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<treatment ID-GBIF-Taxon="142664218" LSID="urn:lsid:plazi:treatment:36598EEB5CF0DF46B113A8449C2C17D6" httpUri="http://treatment.plazi.org/id/36598EEB5CF0DF46B113A8449C2C17D6" lastPageId="10" lastPageNumber="35" pageId="9" pageNumber="34">
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<taxonomicName authority="Henn., Hedwigia 48: 13 (1908)" class="Dothideomycetes" family="Phyllostictaceae" genus="Phyllosticta" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Phyllosticta capitalensis" order="Botryosphaeriales" pageId="9" pageNumber="34" phylum="Ascomycota" rank="species" species="capitalensis">Phyllosticta capitalensis Henn., Hedwigia 48: 13 (1908)</taxonomicName>
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<taxonomicName id="61EC75ED81C27E37CAC7ABB1BC4DAEAD" ID-CoL="4HB8N" authority="Henn., Hedwigia 48: 13 (1908)" class="Dothideomycetes" family="Phyllostictaceae" genus="Phyllosticta" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Phyllosticta capitalensis" order="Botryosphaeriales" pageId="9" pageNumber="34" phylum="Ascomycota" rank="species" species="capitalensis">Phyllosticta capitalensis Henn., Hedwigia 48: 13 (1908)</taxonomicName>
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<paragraph pageId="9" pageNumber="34">Culture characteristics.</paragraph>
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on PDA (Figure 2, PE35), superficial, dark olivaceous with filamentous hyphae and raised edge; reverse dark olivaceous. Sporulating in culture after 2 months.
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<paragraph pageId="9" pageNumber="34">Notes.</paragraph>
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<taxonomicName class="Dothideomycetes" family="Phyllostictaceae" genus="Phyllosticta" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Phyllosticta capitalensis" order="Botryosphaeriales" pageId="9" pageNumber="34" phylum="Ascomycota" rank="species" species="capitalensis">Phyllosticta capitalensis</taxonomicName>
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<paragraph id="31AA2D67718B957F652A3CFF1EB0CD70" pageId="9" pageNumber="34">Notes.</paragraph>
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<taxonomicName id="98D677B7762788AC51A2CC344F0A69EC" class="Dothideomycetes" family="Phyllostictaceae" genus="Phyllosticta" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Phyllosticta capitalensis" order="Botryosphaeriales" pageId="9" pageNumber="34" phylum="Ascomycota" rank="species" species="capitalensis">Phyllosticta capitalensis</taxonomicName>
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(
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<bibRefCitation pageId="9" pageNumber="34">Hennings 1908</bibRefCitation>
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<bibRefCitation id="492147F3573EBE90367F21C551B114E0" pageId="9" pageNumber="34">Hennings 1908</bibRefCitation>
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) is known as an endophytic taxon and a minor plant pathogen. It has a worldwide distribution and has been recorded
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<pageBreakToken pageId="10" pageNumber="35" start="start">on</pageBreakToken>
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70 plant families (
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<bibRefCitation author="Baayen, RP" journalOrPublisher="Phytopathology" pageId="27" pageNumber="52" pagination="464 - 477" title="Nonpathogenic isolates of the citrus black spot fungus, Guignardiacitricarpa, identified as a cosmopolitan endophyte of woody plants, G. mangiferae (Phyllostictacapitalensis)." url="https://doi.org/10.1094/PHYTO.2002.92.5.464" volume="92" year="2002">Baayen et al. 2002</bibRefCitation>
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<bibRefCitation id="0D45C2C6827A9A93736B11419DA40A7E" author="Baayen, RP" journalOrPublisher="Phytopathology" pageId="27" pageNumber="52" pagination="464 - 477" title="Nonpathogenic isolates of the citrus black spot fungus, Guignardiacitricarpa, identified as a cosmopolitan endophyte of woody plants, G. mangiferae (Phyllostictacapitalensis)." url="https://doi.org/10.1094/PHYTO.2002.92.5.464" volume="92" year="2002">Baayen et al. 2002</bibRefCitation>
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;
