metricMagnitude="3" metricUnit="m" metricValue="1.54" unit="m" value="1540.0">
<elevation metricMagnitude="3" metricUnit="m" metricValue="1.54" unit="m" value="1540.0">1540 m</elevation>
</quantity>
, on bark,
<collectingDate value="2019-07-05">5 Jul 2019</collectingDate>
,
<collectorName>F.Y. Liu</collectorName>
FJ19148-b (LCUF) (GenBank
<accessionNumber httpUri="http://www.ncbi.nlm.nih.gov/nucleotide/MW009106">MW009106</accessionNumber>
for ITS,
<accessionNumber httpUri="http://www.ncbi.nlm.nih.gov/nucleotide/MW010270">MW010270</accessionNumber>
for LSU and
<accessionNumber httpUri="http://www.ncbi.nlm.nih.gov/nucleotide/MW010279">MW010279</accessionNumber>
for SSU)
</materialsCitation>
;
<materialsCitation accessionNumber="MW009078, MW010273, MW010277" collectingDate="2019-07-25" collectorName="F. Y. Liu" country="China" county="Quanzhou City" elevation="1460" latitude="25.712223" location="Natural Observation Path" longLatPrecision="21" longitude="118.12139" municipality="Jiuxian Mountain" specimenCount="1" stateProvince="Fujian Province">
<collectingCountry name="China">China</collectingCountry>
.
<collectingRegion country="China" name="Fujian">Fujian Province</collectingRegion>
:
<collectingCounty>Quanzhou City</collectingCounty>
,
<collectingMunicipality>Jiuxian Mountain</collectingMunicipality>
,
<location LSID="urn:lsid:plazi:treatment:A4D52B9B0B9F562A98A49C5C6DB8B6F7:033D24871237B4E8BE25710B7FE583C5" country="China" county="Quanzhou City" latitude="25.712223" longLatPrecision="21" longitude="118.12139" municipality="Jiuxian Mountain" name="Natural Observation Path" stateProvince="Fujian Province">Natural Observation Path</location>
,
<geoCoordinate degrees="25" direction="north" minutes="42" orientation="latitude" precision="15" seconds="44" value="25.712223">25°42'44&quot;N</geoCoordinate>
,
<geoCoordinate degrees="118" direction="east" minutes="07" orientation="longitude" precision="15" seconds="17" value="118.12139">118°07'17&quot;E</geoCoordinate>
, alt.
<quantity metricMagnitude="3" metricUnit="m" metricValue="1.46" unit="m" value="1460.0">
<elevation metricMagnitude="3" metricUnit="m" metricValue="1.46" unit="m" value="1460.0">1460 m</elevation>
</quantity>
, on bark,
<collectingDate value="2019-07-25">25 Jul 2019</collectingDate>
,
<collectorName>F.Y. Liu</collectorName>
FJ19158 (LCUF) (GenBank
<accessionNumber httpUri="http://www.ncbi.nlm.nih.gov/nucleotide/MW009078">MW009078</accessionNumber>
for ITS,
<accessionNumber httpUri="http://www.ncbi.nlm.nih.gov/nucleotide/MW010273">MW010273</accessionNumber>
for LSU and
<accessionNumber httpUri="http://www.ncbi.nlm.nih.gov/nucleotide/MW010277">MW010277</accessionNumber>
for SSU)
</materialsCitation>
.
<materialsCitation accessionNumber="MW009078, MW010273, MW010277" collectingDate="2019-07-25" collectorName="F. Y. Liu" country="China" county="Quanzhou City" elevation="1540" latitude="25.715834" location="Reflecting Pool" longLatPrecision="21" longitude="118.12056" municipality="Jiuxian Mountain" specimenCount="1" stateProvince="Fujian Province">
<collectingCountry name="China">China</collectingCountry>
.
