diff --git a/data/03/80/37/0380375D5D25FFFEBA02FC6F2C2FFDC0.xml b/data/03/80/37/0380375D5D25FFFEBA02FC6F2C2FFDC0.xml new file mode 100644 index 00000000000..ec102752106 --- /dev/null +++ b/data/03/80/37/0380375D5D25FFFEBA02FC6F2C2FFDC0.xml @@ -0,0 +1,124 @@ + + + +Opening the Trojan horse: phylogeny of Astyanax, two new genera and resurrection of Psalidodon (Teleostei: Characidae) + + + +Author + +Terán, Guillermo E. + + + +Author + +Benitez, Mauricio F. + + + +Author + +Mirande, J. Marcos + +text + + +Zoological Journal of the Linnean Society + + +2020 + +190 + + +1217 +1234 + + + +journal article +0024-4082 +4D0EA0E-4759-4DFB-87CF-D2085293A2F8 + + + + + + + +MAKUNAIMA + + + +gen. nov. + + + + +LSID: + +urn:lsid:zoobank. org:act: +F38D65AB-344D-4752-84B3-801D7F9E613B + + + + + + +Type +species: + + +Astyanax guaporensis +Eigenmann, 1911 + +. + + +New combinations: + +Makunaima guaporensis +( +Eigenmann, 1911 +) + +c o m b. n o v. +, +M a k u n a i m a g u i a n e n s i s +(E i g e n m a n n, 1 9 0 9) +c o m b. n o v. +, + +Makunaima multidens +( +Eigenmann, 1908 +) + + +comb. nov. + + + + +Diagnosis: +Makunaima + +is diagnosed from the remaining Stethaprioninae by the following combination of characters: presence of two rows of teeth in the premaxilla, with five or six in the inner row, a naked caudal fin, +circuli +absent on posterior field of scales, more than five maxillary teeth, dorsal expansion of the rhinosphenoid present, base of the teeth from inner premaxillary row as broad as distal portion, a single tubule for passage of blood vessels on lamellar portion of the maxilla, complete lateral line with 31 to 35 perforated scales and the caudal fin hyaline or with a blotch but always lacking a black longitudinal stripe. + + +S y n a p o m o r p h i e s: M a k u n a i m a +i s r e c o v e r e d a s monophyletic, supported by four morphological synapomorphies: posterior laterosensory pore of pterotic aligned with ventral pore (119:1), dentary teeth abruptly decreasing in size (207:1), posterior margin of quadrate reaching a vertical line through tip of symplectic (234:0) and the opercle with pronouncedly concave posterior margin (252:1). + + +Etymology: +Makunaima +(also spelled as Macunaima or Makonaima) is a god of creation in the mythology of several Amazonian tribes. According to legend, +Makunaima +created animals and a great tree from which all food plants grew. Gender: masculine. + + + + \ No newline at end of file diff --git a/data/03/80/37/0380375D5D27FFFDB8A7FC4E2C23FC1C.xml b/data/03/80/37/0380375D5D27FFFDB8A7FC4E2C23FC1C.xml new file mode 100644 index 00000000000..f1c92d917f5 --- /dev/null +++ b/data/03/80/37/0380375D5D27FFFDB8A7FC4E2C23FC1C.xml @@ -0,0 +1,142 @@ + + + +Opening the Trojan horse: phylogeny of Astyanax, two new genera and resurrection of Psalidodon (Teleostei: Characidae) + + + +Author + +Terán, Guillermo E. + + + +Author + +Benitez, Mauricio F. + + + +Author + +Mirande, J. Marcos + +text + + +Zoological Journal of the Linnean Society + + +2020 + +190 + + +1217 +1234 + + + +journal article +0024-4082 +4D0EA0E-4759-4DFB-87CF-D2085293A2F8 + + + + + + + +TETRAGONOPTERUS + + +CUVIER +, 1816 + + + + + + + + +Type +species: + + +Tetragonopterus argenteus +Cuvier, 1816 + +. + + +New combinations: + +Tetragonopterus daguae +( +Eigenmann, 1913 +) + +, + +comb. nov. + + + + +Diagnosis: +Tetragonopterus + +is diagnosed by the following combination of characters: a deep and compressed body, two rows of premaxillary teeth with the inner row generally consisting of five or more teeth, a flattened prepelvic area that is bounded laterally by well-marked angles and a complete lateral line with an anterior portion that is strongly bent downwards ( +Eigenmann, 1917 +). Species of this genus are also recognizable, as mentioned by + +Silva +et al +. (2017) + +, by a deep body, complete lateral line and the presence of pentacuspidate teeth in the inner premaxillary row. + + + +Tetragonopterus daguae + +does not share with the remaining species in the genus the branched name in black were analysed from both morphological and molecular data; taxa in blue from several DNA markers plus some morphological characters coded from literature; taxa in red from just one DNA marker ( +COI +) plus some morphological characters coded from literature; and taxa in green analysed only from morphological data. The expression ‘best searches’ refers to the calculations of overall parsimony explained in the text. + + +laterosensory canal in the sixth infraorbital and has four supraneurals instead of the three proposed by + +Silva +et al +. (2017) + +to be synapomorphic for + +Tetragonopterus + +. However, the coded specimen of + +T. argenteus + +had four supraneurals, suggesting an intraspecific variation that could be present also in other species of the genus. + + +Synapomorphies: +With the addition of + +Tetragonopterus daguae + +, the genus is supported by: ten ethmoid cartilage distant from lateral ethmoids (40:1), sphenotic spine long and reaching hyomandibular dorsal margin (47:1), supraoccipital spine extended dorsal to entire neural complex of Weberian apparatus (61:0), laterosensory pore anterior to dilatator fossa oriented dorsomedially (115:0), five teeth in the inner premaxillary series (182:0), dentary teeth abruptly decreasing in size (207:1), metapterygoid foramen for passage of the pseudobranch artery as an oblique canal through the metapterygoid (228:1), axis of supraneurals dorsally bifurcated (396:1), bony lamellae developed on supraneurals (397:1) and the presence of iii dorsal-fin rays with the anterior one visible only in c&s specimens (404:1). + + + +STEVARDIINAE + +: +ERETMOBRYCONINI + + + + \ No newline at end of file diff --git a/data/03/80/37/0380375D5D2AFFF1BA7BFA782A1CF8AB.xml b/data/03/80/37/0380375D5D2AFFF1BA7BFA782A1CF8AB.xml new file mode 100644 index 00000000000..71c89648fa0 --- /dev/null +++ b/data/03/80/37/0380375D5D2AFFF1BA7BFA782A1CF8AB.xml @@ -0,0 +1,143 @@ + + + +Opening the Trojan horse: phylogeny of Astyanax, two new genera and resurrection of Psalidodon (Teleostei: Characidae) + + + +Author + +Terán, Guillermo E. + + + +Author + +Benitez, Mauricio F. + + + +Author + +Mirande, J. Marcos + +text + + +Zoological Journal of the Linnean Society + + +2020 + +190 + + +1217 +1234 + + + +journal article +0024-4082 +4D0EA0E-4759-4DFB-87CF-D2085293A2F8 + + + + + + + +ANDROMAKHE + + + +gen. nov. + + + + +LSID:lsid:zoobank.org:act: +74BC5B28-B3E7-46D2- A5FA-532728B096E2 +AQ17 + + + + + +Type +species: + + +Astyanax latens + +Mirande +et al. +, 2004 + + +. + + +New combinations: + +Andromakhe latens +( + +Mirande +et al. +, 2004 + +) + + +comb. nov. + +, + +Andromakhe paris +(Azpelicueta +et al. +, 2002b) + + +comb. nov. + +, + +Andromakhe saguazu +( + +Casciotta +et al. +, 2003a + +) + + +comb. nov. + +, + +Andromakhe stenohalina +( +Messner, 1962 +) + + +comb. nov. + +, + +Andromakhe tupi +( + +Azpelicueta +et al. +, 2003 + +) + + + + + \ No newline at end of file diff --git a/data/03/9A/87/039A87FFF740FFDD0591133CFA2CF966.xml b/data/03/9A/87/039A87FFF740FFDD0591133CFA2CF966.xml new file mode 100644 index 00000000000..8635575a64a --- /dev/null +++ b/data/03/9A/87/039A87FFF740FFDD0591133CFA2CF966.xml @@ -0,0 +1,120 @@ + + + +Hide-and-seek with hoverflies: Merodon aureus - a species, a complex or a subgroup? + + + +Author + +Vujić, Ante + + + +Author + +Zorić, Ljiljana Šašić + + + +Author + +Ačanski, Jelena + + + +Author + +Likov, Laura + + + +Author + +Radenković, Snežana + + + +Author + +Djan, Mihajla + + + +Author + +Milić, Dubravka + + + +Author + +Šebić, Anja + + + +Author + +Ranković, Milica + + + +Author + +Khaghaninia, Samad + +text + + +Zoological Journal of the Linnean Society + + +2020 + +190 + + +974 +1001 + + + +journal article +0024-4082 +3A3CAA9-85B9-47F3-B657-06DA9A2897CB + + + + + + + +MERODON +AUREUS + +SUBGROUP + +SENSU + +ŠAŠIĆ + +ET +AL + +. (2016) + + + + + + +Diagnosis: +Species with golden reflection and rough punctate scutum and terga ( +Fig. 11 +). Mesonotum (in both sexes) and terga (in male) covered with only pale pile, reddish to yellow-grey. Tibiae and tarsi predominantly black ( +Fig. 11B +). Terga uniformly dark. + + + + \ No newline at end of file diff --git a/data/03/9A/87/039A87FFF741FFDC05A115DBFD7BF902.xml b/data/03/9A/87/039A87FFF741FFDC05A115DBFD7BF902.xml new file mode 100644 index 00000000000..af7d3fa7e78 --- /dev/null +++ b/data/03/9A/87/039A87FFF741FFDC05A115DBFD7BF902.xml @@ -0,0 +1,401 @@ + + + +Hide-and-seek with hoverflies: Merodon aureus - a species, a complex or a subgroup? + + + +Author + +Vujić, Ante + + + +Author + +Zorić, Ljiljana Šašić + + + +Author + +Ačanski, Jelena + + + +Author + +Likov, Laura + + + +Author + +Radenković, Snežana + + + +Author + +Djan, Mihajla + + + +Author + +Milić, Dubravka + + + +Author + +Šebić, Anja + + + +Author + +Ranković, Milica + + + +Author + +Khaghaninia, Samad + +text + + +Zoological Journal of the Linnean Society + + +2020 + +190 + + +974 +1001 + + + +journal article +0024-4082 +3A3CAA9-85B9-47F3-B657-06DA9A2897CB + + + + + + +MERODON AUREUS +SUBGROUP + +983 + + + + +Figure 5. +NJ phenogram constructed using squared Mahalanobis distances of wing shape for populations of species of the + +Merodon aureus +subgroup + +. + + + + +Table 3. +Tests of niche overlap (Schoener’s D) and niche similarity for species of + +Merodon aureus +subgroup + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
+ +Merodon species + + +Niche overlap + +Niche similarity test (± SD) +
+A + +B + +A vs. B + +B vs. A +
+ +M. albidus + + + +M. aureus + +0.000720.00215 ± 0.00072**0.00455 ± 0.00148**
+ +M. albidus + + + +M. calidus + +0.001290.00699 ± 0.00396**0.00432 ± 0.00142**
+ +M. albidus + + + +M. ortus + +0.000800.00076 ± 0.00047NS0.00601 ± 0.00111**
+ +M. albidus + + + +M. pumilus + +0.001390.00180 ± 0.00036**0.00196 ± 0.00082**
+ +M. albidus + + + +M. unicolor + +0.001370.00067 ± 0.00028**0.00257 ± 0.00088**
+ +M. aureus + + + +M. calidus + +0.305450.26057 ± 0.03193**0.22887 ± 0.01947**