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<bibRefCitation author="Okane, I" journalOrPublisher="Mycoscience" pageId="33" pageNumber="58" pagination="353 - 363" title="Extensive host range of an endophytic fungus, Guignardiaendophyllicola (anamorph: Phyllostictacapitalensis)." url="https://doi.org/10.1007/S10267-003-0128-X" volume="44" year="2003">Okane et al. 2003</bibRefCitation>
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<bibRefCitation id="AFBC565F67BE17246AC832B37F29B37D" author="Okane, I" journalOrPublisher="Mycoscience" pageId="33" pageNumber="58" pagination="353 - 363" title="Extensive host range of an endophytic fungus, Guignardiaendophyllicola (anamorph: Phyllostictacapitalensis)." url="https://doi.org/10.1007/S10267-003-0128-X" volume="44" year="2003">Okane et al. 2003</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Motohashi, K" journalOrPublisher="Mycoscience" pageId="33" pageNumber="58" pagination="291 - 302" title="Phylogenetic analyses of Japanese species of Phyllosticta sensu stricto." url="https://doi.org/10.1007/S10267-009-0487-Z" volume="50" year="2009">Motohashi et al. 2009</bibRefCitation>
|
||||
<bibRefCitation id="E2F744F7E6BD351DFBFC3680DADDD7FD" author="Motohashi, K" journalOrPublisher="Mycoscience" pageId="33" pageNumber="58" pagination="291 - 302" title="Phylogenetic analyses of Japanese species of Phyllosticta sensu stricto." url="https://doi.org/10.1007/S10267-009-0487-Z" volume="50" year="2009">Motohashi et al. 2009</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Wikee, S" journalOrPublisher="Studies in Mycology" pageId="37" pageNumber="62" pagination="1 - 29" title="A phylogenetic re-evaluation of Phyllosticta (Botryosphaeriales)." url="https://doi.org/10.3114/sim0019" volume="76" year="2013">Wikee et al. 2013</bibRefCitation>
|
||||
<bibRefCitation id="E6DA8FCA48BACA665A109A179CE80CBC" author="Wikee, S" journalOrPublisher="Studies in Mycology" pageId="37" pageNumber="62" pagination="1 - 29" title="A phylogenetic re-evaluation of Phyllosticta (Botryosphaeriales)." url="https://doi.org/10.3114/sim0019" volume="76" year="2013">Wikee et al. 2013</bibRefCitation>
|
||||
). The isolate recovered herein clusters with reasonable ML bootstrap support with other
|
||||
<taxonomicName lsidName="P. capitalensis" pageId="10" pageNumber="35" rank="species" species="capitalensis">P. capitalensis</taxonomicName>
|
||||
<taxonomicName id="068A6A7967957C031366B1BF0602914C" lsidName="P. capitalensis" pageId="10" pageNumber="35" rank="species" species="capitalensis">P. capitalensis</taxonomicName>
|
||||
isolates (Figure 5). Morphological examination also depicts similar morphs and hence it is identified as
|
||||
<taxonomicName lsidName="P. capitalensis" pageId="10" pageNumber="35" rank="species" species="capitalensis">P. capitalensis</taxonomicName>
|
||||
<taxonomicName id="84BA77A523D07ADE567845F470A1D2C1" lsidName="P. capitalensis" pageId="10" pageNumber="35" rank="species" species="capitalensis">P. capitalensis</taxonomicName>
|
||||
.
|
||||
</paragraph>
|
||||
<caption pageId="10" pageNumber="35">
|
||||
<paragraph pageId="10" pageNumber="35">
|
||||
<caption id="EE9C3AF011D1EFF90046FDBEC96D3BE7" pageId="10" pageNumber="35">
|
||||
<paragraph id="1A769143B0E776EF931887CAA0A30BAE" pageId="10" pageNumber="35">
|
||||
Figure 5. Phylogram generated from maximum likelihood analysis based on ITS, LSU and TEF1 sequenced data. Maximum likelihood bootstrap values are given above/below the nodes. The newly generated sequences are in red bold. The tree is rooted with
|
||||
<taxonomicName class="Leotiomycetes" family="Phacidiaceae" genus="Tiarosporella" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Tiarosporella paludosa" order="Helotiales" pageId="10" pageNumber="35" phylum="Ascomycota" rank="species" species="paludosa">Tiarosporella paludosa</taxonomicName>
|
||||
<taxonomicName id="A7909D12A4FD7E868E09B264E1A4DDF8" class="Leotiomycetes" family="Phacidiaceae" genus="Tiarosporella" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Tiarosporella paludosa" order="Helotiales" pageId="10" pageNumber="35" phylum="Ascomycota" rank="species" species="paludosa">Tiarosporella paludosa</taxonomicName>
|
||||
.
|
||||
</paragraph>
|
||||
</caption>
|
||||
<caption pageId="10" pageNumber="35">
|
||||
<paragraph pageId="10" pageNumber="35">
|
||||
<caption id="B909DA0DE8D7FC5D8C8BAE70DC1F3634" pageId="10" pageNumber="35">
|
||||
<paragraph id="994CC2BC15F6E9FDC133F658BA50CD01" pageId="10" pageNumber="35">
|
||||
Figure 6.