<collectingRegion country="China" name="Fujian">Fujian Province</collectingRegion>
:
<collectingCounty>Quanzhou City</collectingCounty>
,
<collectingMunicipality>Jiuxian Mountain</collectingMunicipality>
,
<location LSID="urn:lsid:plazi:treatment:A4D52B9B0B9F562A98A49C5C6DB8B6F7:A66285A9CB16D7FDB2D68C221BA6E57C" country="China" county="Quanzhou City" latitude="25.715834" longLatPrecision="21" longitude="118.12056" municipality="Jiuxian Mountain" name="Reflecting Pool" stateProvince="Fujian Province">Reflecting Pool</location>
,
<geoCoordinate degrees="25" direction="north" minutes="42" orientation="latitude" precision="15" seconds="57" value="25.715834">25°42'57&quot;N</geoCoordinate>
,
<geoCoordinate degrees="118" direction="east" minutes="07" orientation="longitude" precision="15" seconds="14" value="118.12056">118°07'14&quot;E</geoCoordinate>
, alt.
<quantity metricMagnitude="3" metricUnit="m" metricValue="1.54" unit="m" value="1540.0">
<elevation metricMagnitude="3" metricUnit="m" metricValue="1.54" unit="m" value="1540.0">1540 m</elevation>
</quantity>
, on bark,
<collectingDate value="2019-07-25">25 Jul 2019</collectingDate>
,
<collectorName>F.Y. Liu</collectorName>
FJ19127-2, same locality, FJ19128-2, FJ19141-2 (LCUF)
</materialsCitation>
.
</paragraph>
</subSubSection>
<subSubSection pageId="0" pageNumber="73" type="notes">
<paragraph pageId="0" pageNumber="73">Note.</paragraph>
<paragraph pageId="0" pageNumber="73">
<taxonomicName authorityName="Weerakoon, Lumbsch &amp; Luecking, in Weerakoon, Rivas Plata, Lumbsch &amp; Luecking, Lichenologist 44 (3): 377" authorityYear="2012" class="Basidiomycetes" family="Graphidaceae" genus="Chapsa" kingdom="Fungi" lsidName="Chapsa wolseleyana" order="Ostropales" pageId="0" pageNumber="73" phylum="Ascomycota" rank="species" species="wolseleyana">
<emphasis italics="true" pageId="0" pageNumber="73">Chapsa wolseleyana</emphasis>
</taxonomicName>
is characterised by its grey-brown, uneven thallus, apothecia with raised to lobed thalline margin, rose-red discs with similar coloured pruina, rose-red epihymenium and paraphyses tips, distinct periphysoids, 1-spored asci, muriform ascospores, red when young and hyaline to olive-brown when old. Only a few species of
<taxonomicName authorityName="A.Massalongo" authorityYear="1860" class="Basidiomycetes" family="Graphidaceae" genus="Chapsa" kingdom="Fungi" lsidName="Chapsa" order="Ostropales" pageId="0" pageNumber="73" phylum="Ascomycota" rank="genus">
<emphasis italics="true" pageId="0" pageNumber="73">Chapsa</emphasis>
</taxonomicName>
have pigmented discs and among them
<taxonomicName lsidName="C. rubropulveracea" pageId="0" pageNumber="73" rank="species" species="rubropulveracea">
<emphasis italics="true" pageId="0" pageNumber="73">C. rubropulveracea</emphasis>
</taxonomicName>
Hale ex Mangold,
<normalizedToken originalValue="Lücking">Luecking</normalizedToken>
&amp; Lumbsch is morphologically most similar to
<taxonomicName lsidName="C. wolseleyana" pageId="0" pageNumber="73" rank="species" species="wolseleyana">
<emphasis italics="true" pageId="0" pageNumber="73">C. wolseleyana</emphasis>
</taxonomicName>
, but its thallus is farinose and its ascospores are 8 per ascus, smaller (15-20
<normalizedToken originalValue="×">x</normalizedToken>
5-6
<normalizedToken originalValue="μm">μm</normalizedToken>
) and transversely septate (
<bibRefCitation DOI="https://doi.org/10.11646/phytotaxa.18.1.1" author="Lumbsch, HT" journalOrPublisher="Phytotaxa" pageId="0" pageNumber="73" pagination="36 - 40" refId="B15" refString="Lumbsch, HT, Ahti, T, Altermann, S, De Paz, GA, Aptroot, A, Arup, U et al., 2011. One hundred new species of lichenized fungi: a signature of undiscovered global diversity. Phytotaxa 18: 36 - 40, DOI: https://doi.org/10.11646/phytotaxa.18.1.1" title="One hundred new species of lichenized fungi: a signature of undiscovered global diversity." url="https://doi.org/10.11646/phytotaxa.18.1.1" volume="18" year="2011">Lumbsch et al. 2011</bibRefCitation>
).
