From 7a29ae43bb30f70ec54f33fd0c2e4fa1918ca75f Mon Sep 17 00:00:00 2001 From: ggserver Date: Tue, 24 Dec 2024 12:08:10 +0000 Subject: [PATCH] Add updates up until 2024-12-24 12:01:38 --- .../87/24768796CD07FFC2FDE015FDFB90FC93.xml | 139 +++--- .../87/24768796CD15FFC8FDFB1246FB73FB43.xml | 109 ++--- .../87/24768796CD16FFF3FDEA13A8FD60FBC3.xml | 126 +++--- .../87/24768796CD18FFCBFDF716FEFD45FAD9.xml | 103 +++-- .../87/24768796CD1FFFC6FDED1609FD27FE12.xml | 110 +++-- .../87/24768796CD2DFFF6FD8F1329FEF9F84A.xml | 425 ++++++++++++------ 6 files changed, 580 insertions(+), 432 deletions(-) diff --git a/data/24/76/87/24768796CD07FFC2FDE015FDFB90FC93.xml b/data/24/76/87/24768796CD07FFC2FDE015FDFB90FC93.xml index 953f88dc0ec..303cdbc24d5 100644 --- a/data/24/76/87/24768796CD07FFC2FDE015FDFB90FC93.xml +++ b/data/24/76/87/24768796CD07FFC2FDE015FDFB90FC93.xml @@ -1,44 +1,46 @@ - - - -Genus Profundiconus Kuroda, 1956 (Gastropoda, Conoidea): Morphological and molecular studies, with the description of five new species from the Solomon Islands and New Caledonia + + + +Genus Profundiconus Kuroda, 1956 (Gastropoda, Conoidea): Morphological and molecular studies, with the description of five new species from the Solomon Islands and New Caledonia - - -Author + + +Author -Tenorio, Manuel J. +Tenorio, Manuel J. - - -Author + + +Author -Castelin, Magalie +Castelin, Magalie -text - - -European Journal of Taxonomy +text + + +European Journal of Taxonomy - -2016 - -173 + +2016 + +2016-01-29 - -1 -45 + +173 + + +1 +45 -journal article -30689 -10.5852/ejt.2016.173 -4ef654c0-9c9e-46c4-9e1a-ac58220a14ff -1182495 -8AA5610F-B490-419D-BBF4-A6D51708350F +journal article +30689 +10.5852/ejt.2016.173 +4ef654c0-9c9e-46c4-9e1a-ac58220a14ff +1182495 - + @@ -60,22 +62,18 @@ da ( type species: - + Asprella - ( - Endemoconus - ?) - teramachii Kuroda, 1956 ). - + @@ -85,12 +83,9 @@ species - + Chelyconus - -(?) - -( +(?) ( Profundiconus ) profundorum @@ -107,30 +102,30 @@ species SHELL CHARACTERS ( -Fig. 1 +Fig. 1 ). Conical to narrowly conical shell, usually thin, very small to very large in size; shoulders become rounded in outer whorls, although a ridge is present in some cases; a few cords present on early whorls and become numerous and smaller in outer whorls; nodules obsolete early; anal notch shallow; larval shell either paucispiral or multispiral; operculum large and serrate; periostracum smooth. RADULAR TOOTH ( -Fig. 2 +Fig. 2 ). Blade and barb present (may be poorly differentiated); blade pointed, moderate in length, up to half length of anterior section of tooth; serrations absent; adapical opening large; a structure that we will refer to as external cusp (non-homologue of a posterior blade) starting at base of adapical opening and extending towards waist; external cusp often laterally expanded and serrated, with several small denticles ( -Fig. 2C, F +Fig. 2C, F ); external cusp may appear partially covered by rolled sheet, which conforms to anterior portion of tooth; barb, blade and external cusp arranged in three different planes, which form angle of c. 120º between them; waist evident; characteristic fringe composed of closely spaced projections pointing towards apex present immediately below waist ( -Fig. 2C, F +Fig. 2C, F ); anterior section of tooth shorter than posterior section; shaft fold present; slanted base with large basal spur. INTERNAL ANATOMY ( -Figs 4–5 +Figs 4–5 ). The internal anatomy of Profundiconus tuberculosus (Tomlin, 1937) ( -Fig. 1G +Fig. 1G ) has been studied in detail by Taki ( @@ -147,7 +142,7 @@ Röckel ( Profundiconus -are presented in Rolán & Raybaudi- Massilia ( +are presented in Rolán & Raybaudi-Massilia ( 1994 ). We hereby reproduce some of the figures from @@ -156,7 +151,7 @@ Taki ( ) ( -Figs 4–5 +Figs 4–5 ) to illustrate the details of the internal anatomy in Profundiconus @@ -174,20 +169,20 @@ remarked that the anatomical features of P. tuberculosus indicate in many aspects the ancestral nature of this species. The proboscis sheath ( -Fig. 3A +Fig. 3A : RS) has longitudinal folds on the inner side; the inner wall of the respiratory siphon ( -Fig. 3A–B +Fig. 3A–B : SI) is