|
||||
<taxonomicName class="Dothideomycetes" family="Botryosphaeriaceae" genus="Endomelanconiopsis" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endomelanconiopsis freycinetiae" order="Botryosphaeriales" pageId="10" pageNumber="35" phylum="Ascomycota" rank="species" species="freycinetiae">Endomelanconiopsis freycinetiae</taxonomicName>
|
||||
<taxonomicName id="76F5B722176DA8F9FF5F12A9B320D9D2" class="Dothideomycetes" family="Botryosphaeriaceae" genus="Endomelanconiopsis" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Endomelanconiopsis freycinetiae" order="Botryosphaeriales" pageId="10" pageNumber="35" phylum="Ascomycota" rank="species" species="freycinetiae">Endomelanconiopsis freycinetiae</taxonomicName>
|
||||
(MFLU 18-0002, holotype).
|
||||
<normalizedToken originalValue="a–d">a-d</normalizedToken>
|
||||
<normalizedToken id="DFFB5DF283FDDDAE572CB8120CA3D106" originalValue="a–d">a-d</normalizedToken>
|
||||
Mycelia masses. Scale bars: 20
|
||||
<normalizedToken originalValue="μm">μm</normalizedToken>
|
||||
<normalizedToken id="19F44E9EA3BF4C78ECBEAB34741722AA" originalValue="μm">μm</normalizedToken>
|
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(
|
||||
<normalizedToken originalValue="a–c">a-c</normalizedToken>
|
||||
<normalizedToken id="B0FB6A23FFABB3F89CC50046C791C0AD" originalValue="a–c">a-c</normalizedToken>
|
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), 10
|
||||
<normalizedToken originalValue="μm">μm</normalizedToken>
|
||||
<normalizedToken id="7948B40CC621C082835E52BF54958F17" originalValue="μm">μm</normalizedToken>
|
||||
(d).
|
||||
</paragraph>
|
||||
</caption>
|
||||
|
|
|
|||
|
|
@ -1,180 +1,180 @@
|
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|
||||
<subSubSection id="A87FDA395C12AEDBF6C04648EB7CE3A6" pageId="16" pageNumber="41" type="nomenclature">
|
||||
<paragraph id="9811E7D276A0DE0E908464E3ED0E1D1D" pageId="16" pageNumber="41">
|
||||
<taxonomicName id="E7E842D941BF561979FD5DD2603C8171" ID-CoL="35D3Q" LSID=" MB823840" authority="Tibpromma & K. D. Hyde" class="Sordariomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe pandanicola" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="species" species="pandanicola">Diaporthe pandanicola Tibpromma & K.D. Hyde</taxonomicName>
|
||||
<taxonomicNameLabel id="42C6F94BDEB51EDBA9F36566C1224C32" pageId="16" pageNumber="41">sp. nov.</taxonomicNameLabel>
|
||||
Figure 13
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="16" pageNumber="41" type="etymology">
|
||||
<paragraph pageId="16" pageNumber="41">Etymology.</paragraph>
|
||||
<paragraph pageId="16" pageNumber="41">
|
||||
<subSubSection id="2B07A680846F206A2258042AE7DEB65C" pageId="16" pageNumber="41" type="etymology">
|
||||
<paragraph id="72E9380E732CE8CC1805409234427D30" pageId="16" pageNumber="41">Etymology.</paragraph>
|
||||
<paragraph id="881F6F022B5109A23F8FED4E69784896" pageId="16" pageNumber="41">
|
||||
Name referring to the host genus on which the fungus was first discovered (
|
||||
<taxonomicName class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="16" pageNumber="41" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
<taxonomicName id="5ED0AE9E8F3E7854454C1D4FE9947749" class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="16" pageNumber="41" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
).
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="16" pageNumber="41" type="holotype">
|
||||
<paragraph pageId="16" pageNumber="41">Holotype.</paragraph>
|
||||
<paragraph pageId="16" pageNumber="41">MFLU 18-0006</paragraph>
|
||||
<subSubSection id="FE390BA9330C41D63C4AE24AA254D1CB" pageId="16" pageNumber="41" type="holotype">
|
||||
<paragraph id="7D595B883298FDF62FA0F390C1105FBE" pageId="16" pageNumber="41">Holotype.</paragraph>
|
||||
<paragraph id="BAB67E735887BC04879B92AE35BD866B" pageId="16" pageNumber="41">MFLU 18-0006</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="16" pageNumber="41" type="description">
|
||||
<paragraph pageId="16" pageNumber="41">Culture characteristics.</paragraph>
|
||||
<paragraph pageId="16" pageNumber="41">
|
||||
<taxonomicName genus="Colonies" lsidName="Colonies" pageId="16" pageNumber="41" rank="genus">Colonies</taxonomicName>
|
||||
<subSubSection id="C25F9E32AE018640FAC4C8F5BAF8A6AA" pageId="16" pageNumber="41" type="description">
|
||||
<paragraph id="3EA95F5A7805C7082632BDED4EDE53A2" pageId="16" pageNumber="41">Culture characteristics.</paragraph>
|
||||
<paragraph id="8EE69F4DEA308A2B70363C47466390A8" pageId="16" pageNumber="41">
|
||||
<taxonomicName id="493CE56661E1F0AC24919C8B1F779C22" genus="Colonies" lsidName="Colonies" pageId="16" pageNumber="41" rank="genus">Colonies</taxonomicName>
|
||||
on PDA (Figure 2, PE77), superficial, white, circular with entire edge, smooth and raised on surface media, flossy and velvety; reverse yellow-white, 9 cm diam. in 10 days. Generative hyphae simple-septate, branched, sub-hyaline, cells with guttules, thin-walled, 1.5-7
|
||||
<normalizedToken originalValue="µm">µm</normalizedToken>
|
||||
<normalizedToken id="AD8C8355E49F289A68A1EA12EB2F6CAC" originalValue="µm">µm</normalizedToken>
|
||||
wide. Not sporulating in culture (Figure 13).