</paragraph>
<paragraph pageId="0" pageNumber="73">
<taxonomicName authorityName="Weerakoon, Lumbsch &amp; Luecking, in Weerakoon, Rivas Plata, Lumbsch &amp; Luecking, Lichenologist 44 (3): 377" authorityYear="2012" class="Basidiomycetes" family="Graphidaceae" genus="Chapsa" kingdom="Fungi" lsidName="Chapsa wolseleyana" order="Ostropales" pageId="0" pageNumber="73" phylum="Ascomycota" rank="species" species="wolseleyana">
<emphasis italics="true" pageId="0" pageNumber="73">Chapsa wolseleyana</emphasis>
</taxonomicName>
was transferred to
<taxonomicName authorityName="S.Parnmen, R.Lucking &amp; H.T.Lumbsch" authorityYear="2012" class="Lecanoromycetes" family="Graphidaceae" genus="Astrochapsa" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Astrochapsa" order="Ostropales" pageId="0" pageNumber="73" phylum="Ascomycota" rank="genus">
<emphasis italics="true" pageId="0" pageNumber="73">Astrochapsa</emphasis>
</taxonomicName>
, based on a phenotype-based analysis (not molecular phylogeny) (
<bibRefCitation DOI="https://doi.org/10.1371/journal.pone.0051392" author="Parnmen, S" journalOrPublisher="The Lichenologist" pageId="0" pageNumber="73" refId="B20" refString="Parnmen, S, Luecking, R, Lumbsch, HT, 2012. Phylogenetic classification at generic level in the absence of distinct phylogenetic patterns of phenotypical variation: a case study in Graphidaceae (Ascomycota). PLoS ONE 7(12): e51392. https://doi.org/10.1371/journal.pone.0051392" title="Phylogenetic classification at generic level in the absence of distinct phylogenetic patterns of phenotypical variation: a case study in Graphidaceae (Ascomycota). PLoS ONE 7 (12): e 51392." url="https://doi.org/10.1371/journal.pone.0051392" year="2012">Parnmen et al. 2012</bibRefCitation>
). However, our phylogenetic analysis shows that this species belongs in
<taxonomicName authorityName="A.Massalongo" authorityYear="1860" class="Basidiomycetes" family="Graphidaceae" genus="Chapsa" kingdom="Fungi" lsidName="Chapsa" order="Ostropales" pageId="0" pageNumber="73" phylum="Ascomycota" rank="genus">
<emphasis italics="true" pageId="0" pageNumber="73">Chapsa</emphasis>
</taxonomicName>
, rather than
<emphasis italics="true" pageId="0" pageNumber="73">
<taxonomicName authorityName="S.Parnmen, R.Lucking &amp; H.T.Lumbsch" authorityYear="2012" class="Lecanoromycetes" family="Graphidaceae" genus="Astrochapsa" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Astrochapsa" order="Ostropales" pageId="0" pageNumber="73" phylum="Ascomycota" rank="genus">Astrochapsa</taxonomicName>
.