+ +M. aureus + + + +M. ortus + +0.001460.00338 ± 0.00153**0.00489 ± 0.00153**
+ +M. aureus + + + +M. pumilus + +0.000870.10982 ± 0.04063**0.00306 ± 0.00102**
+ +M. aureus + + + +M. unicolor + +0.019240.00184 ± 0.00064**0.00192 ± 0.00054**
+ +M. calidus + + + +M. ortus + +0.000740.00366 ± 0.00147**0.00788 ± 0.00219**
+ +M. calidus + + + +M. pumilus + +0.001870.00648 ± 0.00046**0.00662 ± 0.00172**
+ +M. calidus + + + +M. unicolor + +0.001230.00334 ± 0.00086**0.00628 ± 0.00255**
+ +M. ortus + + + +M. pumilus + +0.000770.00840 ± 0.00062**0.00184 ± 0.00110**
+ +M. ortus + + + +M. unicolor + +0.001980.00287 ± 0.00054**0.00242 ± 0.00084**
+ +M. pumilus + + + +M. unicolor + +0.213290.28691 ± 0.03521**0.24599 ± 0.03617**
+ + +Symbols: ** ecological niches are significantly (** +P +≤ 0.01) more similar or different than expected by chance. Abbreviations: NS, non-significant; +SD +, standard deviation. + + + + +Based on the results of integrative taxonomic studies, three taxa belong to this subgroup: two complexes ( + +Merodon aureus + +complex and + +M. unicolor + +complex) and one species + +M. pumilus +Macquart + +in Lucas, 1849. + + + + \ No newline at end of file diff --git a/data/03/9A/87/039A87FFF75BFFC105AF13FFFE04FDC3.xml b/data/03/9A/87/039A87FFF75BFFC105AF13FFFE04FDC3.xml new file mode 100644 index 00000000000..d572fc677a9 --- /dev/null +++ b/data/03/9A/87/039A87FFF75BFFC105AF13FFFE04FDC3.xml @@ -0,0 +1,222 @@ + + + +Hide-and-seek with hoverflies: Merodon aureus - a species, a complex or a subgroup? + + + +Author + +Vujić, Ante + + + +Author + +Zorić, Ljiljana Šašić + + + +Author + +Ačanski, Jelena + + + +Author + +Likov, Laura + + + +Author + +Radenković, Snežana + + + +Author + +Djan, Mihajla + + + +Author + +Milić, Dubravka + + + +Author + +Šebić, Anja + + + +Author + +Ranković, Milica + + + +Author + +Khaghaninia, Samad + +text + + +Zoological Journal of the Linnean Society + + +2020 + +190 + + +974 +1001 + + + +journal article +0024-4082 +3A3CAA9-85B9-47F3-B657-06DA9A2897CB + + + + + + + +MERODON +UNICOLOR + +STROBL +IN + + + + + +CZERNY +& +STROBL +, 1909 + + + + + +Diagnosis: +Complete body pile whitish, except few black ones on frons; eye pile white ( +Figs 12D +, +17C +) (black at least in upper half in + +M. aureus + +and + +M. pumilus + +); pile on metafemora whitish ( +Fig. 18B, C +); + + +eye contiguity between 15 and 20 ommatidia, slightly shorter than length of vertical triangle ( +Fig. 12D +). + + +Material examined: +Type material: + +Merodon aeneus unicolor +Strobl + +in +Czerny & Strobl, 1909: 203 +. Type locality: Spain. + +Merodon unicolor + +was described as a variety of + +M. aeneus +Megerle + +in +Meigen, 1822 +from a single male. +Holotype +♂ +, +SPAIN +, Escorial + +‘v. +unicolor + +m / Spain. / Typus’ (NMBA). + + +Biology and preferred habitat: + +Marcos-García +et al. +(2007) + +and +Speight (2018) +revealed some biological data. +Preferred environment: +Forest/open ground; well-drained, non-calcareous, montane and subalpine unimproved grassland; hedgehog heath; open, grassy areas in montane + +Betula + +and + +Pinus + +forest, up to and including + +Pinus uncinata + +forest in the Pyrenees. +Adult habitat and habits +: Fast-flying, at up to +1.5 m +from the ground, through and around tall ground vegetation. +Flowers visited: + +Anthemis mixta +L. +Flight + +period: +April to September. + + +Distribution: +Distributed in south-western Europe across the Iberian Peninsula: the Pyrenees in +France +, +Andorra +and +Spain +, and mountainous areas in +Spain +. The elevation range is from sea level to +2400 m +( +Figs 8 +, +16 +). + + + + \ No newline at end of file diff --git a/data/03/9A/87/039A87FFF75CFFC1055517BAFA2CF966.xml b/data/03/9A/87/039A87FFF75CFFC1055517BAFA2CF966.xml new file mode 100644 index 00000000000..2dfde5c0874 --- /dev/null +++ b/data/03/9A/87/039A87FFF75CFFC1055517BAFA2CF966.xml @@ -0,0 +1,236 @@ + + + +Hide-and-seek with hoverflies: Merodon aureus - a species, a complex or a subgroup? + + + +Author + +Vujić, Ante + + + +Author + +Zorić, Ljiljana Šašić + + + +Author + +Ačanski, Jelena + + + +Author + +Likov, Laura + + + +Author + +Radenković, Snežana + + + +Author + +Djan, Mihajla + + + +Author + +Milić, Dubravka + + + +Author + +Šebić, Anja + + + +Author + +Ranković, Milica + + + +Author + +Khaghaninia, Samad + +text + + +Zoological Journal of the Linnean Society + + +2020 + +190 + + +974 +1001 + + + +journal article +0024-4082 +3A3CAA9-85B9-47F3-B657-06DA9A2897CB + + + + + + + +MERODON +PUMILUS + +MACQUART +IN +LUCAS +, 1849 + + + + + + +Diagnosis: +Eye pile black at least in upper half; eye contiguity in male short, between 5 and 10 ommatidia, about two times shorter than length of vertical triangle ( +Fig. 12C +); female of + +M. pumilus + +( +Fig. 17A +) similar to + +M. aureus + +, but differs with shorter distance between posterior ocellus and eye margin (in +Fig. 13B +: yellow line) comparing distance between two posterior ocelli (in +Fig. 13B +: pink line), while in + +M. aureus + +distance between two posterior ocelli (in +Fig. 13A +: pink line) comparing distance between posterior ocellus and eye margin (in +Fig. 13A +: yellow line) shorter; ocellar triangle isosceles, two lateral sides shorter than basal ( +Fig. 13A +); pile on metafemora pale ( +Fig. 18A +). + + +Material examined: +Type material: + +Merodon pumilus +Macquart in Lucas, 1849 + +: 466. Type locality: Algeria, +Constantine +. + +Merodon pumilus + +was described from a single female. +Holotype +: +♀ +, +ALGERIA +, +Constantine +, + +‘ +pumilus +Macq. + +sp. nova +/ Type’ (MNHN). + + +Biology and preferred habitat: + +Marcos-García +et al. +(2007) + +and +Speight (2018) +listed some biological data. +Preferred environment: +Forest/open ground; open areas in thermophilous + +Quercus + +forest and evergreen oak forest; maquis and matorral; xeric grassland. +Adult habitat and habits: +No data. +Flowers visited: +Apiaceae +; + +Anthericum ramosum + +, + +Leucanthemum vulgare + +, + +Mentha + +, + +Ranunculus + +, + +Solidago + +, + +Taraxacum + +. +Flight period: +April to June. + + +Distribution: +Distributed in north-western parts of Africa (the Atlas mountain range in +Morocco +, +Algeria +and +Tunisia +) and south-western parts of Europe ( +Portugal +and +Spain +). According to available data, the elevation range is from sea level to +1700 m +( +Figs 9 +, +16 +). + + + + \ No newline at end of file diff --git a/data/03/9A/87/039A87FFF75CFFC106CB1162FAA4FCF5.xml b/data/03/9A/87/039A87FFF75CFFC106CB1162FAA4FCF5.xml new file mode 100644 index 00000000000..92fac43cbdc --- /dev/null +++ b/data/03/9A/87/039A87FFF75CFFC106CB1162FAA4FCF5.xml @@ -0,0 +1,405 @@ + + + +Hide-and-seek with hoverflies: Merodon aureus - a species, a complex or a subgroup? + + + +Author + +Vujić, Ante + + + +Author + +Zorić, Ljiljana Šašić + + + +Author + +Ačanski, Jelena + + + +Author + +Likov, Laura + + + +Author + +Radenković, Snežana + + + +Author + +Djan, Mihajla + + + +Author + +Milić, Dubravka + + + +Author + +Šebić, Anja + + + +Author + +Ranković, Milica + + + +Author + +Khaghaninia, Samad + +text + + +Zoological Journal of the Linnean Society + + +2020 + +190 + + +974 +1001 + + + +journal article +0024-4082 +3A3CAA9-85B9-47F3-B657-06DA9A2897CB + + + + + + + +MERODON +ALBIDUS + +ŠAŠIĆ +ZORIĆ + +ET +AL + +. + + + +SP +. +NOV +. + + + + + +Lsid: + +urn:lsid:zoobank.org:act: +031C530F-28A2-4C79- 9A60-6C865C9A168E + + + + + +Diagnosis: +Differs from + +M. unicolor + +based on +COI +gene sequences divergence ( +Fig. 11 +) and morphometric character of the wing ( +Fig. 13C +). + + +Derivatio nominis: +The Latin adjective + +albidus + +, white, refers to white pilosity of the body of this species. + + +Material examined: + +Type material: +Holotype +♂ +, +TURKEY +: +Isparta +, +Keçiborlu +, +Gülköy +, + +22.vi.2015 + +, + +1502 m + +, +37.9683N +30.2594E +, +A. Vujić +, +Hayat +, +Gök +, +Uzal +leg. ( +EMIT +, 09932). – +Paratypes +TURKEY +: +1♂ +, +Bolu +, above +Göynük +, + + +17.v. +1960 + + +, 610 m, +40.4002N +30.7883E +, +Guichard +, +Harvey +leg. ( +BMNH +, 04358); +1♀ +, +Ankara +, +Ankara +, + +24.vi.1984 + +, +39.9272N +32.8644E +, +Lucas +leg. ( +NBCN +, AM-05-109); +3♀♀ +, +Ankara +, +10 km +from +Ankara +, + +05.vi.1988 + +, +39.9272N +32.8644E +, +Warncke +leg. ( +NBCN +, AM-05-108, AM-05-113); +1♀ +, +Muğla +, +16 km +NNW from +Üzümlü +, brooklet near +Kukpunar +, + +28.v.2000 + +, + +1350 m + +, +36.7336N +29.2333E +, +Smit +leg. ( +J. S. +coll., 04063); +5♀♀ +, +Isparta +, +Keçiborlu +, +Gülköy +, + +22.vi.2015 + +, + +1502 m + +, +37.9683N +30.2594E +, +A. Vujić +, +Hayat +, +Gök +, +Uzal +leg. ( +EMIT +, 09931, 09933, 09934, 09935, 09936); +2♀♀ +, +Isparta +, +Keçiborlu +, +Kavak +– +Kapanlı Arası +( +II +) + +, + + +22.vi.2015 + +, + +1500 m + +, +37.9269N +30.1908E +, +A. Vujić +, +Hayat +, +Gök +, +Uzal +leg. ( +EMIT +, 09939, 09940,); +1♀ +, +Isparta +, Keçiborlu, Kozluca– Gülköy Yolu, + +22.vi.2015 + +, 1522, +37.8981N +30.1830E +, +A. Vujić +, Hayat, Gök, +Uzal +leg. ( +EMIT +, 09938); +1♀ +, +Burdur +, +Burdur +Aziziye Yolu +—1 -, + +02.vii.2015 + +, + +1300 m + +, +37.5622N +30.1780E +, +A. Vujić +, +Hayat +, +Uzun +, +Uzal +, +Gök +, +Demirözer +leg ( +EMIT +, 09937) + +. + + +Distribution: +Mountainous species, distributed in south-western and north-western +Turkey +( +Fig. 7 +). According to available data, the elevation range is from +610 to 1522 m +( +Fig. 16 +). + + +SPECIES +NOT +PART +OF +A +COMPLEX + + + + \ No newline at end of file diff --git a/data/03/E0/B2/03E0B25EBF35E30BFC9AFB9A88EF6AFF.xml b/data/03/E0/B2/03E0B25EBF35E30BFC9AFB9A88EF6AFF.xml new file mode 100644 index 00000000000..10a71738eef --- /dev/null +++ b/data/03/E0/B2/03E0B25EBF35E30BFC9AFB9A88EF6AFF.xml @@ -0,0 +1,81 @@ + + + +Phylogenetic relationships and classification of the Chloropinae of the world (Diptera: Chloropidae) + + + +Author + +Riccardi, Paula Raile + + + +Author + +Amorim, Dalton De Souza + +text + + +Zoological Journal of the Linnean Society + + +2020 + +190 + + +889 +941 + + + +journal article +0024-4082 +9C52435-E342-41A1-87AA-EC1D6C8B1497 + + + + + + + +Chloropellini +trib. nov. + +( +Figs 39 +, +116 +) + + + + +lsid: + +urn:lsid:zoobank.org:act: +29899D37-3E82-462C-84CF-327EF61ED1B5 + + + + + + +Type +genus: + + +Chloropella +Malloch, 1925 + +. + + +Diagnosis: +Long ocellar setae; up to four long fronto-orbitals; frons not projected beyond level of eyes; presence of dorsocentral seta close to scutum suture; combination of 1 + 1 notopleurals; tibial organ absent; long surstyli. + + + + \ No newline at end of file diff --git a/data/03/F5/87/03F587BAFF83FFB45E7521E7F7CCF9A0.xml b/data/03/F5/87/03F587BAFF83FFB45E7521E7F7CCF9A0.xml new file mode 100644 index 00000000000..ac25aec185a --- /dev/null +++ b/data/03/F5/87/03F587BAFF83FFB45E7521E7F7CCF9A0.xml @@ -0,0 +1,1336 @@ + + + +A new species of deropristid trematode from the sterlet Acipenser ruthenus (Actinopterygii: Acipenseridae) and revision of superfamily affiliation of the family Deropristidae + + + +Author + +Sokolov, Sergey + + + +Author + +Voropaeva, Ekaterina + + + +Author + +Atopkin, Dmitry + +text + + +Zoological Journal of the Linnean Society + + +2020 + +190 + + +448 +459 + + + +journal article +0024-4082 +93E8C8F-A240-49AC-9384-4BF0B3C27AEB + + + + + + +SKRJABINOPSOLUS +NUDIDORSALIS + + + +SP +. +NOV +. + + + + + + + +( + +FIGS +2A–D + +, +3A +, +4A +) + + +ZooBank registration LSID: +http://www.zoobank. o r g /u r n:l s i d:z o o b a n k.o r g:a c t: +0C B5 4 0A C - F4 7 1- 4C92-AEC4-80F5AD9F5A53 + + + +Table 1. +List of previously published sequences used in the phylogenetic analysis + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Species18S rRNA gene28S rRNA geneReference
+ +Acanthocolpidae + +
+ +Pleorchis polyorchis +(Stossich, 1889) + +DQ248202DQ248215 + +Bray +et al. +(2005) + +
+ +Pleorchis uku +Yamaguti, 1970 + +DQ248203DQ248216 + +Bray +et al. +(2005) + +
+ +Stephanostomum baccatum +(Nicoll, 1907) + +DQ248205DQ248218 + +Bray +et al. +(2005) + +
+ +Stephanostomum bicoronatum +(Stossich, 1883) + +DQ248212DQ248225 + +Bray +et al. +(2005) + +
+ +Stephanostomum cesticillus +( +Molin, 1858 +) + +DQ248213DQ248226 + +Bray +et al. +(2005) + +
+ +Stephanostomum interruptum +Sparks & Thatcher, 1958 + +DQ248210DQ248223 + +Bray +et al. +(2005) + +
+ +Stephanostomum gaidropsari +Bartoli & Bray, 2001 + +DQ248208DQ248221 + +Bray +et al. +(2005) + +
+ +Stephanostomum minutum +(Looss, 1901) + +DQ248211DQ248224 + +Bray +et al. +(2005) + +
+ +Stephanostomum pristis +(Deslongchamps, 1824) + +DQ248209DQ248222 + +Bray +et al. +(2005) + +
+ +Stephanostomum tantabiddii +Bray & Cribb, 2004 + +DQ248207DQ248220 + +Bray +et al. +(2005) + +
+ +Tormopsolus orientalis +Yamaguti, 1934 + +DQ248204DQ248217 + +Bray +et al. +(2005) + +
+ +Aephnidiogenidae + +
+ +Tetracerasta blepta +Watson, 1984 + +L06670– +Blair & Barker (1993) +
–FJ788494 + +Bray +et al. +(2009) + +
+ +Allocreadiidae + +
+ +Allocreadium neotenicum +Peters, 1957 + +JX983204JX977132 +Bray +et al. +(2012) +
+ +Apocreadiidae + +
+ +Homalometron armatum +(MacCallum, 1895) + +AY222130AY222241 + +Olson +et al. +(2003) + +
+ +Homalometron synagris +(Yamaguti, 1953) + +AJ287523– + +Cribb +et al. +(2001) + +
–AY222243 + +Olson +et al. +(2003) + +
+ +Neoapocreadium splendens +Cribb & Bray, 1999 + +AJ287543– + +Cribb +et al. +(2001) + +
–AY222242 + +Olson +et al. +(2003) + +
+ +Schistorchis zancli +Hanson, 1953 + +AY222129AY222240 + +Olson +et al. +(2003) + +
+ +Atractotrematidae + +
+ +Atractotrema sigani +Durio & Manter, 1969 + +AJ287479– + +Cribb +et al. +(2001) + +
–AY222267 + +Olson +et al. +(2003) + +
+ +Pseudomegasolena ishigakiense +Machida & Kamiya, 1976 + +AJ287569– + +Cribb +et al. +(2001) + +
–AY222266 + +Olson +et al. +(2003) + +
+ +Brachycladiidae + +
+ +Brachycladium goliath +(van Beneden, 1858) + +KR703279KR703279 + +Briscoe +et al. +(2016) + +
+ +Zalophotrema hepaticum +Stunkard & Alvey, 1929 + +AJ224884– + +Cribb +et al. +(2001) + +
–AY222255 + +Olson +et al. +(2003) + +
+ +Dicrocoeliidae + +
+ +Brachylecithum lobatum +(Railliet, 1900) + +AY222144AY222260 + +Olson +et al. +(2003) + +
+ +Dicrocoelium dendriticum +(Rudolphi 1819) + +Y11236–Sandoval H.H. (un-
published)
–AF151939 + +Tkach +et al. +(2000) + +
+ +Lyperosomum collurionis +(Skrjabin & Isaichikov, 1927) + +AY222143AY222259 + +Olson +et al. +(2003) + +
+ +Gorgocephalidae + +
+ +Gorgocephalus kyphosi +Manter, 1966 + +AY222126AY222234 + +Olson +et al. +(2003) + +
+ +Gorgoderidae + +
+ +Degeneria halosauri +(Bell, 1887) + +AJ287497– + +Cribb +et al. +(2001) + +
–AY222257 + +Olson +et al. +(2003) + +
+ +Gorgodera +sp. + +AJ287518– + +Cribb +et al. +(2001) + +
–AY222264 + +Olson +et al. +(2003) + +
+ +Nagmia floridensis +Markell, 1953 + +AY222145AY222262 + +Olson +et al. +(2003) + +
+ +Gyliauchenidae + +
+ +Paragyliauchen arusettae +Machida, 1984 + +AY222127– + +Olson +et al. +(2003) + +
–FJ788503 + +Bray +et al. +(2009) + +
+ +Enenteridae + +
+ +Enenterum aureum +Linton, 1910 + +AY222124AY222232 + +Olson +et al. +(2003) + +
+ + + +Table 1. +Continued + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Species18S rRNA gene28S rRNA geneReference
+ +Koseiria xishaensis +Gu & Shen, 1983 + +AY222125AY222233 + +Olson +et al. +(2003) + +
+ +Haploporidae + +
+ +Elonginurus mugilis +Lü, 1995 + +MH763777MH763761 + +Atopkin +et al. +(2019) + +
+ +Hapladena nasonis +Yamaguti, 1970 + +AY222146AY222265 + +Olson +et al. +(2003) + +
+ +Haploporus benedeni +(Stossich, 1887) + +FJ211228FJ211237 + +Blasco-Costa +et al. + +
(2009)
+ +Lepocreadiidae + +
+ +Preptetos caballeroi +Pritchard, 1960 + +AJ287563– + +Cribb +et al. +(2001) + +
–AY222236 + +Olson +et al. +(2003) + +
+ +Preptetos trulla +(Linton, 1907) + +AY222128AY222237 + +Olson +et al. +(2003) + +
+ +Lissorchiidae + +
+ +Lissorchis kritskyi +Barnhart & Powell, 1979 + +AY222136AY222250 + +Olson +et al. +(2003) + +
+ +Monorchiidae + +
+ +Cableia pudica +Bray, Cribb & Barker, 1996 + +AJ287486– + +Cribb +et al. +(2001) + +
–AY222251 + +Olson +et al. +(2003) + +
+ +Diplomonorchis leiostomi +Hopkins, 1941 + +AY222137AY222252 + +Olson +et al. +(2003) + +
+ +Lasiotocus typicum +(Nicoll, 1912) + +AJ287474– + +Cribb +et al. +(2001) + +
–AY222254 + +Olson +et al. +(2003) + +
+ +Provitellus turrum +Dove & Cribb, 1998 + +AJ287566– + +Cribb +et al. +(2001) + +
–AY222253 + +Olson +et al. +(2003) + +
+ +Opecoelidae + +
+ +Halosaurotrema halosauropsi +(Bray & Campbell, 1996) + +[access +AJ287514– + +Cribb +et al. +(2001) + +
+as + +Gaevskajatrema halosauropsi + +] +
–AY222207 + +Olson +et al. +(2003) + +
+ +Macvicaria macassarensis +(Yamaguti, 1952) + +AJ287533– + +Cribb +et al. +(2001) + +
–AY222208 + +Olson +et al. +(2003) + +
+ +Peracreadium idoneum +(Nicoll, 1909) + +AJ287558– + +Cribb +et al. +(2001) + +
–AY222209 + +Olson +et al. +(2003) + +
+Outgroup +
+ +Caecincola parvulus +Marshall & Gilbert, 1905 + +AY222123AY222231 + +Olson +et al. +(2003) + +
+ +Haplorchis pumilio +(Looss, 1896) + +KX815125KX815125 + +Le +et al. +(2017) + +
+ +Metagonimus miyatai +Saito, Chai, Kim, Lee & Rim, 1997 + +HQ832626HQ832635 +Pornruseetairatn +
+et al +. (2016) +
+ +Metagonimus yokogawai +(Katsurada, 1912) + +HQ832630HQ832639 +Pornruseetairatn +
+et al +. (2016) +
+ +Opisthorchis felineus +(Rivolta, 1884) + +MF077357MF099790 + +Dao +et al. +(2017) + +
+ +Opisthorchis viverrini +(Poirier, 1886) + +JF823987JF823990 + +Thaenkham +et al. + +
(2011)
+ + +Type-host: + +Acipenser ruthenus +Linnaeus, 1758 + +(Actinopterygii: +Acipenseridae +), the sterlet. + + + + +Type +locality: + +Oka River +near +Kletino village +, +Ryazan Oblast +, +Russia +( +54°59′55″ N +, +41°10′56″E +) + +. + + +Type and voucher materials: + +Holotype +IPEE +RAS 1319 +(whole-mounted adult specimen), +11 paratypes +, +IPEE +RAS 1319 –1324 +(whole-mounted adult specimens) and five voucher specimens, +IPEE +RAS 14279 +( +four juvenile +trematodes and 14 280 +one adult +specimen). + + + +Site of infection: +Intestines of adult specimens and stomach of juvenile specimens. + + + + \ No newline at end of file diff --git a/data/27/52/77/27527754FF80FFF4FCAFF9ABFD9BFDE1.xml b/data/27/52/77/27527754FF80FFF4FCAFF9ABFD9BFDE1.xml new file mode 100644 index 00000000000..158b90eb71a --- /dev/null +++ b/data/27/52/77/27527754FF80FFF4FCAFF9ABFD9BFDE1.xml @@ -0,0 +1,121 @@ + + + +Phylogenetic analysis of the subfamily Prodidominae (Arachnida: Araneae: Gnaphosidae) + + + +Author + +Rodrigues, Bruno V. B. + + + +Author + +Rheims, Cristina A. + +text + + +Zoological Journal of the Linnean Society + + +2020 + +190 + + +654 +708 + + + +journal article +0024-4082 +45352ED-D736-49E7-B387-F4374406A129 + + + + + + + + +Prodida +Dalmas 1919: 324 + + +, + +syn. nov. + + + + + + + + +Type +species: + + +Prodidomus rufus +Hentz 1847 + +. + + +Species included: + +Prodidomus longivetris +( +Dalmas, 1919 +) + + +comb. nov. + +; + +P. stella +(Saaristo, 2002) + + +comb. nov. + +. For complete composition see https://wsc.nmbe. ch/specieslist/2459 ( +World Spider Catalog, 2020 +). + + +Diagnosis: +Presence of PLS massive, much thicker than the anterior spinnerets ( +Figs 21L +, +25J +). + + + +Shared characters: +char. 54—Chelicerae + +, paturon, retromargin, escort setae: present ➔ absent; +char. 168—Spinnerets +, ALS, sclerotizaton close to base: present ➔ absent; +char. 182—Spinnerets +, base spigot, Ac, insertion articulation, +type +: simple ➔ insertion annulate, flexible; +char. 203—Spinnerets +(F), ALS, major ampullate gland spigots, mesal spigot: absent ➔ present; +char. 224—Spinnerets +, massive PLS: absent ➔ present; c +har. 289—Epigyne +, vulva, fertilization duct, position: well advanced from the epigastric furrow ➔ posterior, close to the epigastric furrow. + + + + \ No newline at end of file diff --git a/data/27/52/77/27527754FF80FFF5FC48FEC3FB09FADA.xml b/data/27/52/77/27527754FF80FFF5FC48FEC3FB09FADA.xml new file mode 100644 index 00000000000..99a868dcc14 --- /dev/null +++ b/data/27/52/77/27527754FF80FFF5FC48FEC3FB09FADA.xml @@ -0,0 +1,175 @@ + + + +Phylogenetic