|
||||
</paragraph>
|
||||
<caption pageId="16" pageNumber="41">
|
||||
<paragraph pageId="16" pageNumber="41">
|
||||
<caption id="075C68CCED10158A5B0159E687D4433B" pageId="16" pageNumber="41">
|
||||
<paragraph id="F905B22598B7781DD80A60F0B700FE16" pageId="16" pageNumber="41">
|
||||
Figure 12. Phylogram generated from maximum likelihood analysis based on ITS, TEF1 and
|
||||
<normalizedToken originalValue="β-tubulin">β-tubulin</normalizedToken>
|
||||
<normalizedToken id="FA4676117EBFBD8C7AF4C039322EDE6C" originalValue="β-tubulin">β-tubulin</normalizedToken>
|
||||
sequenced data. Maximum likelihood (left) and Bayesian inference (right) bootstrap values are given above/below the nodes. The newly generated sequences are in red bold. The tree is rooted with
|
||||
<taxonomicName class="Sordariomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe ambigua" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="species" species="ambigua">Diaporthe ambigua</taxonomicName>
|
||||
<taxonomicName id="71B5B280FABFDF2ED0D30B0433A30645" class="Sordariomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe ambigua" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="species" species="ambigua">Diaporthe ambigua</taxonomicName>
|
||||
.
|
||||
</paragraph>
|
||||
</caption>
|
||||
<caption pageId="16" pageNumber="41">
|
||||
<paragraph pageId="16" pageNumber="41">
|
||||
<caption id="61F7693E895B1DBA723E6D0DDDF20E09" pageId="16" pageNumber="41">
|
||||
<paragraph id="7F40287DBDF507CF593EB0915D6A9B33" pageId="16" pageNumber="41">
|
||||
Figure 13.
|
||||
<taxonomicName class="Sordariomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe pandanicola" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="species" species="pandanicola">Diaporthe pandanicola</taxonomicName>
|
||||
<taxonomicName id="23CE78397762466B0C4199755BF2D9AA" class="Sordariomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe pandanicola" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="species" species="pandanicola">Diaporthe pandanicola</taxonomicName>
|
||||
(MFLU 18-0006, holotype).
|
||||
<normalizedToken originalValue="a–c">a-c</normalizedToken>
|
||||
<normalizedToken id="F62B9B2A7ADF77A00E9FC2F64FA2B60A" originalValue="a–c">a-c</normalizedToken>
|
||||
Mycelia masses. Scale bars: 5
|
||||
<normalizedToken originalValue="µm">µm</normalizedToken>
|
||||
<normalizedToken id="A44D29DFA34B31D6D8695F849CAAA8B5" originalValue="µm">µm</normalizedToken>
|
||||
(
|
||||
<normalizedToken originalValue="a–c">a-c</normalizedToken>
|
||||
<normalizedToken id="9066F759469FB2FCC688E275347C5E46" originalValue="a–c">a-c</normalizedToken>
|
||||
).