<taxonomicName authorityName="Weerakoon, Lumbsch &amp; Luecking, in Weerakoon, Rivas Plata, Lumbsch &amp; Luecking, Lichenologist 44 (3): 377" authorityYear="2012" class="Basidiomycetes" family="Graphidaceae" genus="Chapsa" kingdom="Fungi" lsidName="Chapsa wolseleyana" order="Ostropales" pageId="0" pageNumber="73" phylum="Ascomycota" rank="species" species="wolseleyana">Chapsa wolseleyana</taxonomicName>
</emphasis>
was associated phylogenetically with a strongly-supported clade (100/1) with
<taxonomicName lsidName="C. patens" pageId="0" pageNumber="73" rank="species" species="patens">
<emphasis italics="true" pageId="0" pageNumber="73">C. patens</emphasis>
</taxonomicName>
, but with sufficient distance to be considered a distinct species. In addition, the latter differs from
<taxonomicName lsidName="C. wolseleyana" pageId="0" pageNumber="73" rank="species" species="wolseleyana">
<emphasis italics="true" pageId="0" pageNumber="73">C. wolseleyana</emphasis>
</taxonomicName>
in having larger pale brown apothecia (up to 2 mm diam.) with white pruina, unpigmented epihymenium and unpigmented paraphyses adspersed with fine greyish to brownish granules, hyaline ascospores (Frisch et al. 2006;
<bibRefCitation DOI="https://doi.org/10.5248/120.23" author="Joshi, S" journalOrPublisher="Mycokeys" pageId="0" pageNumber="73" refId="B7" refString="Joshi, S, Upreti, DK, Nayaka, S, 2012. The lichen genus Chapsa (Graphidaceae) in India. Mycotaxon 120: 23-24, 27, 31, 32. https://doi.org/10.5248/120.23" title="The lichen genus Chapsa (Graphidaceae) in India. Mycotaxon 120: 23 - 24, 27, 31, 32." url="https://doi.org/10.5248/120.23" year="2012">Joshi et al. 2012</bibRefCitation>
;
<bibRefCitation DOI="https://doi.org/10.1017/S0024282918000439" author="Joshi, S" journalOrPublisher="The Lichenologist" pageId="0" pageNumber="73" pagination="634 - 639" refId="B8" refString="Joshi, S, Upreti, DK, Divakar, PK, Lumbsch, HT, Luecking, R, 2018. A re-evaluation of thelotremoid Graphidaceae (lichenized Ascomycota: Ostropales) in India. The Lichenologist 50 (6): 634 - 639, DOI: https://doi.org/10.1017/S0024282918000439" title="A re-evaluation of thelotremoid Graphidaceae (lichenized Ascomycota: Ostropales) in India." url="https://doi.org/10.1017/S0024282918000439" volume="50" year="2018">Joshi et al. 2018</bibRefCitation>
).
</paragraph>
</subSubSection>
</treatment>
</document>

97
data/A4/D5/7B/A4D57B5DD80BD296D82DC9D76016E357.xml Normal file
View file

@ -0,0 +1,97 @@
<document ENCODING="UTF-8" ID-DOI="http://doi.org/10.5281/zenodo.4368278" ID-GBIF-Dataset="94ff507e-8f96-48b3-b3a5-77595fc9be40" ID-GBIF-Taxon="164006079" ID-ISBN="978-0-9506207-7-0" ID-Zenodo-Dep="4368278" checkinTime="1588973467896" checkinUser="admin" docAuthor="Jarvis, Charlie" docDate="2007" docId="A4D57B5DD80BD296D82DC9D76016E357" docLanguage="en" docName="ch7.gg.G.xml" docOrigin="Order out of Chaos. Linnaean Plant Types and their Types, London: Linnaean Society of London in association with the Natural History Museum" docTitle="Galium rubrum Linnaeus 1753" docType="treatment" docVersion="12" lastPageNumber="529" masterDocId="9A97CACD39D4E2C51CC55E3DDF0D68D0" masterDocTitle="Chapter 7: Linnaean Plant Names and their Types (part G)" masterLastPageNumber="556" masterPageNumber="529" pageNumber="529" updateTime="1642016706734" updateUser="ExternalLinkService">
<mods:mods xmlns:mods="http://www.loc.gov/mods/v3">
<mods:titleInfo>
<mods:title>Chapter 7: Linnaean Plant Names and their Types (part G)</mods:title>
</mods:titleInfo>
<mods:name type="personal">
<mods:role>
<mods:roleTerm>Author</mods:roleTerm>
</mods:role>
<mods:namePart>Jarvis, Charlie</mods:namePart>
<mods:affiliation>Department of Botany, Natural History Museum, Cromwell Road, London, UK</mods:affiliation>