analysis of the subfamily Prodidominae (Arachnida: Araneae: Gnaphosidae) + + + +Author + +Rodrigues, Bruno V. B. + + + +Author + +Rheims, Cristina A. + +text + + +Zoological Journal of the Linnean Society + + +2020 + +190 + + +654 +708 + + + +journal article +0024-4082 +45352ED-D736-49E7-B387-F4374406A129 + + + + + + + +TRICONGIUS + + +SIMON +, 1893 + + + + + + + + + + +Tricongius +Simon, 1893: 453 + + +. + + + + + + +Oltacloea +Mello-Leitão, 1940: 254 + + +, + +syn. nov. + + + + + + + +Type +species: + + +Tricongius collinus +Simon, 1893 + +. + + +Species included: + +Tricongius amazonicus +Platnick & Hofer, 1990 + +; + +T. beltraoe +(Brescovit & Ramos, 2003) + + +comb. nov. + +; + +T. collinus + +; + +T. mutilata +( +Mello-Leitão, 1940 +) + + +comb. nov. + +; + +T. ribaslangei +(Bonaldo & Brescovit, 1997) + + +comb. nov. + +; + +T. ybyguara +( +Rheims & Brescovit, 2004 +) + + +comb. nov. + + + +Misplaced species: + +Tricongius granadensis +Mello-Leitão, 1941 + +. + + +Diagnosis: +Eyes (when present) widely separated with AME–AME shorter than AME–ALE, sternum with anterior margin less than half maximum width ( +Fig. 11K +) and cymbium with a bunch of thick setae on the ventral-terminal part ( +Fig. 27E +). + + + +Shared characters: +char. 2—Carapace + +, dorsal, posterior margin shape: notched ➔ truncated; +char. 35—Sternum +, anterior margin, width relative to maximum width: more than half ➔ equal or less than half; +char. 200—Spinnerets +(M), ALS, major ampullate gland spigots, mesal spigot: absent ➔ present; +char. 201—Spinnerets +(M), ALS, major ampullate gland spigots, mesal spigot, +type +: nubbin ➔ normal; +char. 245—Palp +, cymbium, ventral, terminal, bunch of thick setae: absent ➔ present. + + + + \ No newline at end of file diff --git a/data/A9/2B/1A/A92B1A06F662F77C120EB4F1FD586D36.xml b/data/A9/2B/1A/A92B1A06F662F77C120EB4F1FD586D36.xml new file mode 100644 index 00000000000..d342e51c4a8 --- /dev/null +++ b/data/A9/2B/1A/A92B1A06F662F77C120EB4F1FD586D36.xml @@ -0,0 +1,276 @@ + + + +Just the once will not hurt: DNA suggests species lumping over two oceans in deep-sea snails (Cryptogemma) + + + +Author + +Zaharias, Paul + + + +Author + +Kantor, Yuri I. + + + +Author + +Fedosov, Alexander E. + + + +Author + +Criscione, Francesco + + + +Author + +Hallan, Anders + + + +Author + +Kano, Yasunori + + + +Author + +Bardin, Jérémie + + + +Author + +Puillandre, Nicolas + +text + + +Zoological Journal of the Linnean Society + + +2020 + +190 + + +532 +557 + + + +journal article +0024-4082 +1C5BDFE-31BA-481D-B269-526669931821 + + + + + + + +CRYPTOGEMMA +AETHIOPICA + +( +THIELE +, 1925) + + + + + + +( + +FIG +. 9 + +) + + + +Pleurotoma aethiopica + +Thiele, + +1925 + + + +. 638 m, off +Somalia +, +East Africa +, +0°27′S +, +42°47.3′E +. (Expedition Deutschen Tiefsee, st. 253). + + + +Pleurotoma fusiformis +Thiele, +1925 + +. 614 m, Niassüdkanal, +0°15.2′N +, +98°08.8′E +. + + + +Gemmula thielei +Finlay, 1930 + +. (nom. nov. for + +Pleurotoma fusiformis +Thiele, 1925 + +). + + + + + + +† + + +Pleurotoma trincincta +Martin, 1935: 113 + + +, pl. 2, figs 2, 2a. +Buton Island +, south-east +Celebes +. Oligocene + +. + + + +† + +Pinguigemmula okinavensis +McNeil, 1960 + +. +Okinawa +. +Japan +, Shinzato Tuff Member, Miocene or Pliocene. + + + + + +Pinguigemmula luzonica +Powell, 1964: 278 + + +(22–790), pl. 215, figs 3, +4. 326 m +, off Hermana, Menor Island, Luzon Island, +Philippines +. + + + + + + +Pinguigemmula philippinensis + +Powell, 1964: 278 + + + +(22–790), pl. 215, figs 5, + +6. 512 m + +, off +Santiago +, +west Luzon Island +, +Philippines +. + + + + + +Remarks: +This species was not included in the study by + +Puillandre +et al. +(2012) + +. The protoconch is commonly eroded, with PD = +1.05–1.25 mm +, PL = +1.375–1.75 mm +and number of whorls ranging from 4.2 to five. + + +The radula is long, ~ +3.4 mm +in length (0.37 of AL), composed of 77 transverse rows of teeth. The marginal teeth are 150–159 µm long (mean 155 µm, +N += 5, or 1.66% of AL), duplex. The anterior (inner) 0.4 of the tooth length is solid, narrow in dorsal view, awl shaped; in the posterior part the major and accessory limbs are broadly bifurcating, the accessory limb with a clear constriction and bent at about half tooth length, thin, nearly same length as the major limb. The central formation has a long, narrow, sharp, carinated cusp and lateral flaps with distinct posterior and anterolateral margins. The flaps are not completely fused with the cusp ( +Fig. 7E +). + + +The former genus + +Pinguigemmula + +is easily distinguishable from + +Gemmula + +in having a broadly conical spire, a strongly constricted base and a long, straight siphonal canal ( +Powell, 1964 +). Although expressing a broad variety of forms, the molecular analysis resulted in a single species hypothesis. Several species were described based on the sculptural details, such as the number of gemmate cords (one, two or none). The sculpture seems to be correlated with geography, with the forms from the western Indian Ocean having a smooth intersuture sculpture, whereas the forms from the eastern Indian Ocean to the western Pacific Ocean usually possess two or three gemmate cords. Some large specimens of this species have a similar ‘tertiary notch’ to that of + +C. praesignis + +, suggesting sexual dimorphism also for this species ( +Kantor & Sysoev, 1991 +). + + +List of +COI +diagnostic sites (position: character state): +[115: C; 307: A; 418: G]. + + +Distribution: +Found off East Africa to the central Indo-Pacific ( +Fig. 4E +), from a depth of ~400 to ~ +850 m +( +Fig. 5 +). + + + + \ No newline at end of file diff --git a/data/A9/2B/1A/A92B1A06F662F77D1195B736FB2E6C29.xml b/data/A9/2B/1A/A92B1A06F662F77D1195B736FB2E6C29.xml new file mode 100644 index 00000000000..9423231390f --- /dev/null +++ b/data/A9/2B/1A/A92B1A06F662F77D1195B736FB2E6C29.xml @@ -0,0 +1,270 @@ + + + +Just the once will not hurt: DNA suggests species lumping over two oceans in deep-sea snails (Cryptogemma) + + + +Author + +Zaharias, Paul + + + +Author + +Kantor, Yuri I. + + + +Author + +Fedosov, Alexander E. + + + +Author + +Criscione, Francesco + + + +Author + +Hallan, Anders + + + +Author + +Kano, Yasunori + + + +Author + +Bardin, Jérémie + + + +Author + +Puillandre, Nicolas + +text + + +Zoological Journal of the Linnean Society + + +2020 + +190 + + +532 +557 + + + +journal article +0024-4082 +1C5BDFE-31BA-481D-B269-526669931821 + + + + + + + +CRYPTOGEMMA +TIMORENSIS + +( + +TESCH +, 1915 + +) + + + + + + +( + +FIG +. 8L–P + +) + + + + +† + +Pleurotoma timorensis +Tesch, 1915 + +. Timor. Pliocene. + + +† + +Pleurotoma ktolemandoënsis +K. Martin, 1933 + +. Ktolemando. Miocene. + + + + + +Ptychosyrinx timorensis teschi +Powell, 1964: 291 + + +(22– 853), pl. 223, figs 5, +6. 759 m +, north-west off Sipadan Island, Borneo. + + + + + + + +Type +locality: + +Pliocene of Timor Island + +. + + +Remarks: +This species corresponds to PSH 14 of + +Puillandre +et al. +(2012) + +. + + +Protoconch commonly eroded, with +PD += +1–1.2 mm +and +PL += +1.3–1.675 mm +and number of whorls varying from four to 4.5. + + +The radula is medium short, ~ +2.5 mm +in length (0.2 of +AL +), formed of 45 transverse rows of teeth. Marginal teeth are 162–172 µm long (mean 168 µm, +N += 5, or 1.35% of +AL +), duplex. Anterior (inner) one-third of the tooth length is solid, medium broad in dorsal view, lanceolate; in posterior two-thirds the major and accessory limbs are broadly bifurcating, the accessory limb with a clear constriction and bent at about half tooth length, nearly the same length as the major limb. The central formation has a short and obtuse cusp and lateral inconspicuous flaps with indistinct lateral and anterior margins. The posterior margin is thickened and uninterrupted along its length ( +Fig. 7I +). + + +The +type +of this species is a fossil specimen from Timor island ( +Indonesia +/Timor Leste) described by +Tesch (1915) +, and +Martin (1935) +described another similar specimen from Buton island ( +Indonesia +) as + +Pleurotoma ktolemandoënsis + +, without reference to the work of Tesch. However, +Martin (1935) +also recognized the affinities between + +Pleurotoma timorensis + +and + +Pleurotoma ktolemandoënsis + +. Finally, + +Robba +et al. +(1989) + +synonymized + +Pleurotoma ktolemandoënsis + +with + +Pleurotoma timorensis + +. +Powell (1964) +described the subspecies + +Ptychosyrinx timorensis teschi + +based on an extant specimen, which +Sysoev (1996) +elevated to species rank. The argument by both authors for separating the fossil species from the extant species was the ‘much broader’ shell of the extant + +Ptychosyrinx timorensis teschi + +specimen. Examination of the morphological variability of the sequenced specimens shows that the dimensions and shape of fossil specimens are close to the inferred average breadth of the species; some specimens show a broader aperture and a taller last whorl than others, despite having the same number of teleochonch whorls. The results of the LDA show that + +Pleurotoma timorensis + +and + +Ptychosyrinx timorensis teschi + +fall within the variability of the sequenced specimens. The broader last whorl and the generally larger size (~ +30–55 mm +) are characteristic for + +C. timorensis + +when compared with + +C. praesignis + +. + + +List of +COI +diagnostic sites (position: character state): +[73: G; 214: G; 334: G; 511: G]. + + +Distribution: +Found from the western Indian Ocean to the central Indo-Pacific ( +Fig. 4C +), from a depth of ~300 to ~ +1200 m +( +Fig. 5 +). Curiously, this species has not been found in +New Caledonia +, despite considerable sampling effort in this region. + + + + \ No newline at end of file diff --git a/data/A9/2B/1A/A92B1A06F663F77C1229B283FB116D37.xml b/data/A9/2B/1A/A92B1A06F663F77C1229B283FB116D37.xml new file mode 100644 index 00000000000..0f20d7838f4 --- /dev/null +++ b/data/A9/2B/1A/A92B1A06F663F77C1229B283FB116D37.xml @@ -0,0 +1,223 @@ + + + +Just the once will not hurt: DNA suggests species lumping over two oceans in deep-sea snails (Cryptogemma) + + + +Author + +Zaharias, Paul + + + +Author + +Kantor, Yuri I. + + + +Author + +Fedosov, Alexander E. + + + +Author + +Criscione, Francesco + + + +Author + +Hallan, Anders + + + +Author + +Kano, Yasunori + + + +Author + +Bardin, Jérémie + + + +Author + +Puillandre, Nicolas + +text + + +Zoological Journal of the Linnean Society + + +2020 + +190 + + +532 +557 + + + +journal article +0024-4082 +1C5BDFE-31BA-481D-B269-526669931821 + + + + + + + +CRYPTOGEMMA +TESSELLATA + +( + +POWELL +, 1967 + +) + + + + + + +( + +FIG +. 