|
||||
</paragraph>
|
||||
</caption>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="16" pageNumber="41" type="materials_examined">
|
||||
<paragraph pageId="16" pageNumber="41">Material examined.</paragraph>
|
||||
<paragraph pageId="16" pageNumber="41">
|
||||
<subSubSection id="50095F05F4F7D779FA22AB3E71825719" pageId="16" pageNumber="41" type="materials_examined">
|
||||
<paragraph id="A7B0D1E42A4212FE041582E81B207191" pageId="16" pageNumber="41">Material examined.</paragraph>
|
||||
<paragraph id="AC9ADDBBF8371379DFBEED48C634862F" pageId="16" pageNumber="41">
|
||||
THAILAND, Chumphon, Pathio District, on healthy leaves of
|
||||
<taxonomicName class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="16" pageNumber="41" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
<taxonomicName id="56BA935328034391DBBDBB5261DD0D26" class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="16" pageNumber="41" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
sp. (
|
||||
<taxonomicName family="Pandanaceae" lsidName="Mycelium" pageId="16" pageNumber="41" rank="family">Pandanaceae</taxonomicName>
|
||||
<taxonomicName id="FE46A5FDA90072DA1268AEA9C7833B94" class="Liliopsida" family="Pandanaceae" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Mycelium" order="Pandanales" pageId="16" pageNumber="41" phylum="Tracheophyta" rank="family">Pandanaceae</taxonomicName>
|
||||
), 1 December 2016, S. Tibpromma PE77 (MFLU 18-0006, holotype); HKAS100858, paratype, ex-type living cultures, MFLUCC 17-0607 = KUMCC 17-0297.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="16" pageNumber="41" type="genbank numbers">
|
||||
<paragraph pageId="16" pageNumber="41">GenBank numbers.</paragraph>
|
||||
<paragraph pageId="16" pageNumber="41">
|
||||
<subSubSection id="DA39DECC7079FB494884D1E3ED898FB7" pageId="16" pageNumber="41" type="genbank numbers">
|
||||
<paragraph id="6ECF9C8A60DFBE396F6409A73E9E60F2" pageId="16" pageNumber="41">GenBank numbers.</paragraph>
|
||||
<paragraph id="A2DFBC5B3A5EB78886D4062DA1E66D59" pageId="16" pageNumber="41">
|
||||
ITS=MG646974,
|
||||
<normalizedToken originalValue="β-tubulin">β-tubulin</normalizedToken>
|
||||
<normalizedToken id="8BCA67F34006839C9BFDC67D17ACC236" originalValue="β-tubulin">β-tubulin</normalizedToken>
|
||||
=MG646930, ACT=MG646930.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="16" pageNumber="41" type="notes">
|
||||
<paragraph pageId="16" pageNumber="41">Notes.</paragraph>
|
||||
<paragraph pageId="16" pageNumber="41">
|
||||
<taxonomicName class="Dothideomycetes" family="Botryosphaeriaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe" order="Botryosphaeriales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="genus">Diaporthe</taxonomicName>
|
||||
<subSubSection id="471880E5F863B9BC95AA01A38BABBE87" pageId="16" pageNumber="41" type="notes">
|
||||
<paragraph id="4A68E200966EE4287120AB3B436FB61C" pageId="16" pageNumber="41">Notes.</paragraph>
|
||||
<paragraph id="01A7E6C68F14AD917AEE36B295F96B75" pageId="16" pageNumber="41">
|
||||
<taxonomicName id="FF63DFD3584F1E475DF99E8E5B2D3363" class="Dothideomycetes" family="Botryosphaeriaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe" order="Botryosphaeriales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="genus">Diaporthe</taxonomicName>
|
||||
species are plant pathogens, endophytes or saprobes (
|
||||
<bibRefCitation pageId="16" pageNumber="41">Carroll 1986</bibRefCitation>
|
||||
<bibRefCitation id="F435C7BB1CA7FF3DD36CA7C1EAB93D3D" pageId="16" pageNumber="41">Carroll 1986</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Garcia-Reyne, A" journalOrPublisher="Transplant Infectious Disease" pageId="29" pageNumber="54" pagination="204 - 207" title="Cutaneous infection by Phomopsislongicolla in a renal transplant recipient from Guinea: first report of human infection by this fungus." url="https://doi.org/10.1111/j.1399-3062.2010.00570.x" volume="13" year="2011">Garcia-Reyne et al. 2011</bibRefCitation>
|
||||