</mods:name>
<mods:typeOfResource>text</mods:typeOfResource>
<mods:relatedItem type="host">
<mods:originInfo>
<mods:dateIssued>2007</mods:dateIssued>
<mods:publisher>Linnaean Society of London in association with the Natural History Museum</mods:publisher>
<mods:place>
<mods:placeTerm>London</mods:placeTerm>
</mods:place>
</mods:originInfo>
<mods:titleInfo>
<mods:title>Order out of Chaos. Linnaean Plant Types and their Types</mods:title>
</mods:titleInfo>
<mods:part>
<mods:extent unit="page">
<mods:start>529</mods:start>
<mods:end>556</mods:end>
</mods:extent>
</mods:part>
</mods:relatedItem>
<mods:classification>book chapter</mods:classification>
<mods:identifier type="DOI">https://doi.org/10.5281/zenodo.291971</mods:identifier>
<mods:identifier type="ISBN">978-0-9506207-7-0</mods:identifier>
<mods:identifier type="Zenodo-Dep">291971</mods:identifier>
</mods:mods>
<treatment ID-DOI="http://doi.org/10.5281/zenodo.4368278" ID-GBIF-Taxon="164006079" ID-Zenodo-Dep="4368278" LSID="urn:lsid:plazi:treatment:A4D57B5DD80BD296D82DC9D76016E357" httpUri="http://treatment.plazi.org/id/A4D57B5DD80BD296D82DC9D76016E357" lastPageNumber="529" pageNumber="529">
<subSubSection pageNumber="529" type="reference_group">
<paragraph pageNumber="529">
<bibCitation author="Linnaeus" pageNumber="529" pagination="107" title="Galium rubrum" volumeTitle="Species Plantarum 1" year="1753">
<treatmentCitation ID-DOI="http://doi.org/10.5281/zenodo.4354237" ID-Zenodo-Dep="4354237" author="Linnaeus" httpUri="http://treatment.plazi.org/id/64969570A0F78AFCA88424F300174746" pageNumber="529" year="1753">
<taxonomicName authority="Linnaeus" authorityName="Linnaeus" authorityYear="1753" class="Magnoliopsida" family="Rubiaceae" genus="Galium" kingdom="Plantae" order="Gentianales" pageNumber="529" phylum="Tracheophyta" rank="species" species="rubrum">
<emphasis bold="true" pageNumber="529">Galium rubrum</emphasis>
Linnaeus
</taxonomicName>
,
<volumeTitle pageNumber="529">
<emphasis italics="true" pageNumber="529">Species Plantarum</emphasis>
1
</volumeTitle>
: 107. 1753
</treatmentCitation>
</bibCitation>
.
</paragraph>
</subSubSection>
<subSubSection pageNumber="529" type="distribution">
<paragraph pageNumber="529">&quot;Habitat in Italia.&quot; RCN: 876.</paragraph>
</subSubSection>
<subSubSection pageNumber="529" type="materials_examined">
<paragraph pageNumber="529">Type not designated.</paragraph>
</subSubSection>
<subSubSection pageNumber="529" type="materials_examined">
<paragraph pageNumber="529">
Original material:
<materialsCitation ID-GBIF-Occurrence="2611570513" collectionCode="UPS" pageNumber="529" specimenCode="30">
Herb. Burser XIX: 30 (
<collectionCode pageNumber="529">UPS</collectionCode>
)
</materialsCitation>
;
<materialsCitation ID-GBIF-Occurrence="2611570419" collectionCode="BM" pageNumber="529" specimenCode="34">
Herb. Clifford: 34,
<taxonomicName class="Magnoliopsida" family="Rubiaceae" genus="Galium" kingdom="Plantae" order="Gentianales" pageNumber="529" phylum="Tracheophyta" rank="genus">
<emphasis italics="true" pageNumber="529">Galium</emphasis>
</taxonomicName>
2 (
<collectionCode pageNumber="529">BM</collectionCode>
)
</materialsCitation>
; [icon] in Clusius, Rar. Pl. Hist. 2: 175. 1601.
</paragraph>
</subSubSection>
<subSubSection pageNumber="529" type="nomenclature">
<paragraph pageNumber="529">
Current name:
<taxonomicName authority="L." authorityName="Linnaeus" authorityYear="1753" class="Magnoliopsida" family="Rubiaceae" genus="Galium" kingdom="Plantae" order="Gentianales" pageNumber="529" phylum="Tracheophyta" rank="species" species="rubrum">
<emphasis bold="true" italics="true" pageNumber="529">Galium rubrum</emphasis>
L.