10A–D + +) + + + + + + + +Gemmula tessellata +Powell, 1967: 439 + + +(22–734a), pl. 315. 183– +219 m +, off Waikiki, Oahu Island, Hawaiian Islands (collected by Dr Pat Burgess). + + + + + +Remarks: +This species corresponds to PSH +12 in +the study by + +Puillandre +et al. +(2012) + +. The protoconch of the +holotype +is 4.5 whorls according to +Powell (1967) +, and PD = +1.22 mm +and PL = +1.64 mm +according to measurements inferred from photographs of the +holotype +. The protoconch exhibits high variability, with PD = +1.175–1.3 mm +, PL = + +1.525 +–1.975 +mm + +and consisting of four to 5.5 whorls. + + +The radula is of medium length, ~ +1.2 mm +(0.29 of AL), composed of 51 transverse rows of teeth. The marginal teeth are 86–91 µm long (mean 89 µm, +N += 2, or 2.1% of AL), duplex. The anterior (inner) half of the tooth length is solid, medium broad in dorsal view, triangular. The accessory limb is weak, thin, without constriction, much shorter than the major limb, but of nearly same width (the marginal teeth in +Fig. 8F +are not fully sclerotized). The central formation has a long, sharp and carinated central cusp, slightly curved in profile, and with lateral conspicuous flaps with distinct margins. The flaps are not completely fused with the cusp. The anterior margin of the central formation is strongly concave ( +Fig. 7F +). + + +The ‘light form’ of + +C. tessellata + +has been misidentified by + +Puillandre +et al. +(2012) + +as + +Xenuroturris gemmuloides +Powell, 1967 + +because it shares superficially similar features, such as the white-yellowish shell punctuated with regular brown-orange spots, and the small size (~ +15–25 mm +). The ‘brown-orange form’ of + +C. tessellata + +, closer to the +holotype +, is distinctly different from the ‘light form’ not only in colouration, but also in having a stouter outline and a more tuberculate subsutural fold ( +Powell, 1967 +). Although readily distinguished from the other + +Cryptogemma +species + +owing to its colour pattern and small size, LDA indicates that this species more closely resembles small adults of + +C. praesignis + +. + + +List of +COI +diagnostic sites (position: character state): +[46: C; 61: A; 316: T]. + + +Distribution: +The sequenced specimens were found off +New Caledonia +only, and the +holotype +is from the Hawaiian Islands ( +Fig. 4C +), from a depth of ~200 to ~ +500 m +( +Fig. 5 +). The protoconch characteristics, similar in shape, size and number of whorls to + +C. praesignis + +, imply that the species might have a much broader range than what is currently documented, possibly covering the entire central Pacific. + + + + \ No newline at end of file diff --git a/data/A9/2B/1A/A92B1A06F66BF7741188B70DFAB4698C.xml b/data/A9/2B/1A/A92B1A06F66BF7741188B70DFAB4698C.xml new file mode 100644 index 00000000000..6002017995e --- /dev/null +++ b/data/A9/2B/1A/A92B1A06F66BF7741188B70DFAB4698C.xml @@ -0,0 +1,261 @@ + + + +Just the once will not hurt: DNA suggests species lumping over two oceans in deep-sea snails (Cryptogemma) + + + +Author + +Zaharias, Paul + + + +Author + +Kantor, Yuri I. + + + +Author + +Fedosov, Alexander E. + + + +Author + +Criscione, Francesco + + + +Author + +Hallan, Anders + + + +Author + +Kano, Yasunori + + + +Author + +Bardin, Jérémie + + + +Author + +Puillandre, Nicolas + +text + + +Zoological Journal of the Linnean Society + + +2020 + +190 + + +532 +557 + + + +journal article +0024-4082 +1C5BDFE-31BA-481D-B269-526669931821 + + + + + +GENUS + + +CRYPTOGEMMA + + +DALL +, 1918 + + + + + + + + + +Type +species: + + +Gemmula benthima +Dall, 1908 + +( +OD +) + +. + + + +Ptychosyrinx +Thiele, 1925 + +( +type +species: + +Pleurotoma bisinuata +Martens, 1901 + +– +OD +). + + + + + +Bathybermudia +Haas, 1949 + +( +type +species: + +Bathybermudia carynae +Haas, 1949 + +– OD). + + +† + +Pinguigemmula +McNeil, 1960 + +( +type +species † + +Pinguigemmula okinavensis +McNeil, 1960 + +– OD). + + +Included species: + +Cryptogemma aethiopica +(Thiele, 1925) + +; + +C. periscelida +(Dall, 1889) + +; + +C. phymatias +(Watson, 1886) + +; + +C. powelli + +; + +C. praesignis + +( +Smith +, 1895); + +C. tessellata +( +Powell, 1964 +) + +; + +C. timorensis +( +Tesch, 1915 +) + +; + +C. unilineata +( +Powell, 1964 +) + +. + + +Remarks: +According to WoRMS (checked http://www. marinespecies.org/, +July2019 +), + +Cryptogemma + +comprises 11 species and has never been revised. A consultation of available +type +photographs and published images on + +Cryptogemma +species + +indicated that all 11 species, except the +type +species + +C. benthima + +and + +C. phymatias + +, the senior synonym of + +C. benthima + +, should be excluded from the genus, because the majority of them lack key characters, such as the narrow fusiform shell and the well-marked peripheral anal sinus. Moreover, studied samples from +Japan +, most certainly corresponding to + +Cryptogemma corneus +(Okutani, 1966) + +as pictured by +Hasegawa (2009 +: figs 335–338), showed closer affinity to other conoidean families (e.g. +Horaiclavidae +) than to the +Turridae +, based on both the sequence of the barcode fragment of +COI +and the radular morphology (results not shown). The eight species of + +Cryptogemma + +listed herein have wide distributions, most of them covering the whole Indo-Pacific tropical region, and are not found at depths shallower than + +200 m +. + + +The protoconch consists of four to 5.25 whorls. The shell shape of the teleoconch combined with size is an important factor to distinguish species (see Results section), despite high intraspecific variability.The widest range of variability is observed in shell proportions, with shells with a wide last whorl and long siphonal canal being at one extreme of the range and more elongated shells with short siphonal canal at the other. + + + \ No newline at end of file diff --git a/data/A9/2B/1A/A92B1A06F66BF77A1212B666FB106F65.xml b/data/A9/2B/1A/A92B1A06F66BF77A1212B666FB106F65.xml new file mode 100644 index 00000000000..20be21dac80 --- /dev/null +++ b/data/A9/2B/1A/A92B1A06F66BF77A1212B666FB106F65.xml @@ -0,0 +1,319 @@ + + + +Just the once will not hurt: DNA suggests species lumping over two oceans in deep-sea snails (Cryptogemma) + + + +Author + +Zaharias, Paul + + + +Author + +Kantor, Yuri I. + + + +Author + +Fedosov, Alexander E. + + + +Author + +Criscione, Francesco + + + +Author + +Hallan, Anders + + + +Author + +Kano, Yasunori + + + +Author + +Bardin, Jérémie + + + +Author + +Puillandre, Nicolas + +text + + +Zoological Journal of the Linnean Society + + +2020 + +190 + + +532 +557 + + + +journal article +0024-4082 +1C5BDFE-31BA-481D-B269-526669931821 + + + + + + + +CRYPTOGEMMA +PHYMATIAS + +( +WATSON +, 1886) + + + + + + +( + +FIG +. 6 + +) + + + +Pleurotoma phymatias + +R. B. Watson, + +1886 + + + +. 1920 m, +Philippine Islands +, +16°42′N +, +119°22′E +( +Expedition H.M.S. + +Challenger + +on + +13 November 1874 + +, st. 205). + + + +Gemmula benthima +Dall, +1908 + +. 2323 m, Gulf of +Panama +. + + + + + + +Gemmula benthina + +– + +Dall, 1918: 318 + +( +lapsus calami +); + +Powell, 1964: 279 + +( +lapsus calami +). + + + + +Pleurotoma truncata + +Schepman, + +1913 + + + +. 2798 m, +Banda Sea +, +Indonesia +, +6°24′S +, +124°39′E +. + + + + + +Bathybermudia carynae + +Haas, + +1949 + + + +. 3109 m, off +Bermuda +, +32°08.2′N +, +64°33′W +. + + +Remarks: +This species was not present in the sampling of + +Puillandre +et al. +(2012) + +, but was included in the phylogeny of + +Puillandre +et al. +(2011) + +under the name + +Ptychosyrinx carynae + +. + + + +Owing to the frequent loss of the shell apex, there are few available protoconchs for this species. Only the eroded protoconch of the +type +specimen of + +Bathybermudia carynae + +could be measured, with +PD += +1.3 mm +and +PL +> +1.6 mm +, consisting of more than three whorls + +. + + +The radula is of medium length, ~ +2.6 mm +(0.44 of AL), composed of 74 transverse rows of teeth. Marginal teeth are 118–128 µm long (mean 120 µm, +N += 5), duplex. The anterior (inner) one-third of the tooth length is solid, narrow in dorsal view, pointed; in the posterior two-thirds, major and accessory limbs are broadly bifurcating, and the accessory limb has a clear constriction at about half the tooth length, slightly shorter than the major limb. The central formation has a distinct narrow carinated cusp and lateral inconspicuous flaps with indistinct lateral and anterior margins ( +Fig. 7B, C +). + + + +Figure 4. +Map showing the species distributions. Filled circles represent localities of sequenced specimens. Full triangles represent localities of type specimens. + + + +Although this species can be distinguished from its congeners by the frequent loss of the first whorls, and from its sister species + +Cryptogemma praesignis + +by the slightly larger diameter of the shell, the bathymetry is its most distinct characteristic. + +Cryptogemma praesignis + +is found between ~300 and ~ +1400 m +depth, whereas + +C. phymatias + +is the only +Turridae +, to our knowledge, to be found exclusively below ~ +1400 m +deep. Moreover, it is the only +Turridae +so far, and possibly the first reported benthic gastropod, to have a Pacific–Atlantic distribution ( +Fig. 4 +; see Discussion). Most studied +type +specimens have eroded shells, but the variability of the last whorls, siphonal twist and aperture among them agrees with the variability