<bibRefCitation id="FFF5FA8AAA381EF67BCA9DFEEAD0108F" author="Garcia-Reyne, A" journalOrPublisher="Transplant Infectious Disease" pageId="29" pageNumber="54" pagination="204 - 207" title="Cutaneous infection by Phomopsislongicolla in a renal transplant recipient from Guinea: first report of human infection by this fungus." url="https://doi.org/10.1111/j.1399-3062.2010.00570.x" volume="13" year="2011">Garcia-Reyne et al. 2011</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Udayanga, D" journalOrPublisher="Fungal Diversity" pageId="36" pageNumber="61" pagination="189 - 225" title="The genus Phomopsis: biology, applications, species concepts and names of common pathogens." url="https://doi.org/10.1007/s13225-011-0126-9" volume="50" year="2011">Udayanga et al. 2011</bibRefCitation>
|
||||
<bibRefCitation id="6B990F786338D546E8BED1D0EF951E4F" author="Udayanga, D" journalOrPublisher="Fungal Diversity" pageId="36" pageNumber="61" pagination="189 - 225" title="The genus Phomopsis: biology, applications, species concepts and names of common pathogens." url="https://doi.org/10.1007/s13225-011-0126-9" volume="50" year="2011">Udayanga et al. 2011</bibRefCitation>
|
||||
,
|
||||
<bibRefCitation author="Udayanga, D" journalOrPublisher="Fungal Diversity" pageId="37" pageNumber="62" pagination="157 - 171" title="A multi-locus phylogenetic evaluation of Diaporthe (Phomopsis)." url="https://doi.org/10.1007/s13225-012-0190-9" volume="56" year="2012">2012</bibRefCitation>
|
||||
<bibRefCitation id="A383D5AEBFF4C4671D9BADC5C4743C3F" author="Udayanga, D" journalOrPublisher="Fungal Diversity" pageId="37" pageNumber="62" pagination="157 - 171" title="A multi-locus phylogenetic evaluation of Diaporthe (Phomopsis)." url="https://doi.org/10.1007/s13225-012-0190-9" volume="56" year="2012">2012</bibRefCitation>
|
||||
,
|
||||
<bibRefCitation author="Udayanga, D" journalOrPublisher="Fungal Diversity" pageId="37" pageNumber="62" pagination="203 - 229" title="Insights into the genus Diaporthe: phylogenetic species delimitation in the D. eres species complex." url="https://doi.org/10.1007/s13225-014-0297-2" volume="67" year="2014">2014</bibRefCitation>
|
||||
<bibRefCitation id="8A103FAABDF8F92B0D2731639B87B4BE" author="Udayanga, D" journalOrPublisher="Fungal Diversity" pageId="37" pageNumber="62" pagination="203 - 229" title="Insights into the genus Diaporthe: phylogenetic species delimitation in the D. eres species complex." url="https://doi.org/10.1007/s13225-014-0297-2" volume="67" year="2014">2014</bibRefCitation>
|
||||
,
|
||||
<bibRefCitation author="Hyde, KD" journalOrPublisher="Fungal Diversity" pageId="30" pageNumber="55" pagination="21 - 125" title="One stop shop: backbones trees for important phytopathogenic genera: I." url="https://doi.org/10.1007/s13225-014-0298-1" volume="67" year="2014">Hyde et al. 2014</bibRefCitation>
|
||||
<bibRefCitation id="2BE88AEEF5A5FD40B852E24C8A440024" author="Hyde, KD" journalOrPublisher="Fungal Diversity" pageId="30" pageNumber="55" pagination="21 - 125" title="One stop shop: backbones trees for important phytopathogenic genera: I." url="https://doi.org/10.1007/s13225-014-0298-1" volume="67" year="2014">Hyde et al. 2014</bibRefCitation>
|
||||
). Here, a new species
|
||||
<taxonomicName class="Sordariomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe pandanicola" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="species" species="pandanicola">Diaporthe pandanicola</taxonomicName>
|
||||
<taxonomicName id="6C65EFDE952D40EAB38B981BC1F4D017" class="Sordariomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe pandanicola" order="Diaporthales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="species" species="pandanicola">Diaporthe pandanicola</taxonomicName>
|
||||
is introduced based on phylogeny support. Based on phylogenetic analysis, the new species was well-separated from closely related species of
|
||||
<taxonomicName class="Dothideomycetes" family="Botryosphaeriaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe" order="Botryosphaeriales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="genus">Diaporthe</taxonomicName>
|
||||
<taxonomicName id="363DA774F6D99F6C31D7E9752E82FF64" class="Dothideomycetes" family="Botryosphaeriaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe" order="Botryosphaeriales" pageId="16" pageNumber="41" phylum="Ascomycota" rank="genus">Diaporthe</taxonomicName>
|
||||
(61% in ML, 0.97 in PP). However, this isolate is an endophytic fungus and did not sporulate in culture during 5 months (Figure 13).