</taxonomicName>
(
<taxonomicName class="Magnoliopsida" family="Rubiaceae" kingdom="Plantae" order="Gentianales" pageNumber="529" phylum="Tracheophyta" rank="family">Rubiaceae</taxonomicName>
).
</paragraph>
</subSubSection>
</treatment>
</document>

73
data/A4/D5/9F/A4D59F4ABFF0E08EDD67E7BF05783A93.xml Normal file
View file

@ -0,0 +1,73 @@
<document id="A37E00E1A61C9A7EA1350E01BFC70604" ENCODING="UTF-8" ID-GBIF-Dataset="00f430e9-5600-4014-b13d-507d02ad3784" ModsDocID="z01472p029" checkinTime="1247400158712" checkinUser="thomas" docAuthor="Nurettin Meriç, Lütfiye Eryilmaz &amp; Müfit Özulug" docDate="2007" docId="A4D59F4ABFF0E08EDD67E7BF05783A93" docLanguage="en" docName="2007_Meric_Eryilmaz_Özulug_gg1.xml" docOrigin="Zootaxa 1472" docSource="http://www.zoobank.org/urn:lsid:zoobank.org:pub:428F3980-C1B8-45FF-812E-0F4847AF6786" docTitle="Scorpaena scrofa Linnaeus 1758" docType="treatment" docVersion="13" lastPageNumber="29" masterDocId="9367FE3CD0D4EAE58957930B017A95CE" masterDocTitle="A catalogue of the fishes held in the Istanbul University, Science Faculty, Hydrobiology Museum." masterLastPageNumber="54" masterPageNumber="29" pageNumber="29" updateTime="1695956985482" updateUser="admin">
<mods:mods id="1E104B90EAE99223417D6B539D47E4E4" xmlns:mods="http://www.loc.gov/mods/v3">
<mods:titleInfo id="7EBE064EE793D0EECA61E5B25B8C11BB">
<mods:title id="DD2E32296BCFFCA95A2C4945AC3A1B85">A catalogue of the fishes held in the Istanbul University, Science Faculty, Hydrobiology Museum.</mods:title>
</mods:titleInfo>
<mods:name id="0541753D48739F423057989ADA3FE4BA" type="personal">
<mods:role id="C8D80B53D745411A0C4CFA1C6DAB0AE1">
<mods:roleTerm id="93B7F90675405ED7B007A0AB377EB0C1">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="B891C6F220407DBF0DDA9271D362D4D5">Nurettin Meriç</mods:namePart>
</mods:name>
<mods:name id="F0C17FA9D55038E08ECBBA519DC428F4" type="personal">
<mods:role id="922A885E00FF609D4D622182D4BB534C">
<mods:roleTerm id="1146318C4F7C2D5C16D5883B1AA99C2A">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="7F678A0A6E5F156882E1D584D9A24F26">Lütfiye Eryilmaz</mods:namePart>
</mods:name>
<mods:name id="D7A61449DE570D4A78CCFF8016DC81B1" type="personal">
<mods:role id="170A7ABDC731D92C06511ED41DD68419">
<mods:roleTerm id="4EDB4597DCE49D07838459080AE8FD86">Author</mods:roleTerm>
</mods:role>
<mods:namePart id="1A3EE167C89808A99CD82EE9A56B9680">Müfit Özulug</mods:namePart>
</mods:name>
<mods:typeOfResource id="2273FB4234D953E502E3855D29B820FE">text</mods:typeOfResource>
<mods:relatedItem id="A76854819066BE642D95702F9B96601E" type="host">
<mods:titleInfo id="5473B53BD7596DF7D6E05FBFF9E7ECE9">
<mods:title id="035E9207368155688F1DD3A334B338DD">Zootaxa</mods:title>
</mods:titleInfo>
<mods:part id="72244EB62942450F13AD1D9516C85A1F">
<mods:date id="59FFC502C64B65C4DE9111526C9E2076">2007</mods:date>
<mods:detail id="C8B5DB664BF225EEBC05B731923DED8F" type="volume">
<mods:number id="172F85A9A10C0FB4115C38A43A42EE17">1472</mods:number>
</mods:detail>