in the sequenced specimens. Note that the etymology of this species combines ‘ + +Cryptogemma + +’ (hidden gems) and + +‘ +phymatias + +’ (one who has tubercules), resulting in a confusing combination. + + + +Figure 5. +Bathymetric distributions of the eight species. Vertical bars and lines denote ‘confirmed’ and ‘potential’ depth ranges, respectively. As a single trawl/dredge haul accumulate samples from a range of depths, the confirmed shallowest of a species is the deepest point of the shallowest haul with the species, and vice versa for the confirmed deepest. Potential ranges are from the shallowest point of the shallowest haul to the deepest of the deepest haul. + + + +List of +COI +diagnostic sites (position: character state): +[379: T; 493: C; 622: C]. Indexing starts right next to the 3′ end of the LCO1490 primer (from 1 to 658). + + +Distribution: +From the central Indo-Pacific (Banda Sea) to the North Atlantic Ocean ( +Bermuda Island +) ( +Fig. 4A +), from a depth of ~1400 to ~ +3000 m +( +Fig. 5 +). This species is expected to be found in the Indian Ocean, as is the case with other Indo-Pacific species of + +Cryptogemma + +, but it has not been documented there, presumably owing to a lack of sampling at bathyal depths. + + + + \ No newline at end of file diff --git a/data/A9/2B/1A/A92B1A06F67CF76211ADB7ADFEDE6937.xml b/data/A9/2B/1A/A92B1A06F67CF76211ADB7ADFEDE6937.xml new file mode 100644 index 00000000000..0e7dae478d0 --- /dev/null +++ b/data/A9/2B/1A/A92B1A06F67CF76211ADB7ADFEDE6937.xml @@ -0,0 +1,232 @@ + + + +Just the once will not hurt: DNA suggests species lumping over two oceans in deep-sea snails (Cryptogemma) + + + +Author + +Zaharias, Paul + + + +Author + +Kantor, Yuri I. + + + +Author + +Fedosov, Alexander E. + + + +Author + +Criscione, Francesco + + + +Author + +Hallan, Anders + + + +Author + +Kano, Yasunori + + + +Author + +Bardin, Jérémie + + + +Author + +Puillandre, Nicolas + +text + + +Zoological Journal of the Linnean Society + + +2020 + +190 + + +532 +557 + + + +journal article +0024-4082 +1C5BDFE-31BA-481D-B269-526669931821 + + + + + + + +CRYPTOGEMMA +UNILINEATA + +( + +POWELL +, 1967 + +) + + + + + + +( + +FIG +. 10E–H + +) + + + + + + + +Gemmula congener unilineata +Powell, 1967: 437 + + +(22– 716a), pl. +313. 366 m +, off Waikiki, Oahu Island, +Hawaii +(Expedition Pele, +13 June 1964 +). + + + + + +Remarks: +This species corresponds to PSH +13 in +the study by + +Puillandre +et al. +(2012) + +. + + + +The protoconch is commonly retained, with +PD += + +1.075 +–1.275 +mm + +, +PL += + +1.375 +–1.925 +mm + +and the number of whorls ranging from 4.75 to 5.5 + +. + + +The radula is long, ~ +3 mm +in length (0.31 of AL), composed of 99 transverse rows of teeth. The marginal teeth are 121–127 µm long (mean 125 µm, +N += 5, or 1.27% of AL), duplex. The anterior (inner) 0.4 of the tooth length is solid, narrow in dorsal view and awl shaped. In the posterior part, the major and accessory limbs are broadly bifurcating, the accessory limb with a clear constriction and bent at about half the tooth length, slightly shorter than the major limb. The central formation has a long, sharp, carinated cusp and lateral flaps with distinct posterior and anterolateral margins. The flaps are not completely fused with the cusp ( +Fig. 7G +). + + +This species has been named based on the characteristic carinated brown-orange subsutural band. The brown-orange subsutural band has been found in + +C. powelli + +and in some specimens of + +C. praesignis + +, and in other +Turridae +, such as + +Gemmula cosmoi +(Sykes, 1930) + +, but it is generally smoother and thinner than that of + +C. unilineata + +. The LDA indicated that + +C. unilineata + +generally has a more angulated shape on the outer aperture lip of the last whorl, indicating a more concave subsutural ramp in comparison to other + +Cryptogemma + +. However, we note that the convex hulls ( +Fig. 1 +) of + +C. unilineata + +and + +C. powelli + +are greatly overlapping; therefore, the strong carinated brown-orange subsutural band remains the best-suited character for distinguishing + +C. unlineata + +from + +C. powelli + +. + + +List of +COI +diagnostic sites (position: character state): +[172: G; 307: T; 361: G; 370: C]. + + +Distribution: +From East Africa to the central Pacific (Hawaiian and Society Islands) ( +Fig. 7D +), from ~300 to ~ +800 m +deep ( +Fig. 5 +). + + + + \ No newline at end of file diff --git a/data/A9/2B/1A/A92B1A06F67DF76112E0B312FBF76C3B.xml b/data/A9/2B/1A/A92B1A06F67DF76112E0B312FBF76C3B.xml new file mode 100644 index 00000000000..ba80b85ff71 --- /dev/null +++ b/data/A9/2B/1A/A92B1A06F67DF76112E0B312FBF76C3B.xml @@ -0,0 +1,259 @@ + + + +Just the once will not hurt: DNA suggests species lumping over two oceans in deep-sea snails (Cryptogemma) + + + +Author + +Zaharias, Paul + + + +Author + +Kantor, Yuri I. + + + +Author + +Fedosov, Alexander E. + + + +Author + +Criscione, Francesco + + + +Author + +Hallan, Anders + + + +Author + +Kano, Yasunori + + + +Author + +Bardin, Jérémie + + + +Author + +Puillandre, Nicolas + +text + + +Zoological Journal of the Linnean Society + + +2020 + +190 + + +532 +557 + + + +journal article +0024-4082 +1C5BDFE-31BA-481D-B269-526669931821 + + + + + + +CRYPTOGEMMA +POWELLI + + + +SP +. +NOV +. + + + + + + + +( + +FIG +. 11 + +) + + + +urn:lsid:zoobank.org:act: +EC0DAF2A-AD02-4D9D-8970-B49A70385A0A + + + +Type material: +Holotype +MNHN-IM-2013-68787; +paratype +1, MNHN-IM-2007-40795; +paratype +2, MNHN-IM-2007-40765; all live collected and processed for DNA extraction. + + + + +Type +locality: + +New Caledonia +, south-west of +Ile des Pins +, +22°48′S +, +167°15′E +, + +449–465 m +depth + +, sand and debris (Expedition KANACONO, st. DW4697) + +. + + +Etymology: +Named after +New Zealand +malacologist Arthur William Baden Powell CBE (1901–1987), who contributed enormously to the systematics of +Conoidea +and, in particular, who revised the family +Turridae +in 1964 and described several species of + +Cryptogemma + +. + + + +Description ( +holotype +): + +Shell narrowly fusiform, with high spire and medium-long siphonal canal. Protoconch conical, eroded, with a diameter of +1.125 mm +, of about four convex whorls. Teleoconch of nine whorls; suture shallow, impressed. Shell height +38 mm +, aperture height +10.9 mm +and shell diameter +12.5 mm +. Whorls strongly shouldered, with slightly concave shoulder slope, very weakly convex, nearly cylindrical periphery. Spiral sculpture of fine, broadly spaced, wavy, subequal spiral cords on subsutural ramp, ten on last whorl, uppermost being much more pronounced than the others, coloured light orange-brown. Sinus cord strongly gemmate, with gemmules clearly bisected (39 on the body whorl). Spiral cords becoming thicker on whorl periphery, sometimes nodulose, some notably wider than others. Axial sculpture of fine growth lines. Last whorl shortly constricted to long siphonal canal, with 32 cords below the sinus, of which ~20 on canal. Aperture irregular oval, outer lip thin, simple. Anal sinus moderately deep, U-shaped. Shell colour straw-yellow, subsutural cord orange-brown, gemmae slightly lighter than background. + + +Radula medium long, ~ +3.1 mm +in length (0.28 of AL), composed of 75 transverse rows of teeth. Marginal teeth 129–135 µm long (mean 133 µm, +N += 5 or 1.22% of AL), duplex. Anterior (inner) one-third of tooth length solid, lanceolate in dorsal view, in posterior part major and accessory limbs broadly bifurcating; accessory limb with clear constriction at half tooth length, thin, about half the length and width of the major limb. Central formation with medium long and medium broad sharp carinated cusp and lateral flaps with distinct posterior and posterolateral margins. Flaps not completely fused with cusp ( +Fig. 7H +). + + + + +Figure 11. + +Cryptogemma powelli + + +. A–C, holotype, MNHN-IM-2013-68787, KANACONO, New Caledonia. D, lateral view of the protoconch of the paratype 2 MNHN-IM-2007-40765, EBISCO, Chesterfield Islands. E, paratype 1, MNHN-IM-2007-40795, NORFOLK 2, New Caledonia. F, MNHN-IM-2013-55832, TAIWAN 2013, Taiwan. G–I, paratype 2, MNHN-IM-2007-40765, EBISCO, Chesterfield Islands. + + + +Remarks: +This species corresponds to PSH +15 in +the study by + +Puillandre +et al. +(2012) + +. + +Cryptogemma powelli + +exhibits similar intraspecific variation in shell shape to that of its congeners, based on its convex hull area ( +Fig. 1 +). Studied specimens vary in shades of shell colour, from light yellowish to light orange, occasionally with a patchy pattern. In terms of both size and shape, + +C. powelli + +can, in some cases, be undistinguishable from + +C. unilineata + +( +Fig. 1 +). The morphometric analysis shows considerable overlap of the measured shell features between the two species, with the main distinction between them expressed by the second axis. Interpretation of this result suggests that the + +C. powelli + +on average possesses a more concave curvature of the outer aperture lip, in comparison to + +C. unilineata + +. Besides, distinction of + +C. powelli + +and + +C. unilineata + +mostly relies on the degree of pronunciation of the subsutural cord; it is typically not significantly stronger than the succeeding cords in the former species, but is always thick and gemmate in the latter. However, the subsutural cord is thicker in younger specimens, rendering the distinction of juvenile + +C. powelli + +and + +C. unilineata + +specimens problematic. + + +List of +COI +diagnostic sites (position: character state): +[112: G; 322: T; 433: A]. + + +Distribution: +The confirmed distribution of this species based on sequenced specimens ranges from the Indian Ocean to the central Pacific ( +Fig. 4F +), from a depth of ~400 to ~ + +600 m +. + + + + + \ No newline at end of file diff --git a/data/A9/2B/1A/A92B1A06F67DF76211A2B1D3FB4A6B4E.xml b/data/A9/2B/1A/A92B1A06F67DF76211A2B1D3FB4A6B4E.xml new file mode 100644 index 00000000000..469383c1df1 --- /dev/null +++ b/data/A9/2B/1A/A92B1A06F67DF76211A2B1D3FB4A6B4E.xml @@ -0,0 +1,188 @@ + + + +Just the once will not hurt: DNA suggests species lumping over two oceans in deep-sea snails (Cryptogemma) + + + +Author + +Zaharias, Paul + + + +Author + +Kantor, Yuri I. + + + +Author + +Fedosov, Alexander E. + + + +Author + +Criscione, Francesco + + + +Author + +Hallan, Anders + + + +Author + +Kano, Yasunori + + + +Author + +Bardin, Jérémie + + + +Author + +Puillandre, Nicolas + +text + + +Zoological Journal of the Linnean Society + + +2020 + +190 + + +532 +557 + + + +journal article +0024-4082 +1C5BDFE-31BA-481D-B269-526669931821 + + + + + + + +CRYPTOGEMMA +PERISCELIDA + +( +DALL +, 1889) + + + + + + +( + +FIG +. 