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
|
|
|
|||
|
|
@ -1,126 +1,126 @@
|
|||
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<treatment ID-GBIF-Taxon="142664170" LSID="urn:lsid:plazi:treatment:36FD1831F38190B604C2D852B83A074E" httpUri="http://treatment.plazi.org/id/36FD1831F38190B604C2D852B83A074E" lastPageId="15" lastPageNumber="39" pageId="14" pageNumber="39">
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<subSubSection pageId="14" pageNumber="39" type="nomenclature">
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<paragraph pageId="14" pageNumber="39">
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<taxonomicName authority="Nitschke" family="Pleosporaceae" higherTaxonomySource="treatment-meta" kingdom="Fungi" lsidName="Mycelium" order="Pleosporales" pageId="14" pageNumber="39" rank="family">Pleosporaceae Nitschke</taxonomicName>
|
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<treatment id="36FD1831F38190B604C2D852B83A074E" ID-GBIF-Taxon="142664170" LSID="urn:lsid:plazi:treatment:36FD1831F38190B604C2D852B83A074E" httpUri="http://treatment.plazi.org/id/36FD1831F38190B604C2D852B83A074E" lastPageId="15" lastPageNumber="39" pageId="14" pageNumber="39" scope_order="Capnodiales" scope_phylum="Ascomycota">
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<subSubSection id="83CFB81CA08C313ECA8494F322910187" pageId="14" pageNumber="39" type="nomenclature">
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<paragraph id="D363D6BC3F2B85367B572406AD9EF915" pageId="14" pageNumber="39">
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<taxonomicName id="ED672397ABEEE657F9AE32B205090897" ID-CoL="625RR" authority="Nitschke" class="Dothideomycetes" family="Pleosporaceae" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Mycelium" order="Pleosporales" pageId="14" pageNumber="39" phylum="Ascomycota" rank="family">Pleosporaceae Nitschke</taxonomicName>
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</paragraph>
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</subSubSection>
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<paragraph pageId="14" pageNumber="39">Remarks.</paragraph>
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<paragraph lastPageId="15" lastPageNumber="40" pageId="14" pageNumber="39">
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<subSubSection id="2261E05A80F3152B193E13408049C695" lastPageId="15" lastPageNumber="40" pageId="14" pageNumber="39" type="remarks">
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<paragraph id="BFCC079B0603020DC049BDDEFB1F54E6" pageId="14" pageNumber="39">Remarks.</paragraph>
|
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<paragraph id="9A1B27597EB90D7B4459B601A2156921" lastPageId="15" lastPageNumber="40" pageId="14" pageNumber="39">
|
||||
The family
|
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<taxonomicName genus="Pleosporaceae" lsidName="Pleosporaceae" pageId="14" pageNumber="39" rank="genus">Pleosporaceae</taxonomicName>
|
||||
<taxonomicName id="6EB9900768A82204504D64473926E09D" genus="Pleosporaceae" lsidName="Pleosporaceae" pageId="14" pageNumber="39" rank="genus">Pleosporaceae</taxonomicName>
|
||||
was introduced by
|
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<bibRefCitation pageId="14" pageNumber="39">Nitschke (1869)</bibRefCitation>
|
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<bibRefCitation id="688E95B325780AE2FF0284F9FC29E062" pageId="14" pageNumber="39">Nitschke (1869)</bibRefCitation>
|
||||
and is the largest family of the order
|
||||
<taxonomicName genus="Pleosporales" lsidName="Pleosporales" pageId="14" pageNumber="39" rank="genus">Pleosporales</taxonomicName>
|
||||
<taxonomicName id="A8D7BEE3171682675FA800E0CF72F729" genus="Pleosporales" lsidName="Pleosporales" pageId="14" pageNumber="39" rank="genus">Pleosporales</taxonomicName>
|
||||
(
|
||||
<bibRefCitation author="Hyde, KD" journalOrPublisher="Fungal Diversity" pageId="29" pageNumber="54" pagination="1 - 313" title="Families of Dothideomycetes." url="https://doi.org/10.1007/s13225-013-0263-4" volume="63" year="2013">Hyde et al. 2013</bibRefCitation>
|
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<bibRefCitation id="447B0C1EAECCAA25370CE8BDB056146D" author="Hyde, KD" journalOrPublisher="Fungal Diversity" pageId="29" pageNumber="54" pagination="1 - 313" title="Families of Dothideomycetes." url="https://doi.org/10.1007/s13225-013-0263-4" volume="63" year="2013">Hyde et al. 2013</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Ariyawansa, HA" journalOrPublisher="Fungal Diversity" pageId="27" pageNumber="52" pagination="85 - 139" title="Towards a natural classification and backbone tree for Pleosporaceae." url="https://doi.org/10.1007/s13225-015-0323-z" volume="71" year="2015 b">Ariyawansa et al. 2015b</bibRefCitation>