<mods:extent id="5AD47DC06B9316ACE69A46E5B04C9CB4" unit="page">
<mods:start id="B93A61149263AA7FB2972D7C1171EAF2">29</mods:start>
<mods:end id="9818A35C7BF043545FA89B6EF579078B">54</mods:end>
</mods:extent>
</mods:part>
</mods:relatedItem>
<mods:location id="3D96F5851FB92C11FD0DEF2ECC057CCD">
<mods:url id="175E54680CCB05AF17AF7AB3C0E74CED">http://www.zoobank.org/urn:lsid:zoobank.org:pub:428F3980-C1B8-45FF-812E-0F4847AF6786</mods:url>
</mods:location>
<mods:classification id="8911F042DBB7DE3DC2E6C645533EC57C">journal article</mods:classification>
<mods:identifier id="D502832C1EB1BD48F05051DAEB36FE6F" type="ZooBank-PUB">z01472p029</mods:identifier>
</mods:mods>
<treatment id="A4D59F4ABFF0E08EDD67E7BF05783A93" ID-DOI="http://doi.org/10.5281/zenodo.6245179" ID-GBIF-Taxon="100118444" ID-Zenodo-Dep="6245179" LSID="urn:lsid:plazi:treatment:A4D59F4ABFF0E08EDD67E7BF05783A93" httpUri="http://treatment.plazi.org/id/A4D59F4ABFF0E08EDD67E7BF05783A93" lastPageNumber="29" pageNumber="29">
<subSubSection id="262EA0915CB2FD6D26B0958EE90DC248" pageNumber="29" type="nomenclature">
<paragraph id="ABCE56EFA07A97A7F7598FA0DCAC0B3D" pageNumber="29">
<taxonomicName id="8E47573AD08C529D430C45B5AB101E2D" ID-CoL="79YXW" ID-ENA="210004" authority="Linnaeus, 1758" authorityName="Linnaeus" authorityYear="1758" class="Actinopterygii" family="Scorpaenidae" genus="Scorpaena" kingdom="Animalia" order="Scorpaeniformes" pageNumber="29" phylum="Chordata" rank="species" species="scrofa">Scorpaena scrofa Linnaeus, 1758</taxonomicName>
</paragraph>
</subSubSection>
<subSubSection id="11DD11DEE2454289B23FE9FA3B7C98CD" pageNumber="29" type="materials_examined">
<paragraph id="0DD099B0D9D6FE27275F5904DF3D2072" pageNumber="29">
<materialsCitation id="A60536A7C43C38CAE4D855AD1F3559EE" ID-GBIF-Occurrence="923888105" collectingDate="2003-03" collectingMethod="trawl" collectionCode="IUSHM" collectorName="C. Dalyan" country="Turkey" location="Iskenderun Bay" pageNumber="29" specimenCode="11000 - 737" stateProvince="Mediterranean Sea">
<collectingRegion id="4916C60D1593A19EB4F31A1DA874ED92" pageNumber="29">Mediterranean Sea</collectingRegion>
:
<specimenCode id="3D7704D58345BEB1084F52052F23FA8F" pageNumber="29">11000-737</specimenCode>
(1 spc.),
<date id="1B2ECF18A95DB2586BB4A66170A356B4" month="03" pageNumber="29" value="2003-03" year="2003">
<collectingDate id="B1F8343B43AF598FDB2E4A599B69BFD0" month="03" pageNumber="29" value="2003-03" year="2003">March 2003</collectingDate>
</date>
,
<location id="7D012B1961DC8E6355A043CE86794F2B" LSID="urn:lsid:plazi:treatment:A4D59F4ABFF0E08EDD67E7BF05783A93:7D012B1961DC8E6355A043CE86794F2B" country="Turkey" name="Iskenderun Bay" pageNumber="29" stateProvince="Mediterranean Sea">Iskenderun Bay</location>
,
<collectingMethod id="B793D231D78023B7BBCF2E7EF78DFCD6" pageNumber="29">trawl</collectingMethod>
,
<collectorName id="37B568F45D9A975DBFD846B10CFCCFC7" pageNumber="29">C. Dalyan</collectorName>
</materialsCitation>
.
</paragraph>
</subSubSection>
</treatment>
</document>