10I–K + +) + + + +Pleurotoma periscelida + +Dall, + +1889 + + + +. 283 m (USS + +Albatross + +expedition, st. 2143, collected on + +23 March 1884 + +) and + +196 m + +, off +Hatteras +, +North Carolina +. + + +Remarks: +The protoconch is unknown, because it is consistently eroded in all examined material, even in younger specimens. + + +The radula is of medium length (part of youngest section lost),> +1.9 mm +(> 0.22 of AL), composed of> 50 transverse rows of teeth. The marginal teeth are 107– 116 µm long (mean 110 µm, +N += 5 or 1.25% of AL), duplex. The anterior (inner) 0.4 of the tooth length is solid, narrow lanceolate in dorsal view. In the posterior part, the major and accessory limbs are medium broadly bifurcating, and the accessory limb has a clear constriction and is bent at less than half tooth length, thin, nearly the same length and width as major limb. The central formation has a long, narrow, sharp carinated cusp and lateral flaps with distinct posterior and posterolateral margins. The flaps are completely fused with the cusp ( +Fig. 7D +). + + + +This +species has been described from the +Gulf of Mexico +, although specimens from +Suriname +and from the MNHN recent expedition +GUYANE +2014 (French Guiana) were also collected. +This +is the only ‘ + +Gemmula’ + +- like species to be found exclusively in the +Atlantic Ocean +, where it occurs in a depth range of + +200–800 m + +. + + + +List of +COI +diagnostic sites (position: character state): +[352: C, 412: G, 655: C]. + + +Distribution: +Found in the +Gulf +of +Mexico +, north to the Carolina coast and south to +French Guiana +( +Fig. 4B +), from a depth of ~200 to ~ +500 m +( +Fig. 5 +). + + + + \ No newline at end of file diff --git a/data/AB/30/2C/AB302C7FFF9DC85F49E5FF44FBBBB003.xml b/data/AB/30/2C/AB302C7FFF9DC85F49E5FF44FBBBB003.xml new file mode 100644 index 00000000000..cf431fdd604 --- /dev/null +++ b/data/AB/30/2C/AB302C7FFF9DC85F49E5FF44FBBBB003.xml @@ -0,0 +1,463 @@ + + + +Global biodiversity of the genus Ommastrephes (Ommastrephidae: Cephalopoda): an allopatric cryptic species complex + + + +Author + +Fernández-Álvarez, Fernando Á. + + + +Author + +Braid, Heather E. + + + +Author + +Nigmatullin, Chingis M. + + + +Author + +Bolstad, Kathrin S. R. + + + +Author + +Haimovici, Manuel + + + +Author + +Sánchez, Pilar + + + +Author + +Sajikumar, Kurichithara K. + + + +Author + +Ragesh, Nadakkal + + + +Author + +Villanueva, Roger + +text + + +Zoological Journal of the Linnean Society + + +2020 + +190 + + +460 +482 + + + +journal article +0024-4082 +9C6D660-9970-4ED0-943E-067F183867B9 + + + + + + + + +Loligo bartramii +Lesueur, 1821: 90 + + +, pl. 7. + + + + + + +Type material: +Academy of Natural Sciences ( +ANSP +). Not extant [ +fide +Voss (1962: 1) +; + +Lu +et al. +(1995: 312) + +]. + + + + +Neotype +: + +National Museum of Nature +and +Science +, +Tokyo +, specimen NSMT-Mo 67507, mature male, +270 mm +DML +, collected by squid jigging at +41.95°N +, +135.17°W +on + +8 September 2009 + +. + + + +Ty p e l o c a l i t y: +N o t d e s i g n a t e d i n t h e o r i g i n a l description. Here it is designated, based on the +neotype +, as North Pacific waters ( +Table 1 +; +Fig. 3 +) (see ‘Remarks’). + + +Synonyms + + +(?) + +Loligo touchardii +Souleyet, 1852: 22 + +, pl. 2, figs 6–13 [ +fide +Pfeffer (1912: 466) +] +MNHN +Syntype +7-3-724 [ +fide + +Lu +et al. +(1995: 326) + +]. Locality: Pacific Ocean. + + +(?) + +Ommastrephes ensifer +Owen, 1881: 144 + +, pl. 28. + +Type +repository unresolved [ +Royal College of Surgeons +, +London +, +UK +?] + +. +Type +locality not designated. + + +Diagnosis + + + +Ommastrephes + +with a maximal mantle length of +600 mm +and weight of +6 kg +; maximal spermatophore length of +21–41 mm +(9.5 ± 1.45% +DML +), cement body of spermatophore 11%, sperm reservoir 44.7% and posterior empty end 22% of spermatophore length; cytochrome +c +oxidase subunit I diagnostic character: 454, C. + + + +Name of the species in the phylogenetic analyses: +Ommastrephes + +group 4. + + +Distribution: +Temperate North Pacific, from the coasts of +China +( +25°N +) to +Russia +( +60°N +) in the west, and probably from Alaska ( +55°N +) to the Gulf of California ( +20°N +) in the east. The distribution has been confirmed using molecular tools for the majority of its range, excluding north-eastern Pacific waters ( +Fig. 3 +). + + + +Remarks: +Ommastrephes bartramii + +was described as + +Loligo bartramii + +by +Lesueur (1821: 90–92 +, pl. +VII +) and was later transferred to the genus + +Ommastrephes + +by +d’Orbigny (1834 +–1848). In his description, Lesueur did not provide any specific locality for the species, and the +type +specimen no longer exists ( +Voss, 1962: 1 +; + +Lu +et al. +, 1995: 312 + +). The only reference to the origin of the material he examined is that they came ‘from the collection of the academy, and that from the Philadelphia Museum’ ( +Lesueur, 1821: 89 +). Without any further accurate reference, it is possible that the material came from the Philadelphia shores and adjacent waters. However, Lesueur also participated in the Baudin Expedition (1800–1803; see +Péron & Freycinet, 1816 +) from Le Havre ( +France +) to +Australia +, and he might have collected specimens during this cruise, covering the distribution area of + +Ommastrephes + +groups 1, 2 and 3. Based on the available information, it is not possible to exclude any other specimens that were previously donated to the Philadelphia Museum from other localities. Therefore, the +type +locality data of the + +O. bartramii + +type +material remains unresolved and uncertain. + + +Although the type locality remains uncertain, the name ‘ + +Ommastrephes bartramii + +’ has been widely used in the North Pacific, where the only commercial fishery for this squid occurs and where the majority of studies on this genus have been conducted. The International Code of Zoological Nomenclature ( +ICZN +) precludes the substitution of a long-accepted name in its accustomed meaning in order to increase taxonomic stability ( +ICZN +Article 32.2; +International Commission on Zoological Nomenclature, 1999 +). The name + +O. bartramii + +referring to North Pacific individuals (i.e. + +Ommastrephes + +group 4) has been used in> 25 works authored by more than ten researchers in the last 50 years (e.g. +Young & Hirota, 1990 +; + +Sakurai +et al. +, 1995 + +; + +Ichii +et al. +, 2009 + +, 2017; + +Vijai +et al. +, 2015 + +; + +Budyansky +et al. +, 2017 + +; + +Fang +et al. +, 2017 + +; + +Feng +et al. +, 2017 + +, +2018a +, b, 2019; + +Igarashi +et al. +, 2017 + +, +2018 +; +McKinnell & Seki, 2017 +; + +Tang +et al. +, 2017 + +; + +Wang +et al. +, 2017 + +; + +Wen +et al. +, 2017 + +; + +Yu +et al. +, 2017a + +, b, 2018, 2019; + +Hu +et al. +, 2018 + +; + +Jiao +et al. +, 2018 + +; + +Ding +et al. +, 2019 + +; + +Zhang +et al. +, 2019 + +), which is in agreement with the conditions described in the +ICZN +Article 23.9.1.2. Although + +O. bartramii + +is the name that has been used commonly for the remaining species in other parts of the distributional range of the genus (recent examples: + +Franjevic +et al. +, 2015 + +and + +Tsiamis +et al. +, 2015 + +for Mediterranean individuals; +Villanueva & Sánchez, 1993 +for the South Atlantic; and + +Guerra +et al. +, 2010 + +for the South Pacific), these species are far less studied, and consequently, the name is less commonly applied to them. Therefore, either considering the name + +O. bartramii + +invalid or designating a +neotype +from a location outside of the North Pacific would generate further taxonomic instability and create problems in tracking the current biological information on the species, instead of solving the taxonomy of the genus. + + + +In +order to fix a suitable type locality for the species and ensure the stability of the name, the specimen NSMT-Mo 67507 from the +National Museum of Nature +and +Science +( +Tokyo +) is + +hereby designed as a +neotype + +. +The +neotype +locality is north-east Pacific, +41.95°N +, +135.17°W + +. + + + + \ No newline at end of file diff --git a/data/AB/30/2C/AB302C7FFF9FC85C4A7DFF6DFD60B55F.xml b/data/AB/30/2C/AB302C7FFF9FC85C4A7DFF6DFD60B55F.xml new file mode 100644 index 00000000000..cf534bec60b --- /dev/null +++ b/data/AB/30/2C/AB302C7FFF9FC85C4A7DFF6DFD60B55F.xml @@ -0,0 +1,265 @@ + + + +Global biodiversity of the genus Ommastrephes (Ommastrephidae: Cephalopoda): an allopatric cryptic species complex + + + +Author + +Fernández-Álvarez, Fernando Á. + + + +Author + +Braid, Heather E. + + + +Author + +Nigmatullin, Chingis M. + + + +Author + +Bolstad, Kathrin S. R. + + + +Author + +Haimovici, Manuel + + + +Author + +Sánchez, Pilar + + + +Author + +Sajikumar, Kurichithara K. + + + +Author + +Ragesh, Nadakkal + + + +Author + +Villanueva, Roger + +text + + +Zoological Journal of the Linnean Society + + +2020 + +190 + + +460 +482 + + + +journal article +0024-4082 +9C6D660-9970-4ED0-943E-067F183867B9 + + + + + + + + +Loligo vitreus +Rang, 1837: 71 + + +, pl. 96. + + + + + + + + +Type +material: + +MNHN +type +; specimen not extant [ +fide + +Lu +et al. +(1995: 327) + +] + +. + + + +Type +locality: + +Equatorial coast of Africa (Equatorial Atlantic). + + +Diagnosis + + + +Ommastrephes + +with a maximal mantle length of +900 mm +and weight of +25 kg +; maximal spermatophore length +21–41 mm +(9.5 ± 1.45% +DML +), cement body of spermatophore 11%, sperm reservoir 44.7% and posterior empty end 22% of spermatophore length. Cytochrome +c +oxidase I diagnostic characters: 30, G; 103, G; 306, A; 493, +T +; 16S rRNA diagnostic character: 435, G. + + + +Name of the species in the phylogenetic analyses: +Ommastrephes + +group 2. + + +Distribution: +Tropical and South Atlantic (from 14 to ~ +50°S +) and tropical and south Indian (~10– +35°S +) waters. A significant part of the distributional range for this species was confirmed with +COI +( +Fig. 3 +), but specimens were not available for genetic analysis from the eastern part of the Indian Ocean or from the southernmost part of the Atlantic Ocean. The absence of differences in substrate- and inhibitor-specific cholinesterase activities of optical ganglia between specimens sampled in the South Atlantic and south-eastern Indian waters reported by + +Shevtsova +et al. +(1979) + +and +Rozengart & Basova (2005) +supports the conspecificity of all + +Ommastrephes + +specimens within the distributional range depicted for + +O. cylindraceus + +( +Fig. 3 +). It is also noteworthy that +Dunning (1998) +described a discontinuous distributional range of + +Ommastrephes +spp. + +at the tip of South America and the south-eastern tip of +Australia +and considered both populations reproductively isolated. The results provided here ( +Figs 1–3 +; +Tables 2 +–5) support this point of view and ensure the recognition of + +O. cylindraceus + +and + +O. brevimanus + +as different species. + + +The single specimen of this species analysed from Cape Verdean waters ( +18°N +) merits further discussion. + +Zuev +et al. +(1976) + +sampled Equatorial Atlantic waters extensively without finding any + +Ommastrephes + +individuals. Therefore, it is commonly accepted that the genus + +Ommastrephes + +is not present in Equatorial Atlantic owing to the temperature (see + +Roper +et al. +, 2010 + +). However, sequences obtained herein reveal that the +Cape Verde +individual belongs to + +O. cylindraceus + +( +Figs 1–3 +; +Tables 2 +–5). This isolated spot from the remaining distributional range of the species can be explained by drift of specimens from the Southern Hemisphere, along with the subsurface and intermediate waters of southern origin with the South Atlantic central water ( +100–500 m +, 5–18 °C) and the Antarctic intermediate water ( +500–1200 m +, 2–6 °C), which penetrate from the southern subtropical zone to the north-western coast of Africa up to 20–24 and 28– +34°N +, respectively ( + +Arístegui +et al. +, 2009 + +; +Machini & Pelegri, 2009 +). Similar cases of distant migrations far outside the main distributional range of the species to the other hemisphere with deep waters are also known ( + +Mǿller +et al. +, 2003 + +; + +Arkhipkin +et al. +, 2010 + +). + + + + \ No newline at end of file diff --git a/data/F6/40/87/F64087B8FFDCFFD9A83569D8D966FC33.xml b/data/F6/40/87/F64087B8FFDCFFD9A83569D8D966FC33.xml new file mode 100644 index 00000000000..f737ea62400 --- /dev/null +++ b/data/F6/40/87/F64087B8FFDCFFD9A83569D8D966FC33.xml @@ -0,0 +1,297 @@ + + + +Beyond Wallace: a new lineage of Chrysorthenches (Lepidoptera: Yponomeutoidea: Glyphipterigidae) reveals a journey tracking its host-plants, Podocarpus (Pinopsida: Podocarpaceae) + + + +Author + +Sohn, Jae-Cheon + + + +Author + +Kobayashi, Shigeki + + + +Author + +Yoshiyasu, Yutaka + +text + + +Zoological Journal of the Linnean Society + + +2020 + +190 + + +709 +736 + + + +journal article +0024-4082 +1447E36-C0FD-479F-BB76-29E56E762A61 + + + + + + + +CHRYSORTHENCHES +SMARAGDINA + + +SOHN + + +, + + +SP +. +NOV +. + + + + + + + +( + +FIGS +1D + +, +2C, F, H +) + + +lsid: + +urn:lsid:zoobank.org:act: +F6F3149C-CEC9-4378- 8A65-D43429E2E7F8 + + + +Diagnosis: +This new species is similar to + +C. callibrya + +in the male genitalia, but differs from the latter in having the subrectangular valva (obovate in + +C. callibrya + +) and the subtriangular apex of the saccus (digitate in + +C. callibrya + +). + + +Description: +Adult ( +Fig. 1D +). Head – Vertex yellowish green, with greenish orange piliform scales on temporal and occipital areas; frons yellowish green. Antenna with scape yellowish green; flagellum pale greyish green, intermixed with dark brown scales basally and distally. Maxillary palpus with first palpomere dark brown; second and third palpomeres dark brown, tinged with pale greenish grey apically. Labial palpus with first palpomere yellowish green on outer surface, pale orange on inner surface, tinged with dark brown dorsally; second palpomere 2× longer than first palpomere, dark brown, mottled with yellowish green on outer surface, pale orange on apex and inner surface; third palpomere 2.2× longer than second palpomere, dark brown on outer surface, pale orange on inner surface. + + + +Figure 12. +Habitat and feeding habit of + +Chrysorthenches muraseae + +on + +Podocarpus macrophyllus + +. A–H, Oku-KochiSanso, Imai, Soni, Nara Prefecture. I, Osaka Prefecture University, Sakai, Osaka Prefecture. A, spun leaves of + +Podocarpus macrophyllus + +, arrows indicating holes to eject frass. B, habitat and host-plant trees (arrows). C, D, fresh shoots and spun leaves (arrows). E–H, developing stages of spun leaves (arrows). I, Old spun leaves. + + + + +Figure 13. +Spun leaves and larvae of + +Chrysorthenches muraseae + +on + +Podocarpus macrophyllus + +. A–C, F, H, spun leaves with larval frass. D, E, mature larva. F–I, spun leaves with final instar larva. G, I, inside of spun leaves with final instar larva. J, final instar larva on the cocoon. + + + + +Figure 14. +Cocoons, pupae, and resting adults of + +Chrysorthenches muraseae + +. A, pupal cocoon on leaf surface of + +Podocarpus macrophyllus + +. B, cocoon with pupal exuvia. C, pupa, ventrolateral view. D, pupa, dorsal view. E, cremaster on A10, ventrolateral view. F–H, resting posture of adult (F, H, lateral view; G, dorsal view). I, close-up of adult head, lateral view. + + + +Thorax – Patagium dark yellowish green, tinged with dark brownish green medially; tegula dark purplish brown; mesonotum dark greenish grey, intermixed with dark brown scales anterolaterally; mesoscutellum dark brown. Foreleg with coxa dark greyish brown; femur dark brown; tibia and tarsomeres dark brown, with pale orange ring distally. Midleg with coxa and femur pale orange, intermixed with dark greyish brown scales; tibia and tarsomeres dark brown dorsally, pale orange ventrally, with pale orange ring distally. Hindleg with coxa and femur pale greyish orange, sparsely intermixed with brownish grey scales; tibia and tarsomeres dark brownish grey, with pale orange ring distally. Forewing length +5.2 mm +(sample number = 1), dark brown, tinged with yellowish green narrowly along costal area and broadly along dorsal area; apical area dark greenish brown; costal strigulae dark brown, irregularly intermixed with small white bars; subbasal and median fascia bar-like, yellowish green, bordered with pale greyish green, and then with black; dorsal margin with dark brown strigulae; fringe pale greyish green. Hindwing greyish brown, paler to base; fringe brownish grey. + + +Male genitalia ( +Fig. 2C, F, H +) – Uncus slightly concave apically, gradually broadened basally; setose area of tuba analis one-quarter of its length. Valva subrectangular; costa nearly straight in basal two-thirds, slightly curved in distal third; sacculus narrow, one-third as long as ventral margin of valva; membranous disc obliquely round, half as long as valva. Vinculum U-shaped; saccus as long as uncus, slightly narrowed at middle, narrowly round apically. Anellus densely spinose ( +Fig. 2H +). Phallus ( +Fig. 2F +) with broad, needle-like cornutus one-sixth the length of the phallus; spinulate, digitate cornutus twosevenths as long as the needle-like cornutus; elongate, spinose cornutal zone. + + +Type: +Holotype +– ‘ +HOLO- +| TYPE’ (round label with red edges), ‘ +HOLOTYPE +| + +Chrysorthenches + +| + +smaragdina + +| Sohn’ (red label with black marginal lines), ‘N. +THAILAND +: +1640–1685 m +| +Nan +, Doi Phu Kha NP, | km 33.8 to 34.4, | +26–30.xii.1991 +’, ‘B. M. +♂ +| Genitalia slide | No. 32892’, deposited in NHMUK. + + +Distribution: +Thailand +. + + +Etymology: +The epithet is derived from the Greek σμαράγδι, ‘ +smarágdi +’, emerald, referring to the broad green patch on the forewing of this new species. + + +PHYLOGENETICS + + +Our cladistic analyses of the morphological characteristics of 13 yponomeutoids resulted in a single most parsimonious tree ( +Fig. 15A +: tree length = 74, Ci = 67, Ri = 68). The resulting tree recovers strong support ( +Fig. 16 +: JK support = 100, Bremer support = 5) for the monophyly of + +Chrysorthenches + +against the outgroup, + +Orthenches chlorocoma + +. The backbone of the tree is divided into two clades. One clade corresponds to the + +C. callibrya + +species-group (including + +C. callibrya + +and + +C. muraseae + +) and is recovered as monophyletic ( +Fig. 16 +: JK support = 95, Bremer support = 4). The monophyly of the + +C. callibrya + +species-group is defined by one unambiguous character ( +Fig. 15A +). The other clade is divided into two subclades, but the supports are weak. + + +BIOGEOGRAPHY + + +Optimal reconstruction of our DIVA analysis requires two dispersals ( +Fig. 15B +). The result shows three possible scenarios for the ancestral distribution of + +Chrysorthenches + +: all areas covering (1) +New Zealand +– +Tasmania +–eastern +Australia +– +East Asia +, (2) +New Zealand +–eastern +Australia +– +East Asia +or (3) +Tasmania +–eastern +Australia +– +East Asia +. The + +Chrysorthenches callibrya + +species-group branched off from the ancestors and dispersed to +East Asia +. Subsequently, the + +C. porphyritis + +species-group diverged and occupied +New Zealand +and Tasmania. The + +Chrysorthenches argentea + +species-group radiated within +New Zealand +. + + + + \ No newline at end of file