|
||||
<bibRefCitation id="2B09D29202C1BAD5183B793F752CD938" author="Ariyawansa, HA" journalOrPublisher="Fungal Diversity" pageId="27" pageNumber="52" pagination="85 - 139" title="Towards a natural classification and backbone tree for Pleosporaceae." url="https://doi.org/10.1007/s13225-015-0323-z" volume="71" year="2015 b">Ariyawansa et al. 2015b</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Liu, JK" journalOrPublisher="Fungal Diversity" pageId="32" pageNumber="57" pagination="75 - 99" title="Ranking higher taxa using divergence times: a case study in Dothideomycetes." url="https://doi.org/10.1007/s13225-017-0385-1" volume="84" year="2017">Liu et al. 2017</bibRefCitation>
|
||||
<bibRefCitation id="1E63939A93B9C10A2AD785106304B9B7" author="Liu, JK" journalOrPublisher="Fungal Diversity" pageId="32" pageNumber="57" pagination="75 - 99" title="Ranking higher taxa using divergence times: a case study in Dothideomycetes." url="https://doi.org/10.1007/s13225-017-0385-1" volume="84" year="2017">Liu et al. 2017</bibRefCitation>
|
||||
). Members of this family can be endophytes, aquatic or terrestrial saprobes, plant
|
||||
<pageBreakToken pageId="15" pageNumber="40" start="start">pathogens</pageBreakToken>
|
||||
<pageBreakToken id="AA26DD790723418B492AE468D764A6D9" pageId="15" pageNumber="40" start="start">pathogens</pageBreakToken>
|
||||
or opportunistic animal pathogens (
|
||||
<bibRefCitation pageId="15" pageNumber="40">Sivanesan 1984</bibRefCitation>
|
||||
<bibRefCitation id="FE56B839A9047C36312A886D4C8E1E07" pageId="15" pageNumber="40">Sivanesan 1984</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation author="Carter, E" journalOrPublisher="Journal of Clinical Microbiology" pageId="27" pageNumber="52" pagination="5419 - 5423" title="Fatal cerebral phaeohyphomycosis due to Curvularia lunata in an immunocompetent patient." url="https://doi.org/10.1128/JCM.42.11.5419-5423.2004" volume="42" year="2004">Carter and Boudreaux 2004</bibRefCitation>
|
||||
<bibRefCitation id="DB0F1A1E52B55ABFEA1314932EC2527A" author="Carter, E" journalOrPublisher="Journal of Clinical Microbiology" pageId="27" pageNumber="52" pagination="5419 - 5423" title="Fatal cerebral phaeohyphomycosis due to Curvularia lunata in an immunocompetent patient." url="https://doi.org/10.1128/JCM.42.11.5419-5423.2004" volume="42" year="2004">Carter and Boudreaux 2004</bibRefCitation>
|
||||
). A backbone tree for
|
||||
<taxonomicName genus="Pleosporaceae" lsidName="Pleosporaceae" pageId="15" pageNumber="40" rank="genus">Pleosporaceae</taxonomicName>
|
||||
<taxonomicName id="03428B3FB5F0CDE5FF8FD9B6CC579F8F" genus="Pleosporaceae" lsidName="Pleosporaceae" pageId="15" pageNumber="40" rank="genus">Pleosporaceae</taxonomicName>
|
||||
was provided by
|
||||
<bibRefCitation author="Ariyawansa, HA" journalOrPublisher="Fungal Divers" pageId="27" pageNumber="52" pagination="1 - 248" title="Fungal diversity notes 111 - 252: taxonomic and phylogenetic contributions to fungal taxa." url="https://doi.org/10.1007/s13225-015-0346-5" volume="75" year="2015 a">Ariyawansa et al. (2015a)</bibRefCitation>
|
||||
<bibRefCitation id="5A319CE05277F4A0E7362BE361E5CE1C" author="Ariyawansa, HA" journalOrPublisher="Fungal Divers" pageId="27" pageNumber="52" pagination="1 - 248" title="Fungal diversity notes 111 - 252: taxonomic and phylogenetic contributions to fungal taxa." url="https://doi.org/10.1007/s13225-015-0346-5" volume="75" year="2015 a">Ariyawansa et al. (2015a)</bibRefCitation>
|
||||
. In this study,
|
||||
<taxonomicName class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Alternaria burnsii" order="Pleosporales" pageId="15" pageNumber="40" phylum="Ascomycota" rank="species" species="burnsii">Alternaria burnsii</taxonomicName>
|
||||
<taxonomicName id="CCF1601ECD3D220DED8C4D5D4D80D4F8" class="Dothideomycetes" family="Pleosporaceae" genus="Alternaria" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Alternaria burnsii" order="Pleosporales" pageId="15" pageNumber="40" phylum="Ascomycota" rank="species" species="burnsii">Alternaria burnsii</taxonomicName>
|
||||
is reported from a
|
||||
<taxonomicName class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="15" pageNumber="40" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
<taxonomicName id="E5BAF5930C7B1EB27DA16500834B92FB" class="Liliopsida" family="Pandanaceae" genus="Pandanus" higherTaxonomySource="CoL" kingdom="Plantae" lsidName="Pandanus" order="Pandanales" pageId="15" pageNumber="40" phylum="Tracheophyta" rank="genus">Pandanus</taxonomicName>
|
||||
sp. host in Thailand.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
|
|
|
|||
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