smooth, lacking the furrows or invaginations that have been reported in other species of cone snails; the osphradium ( -Fig. 3B +Fig. 3B : OS) is simple and not divided, with the small lobules arranged like feather banners on both sides of the longitudinal axis; there is only one salivary gland ( -Fig. 3B +Fig. 3B : SD), consisting of a multitude of small lobules. The anterior lobe of the midgut gland ( -Fig. 4A +Fig. 4A : L1, L2) has a bifurcated excretory duct. The male genitalia ( -Fig. 4B +Fig. 4B ) have been described in detail. The organs that Bergh ( @@ -201,13 +196,13 @@ Taki ( ) . The testis consists of two lobes ( -Fig. 4B +Fig. 4B : HA, HP), which are spirally coiled and reach the tip of the spire. The prostate ( -Fig. 4B +Fig. 4B : PG) is separated into three parts (PGA, PGD, PGS), with irregular shallow grooves on its surface. Both cerebral ganglia ( -Fig. 4C +Fig. 4C : C) largely merge with each other and can be distinguished only by a slight constriction in the middle; the right parietal and right visceral nerves ( -Fig. 4C +Fig. 4C : PA, V) go together as a single nerve from the subintestinal (IN) ganglion. They separate only after a prolonged course. @@ -231,7 +226,7 @@ The Holocene species included in the genus ( Profundiconus emersoni ( -Fig. 1F +Fig. 1F ), which occurs in the East Pacific region. Extinct species are known from the Indo-Pacific region and North America ( Tucker & Tenorio @@ -250,7 +245,7 @@ Tucker & Tenorio ( . - + Fig. 2. — A–C . Radular teeth extracted from @@ -280,7 +275,7 @@ Tucker & Tenorio ( . Enlargement of the middle section of E. - + Fig. 3. @@ -294,7 +289,7 @@ Tucker & Tenorio ( . Internal anatomy. F = foot; FR = rostrum frontal lobe; GD = venom bulb; GG = venom duct; HZ = heart; K = gill; LB = middle gut; M = mouth; MG = stomach; MT = mantle; MTR = mantle edge; NR = kidney; OD = oviduct; OE = oesophagus; OP = operculum; OS = osphradium; P = penis; PG = prostate; R = rostrum; RDS = radular sac; RT = rectum; SB = receptaculum seminis; SCD = mucous gland; SD = salivary gland; SI = siphon; T = tentacles. - + Fig. 4. @@ -770,13 +765,13 @@ have suggested that (Bruguière, 1792) ( -Fig. 1E +Fig. 1E ) and P. teramachii ( -Fig. 1B +Fig. 1B ) are close relatives. Based upon similarities in shell morphology Tucker & Tenorio (2009) placed both genera, @@ -796,7 +791,7 @@ and separate from Profundiconus . The presence on the radular tooth of a laterally widened, often serrated external cusp, along with a characteristic fringe located immediately below the waist composed of closely spaced projections pointing towards the apex in addition to other morphological features (i.e., barb, pointed blade, shaft fold, etc.; see -Fig. 2 +Fig. 2 ), allow the immediate identification of an individual as a member of Profundiconus @@ -880,7 +875,7 @@ reported finding the beaks of a small cephalopod in the stomach of an adult spec Ingroup sequences included 657 bp containing 192 variable sites, of which 127 were phylogenetically informative. Excluding redundant sequences, 27 sequences were unique in the ingroup. The ML and BA tree topologies were congruent ( -Fig. 5 +Fig. 5 ) and supported Profundiconus @@ -890,7 +885,7 @@ as a monophyletic group (PP = 1; BP = 87%). Within Profundiconus , several clades corresponding to different species were recovered, although their phylogenetic relationships were poorly resolved ( -Fig. 5 +Fig. 5 ). The individuals belonging to P. teramachii @@ -949,9 +944,9 @@ and P. teramachii , the morphological differences in their shells ( -Fig. 1B–C +Fig. 1B–C ) and radulae ( -Fig. 6 +Fig. 6 ) are slight. @@ -985,7 +980,7 @@ in GenBank , which represents the haplotype for 18 specimens ( -Table 1 +Table 1 ). As the voucher specimen (MNHN IM-2009-18244) seems to be properly identified, this could be due to contamination. However, there also exists the possibility that the cox1 can simply not separate these two species, which on the other hand can be easily separated based on shell and radular morphologies. There are many examples in the literature of morphologically distinct species having identical or almost identical @@ -1088,7 +1083,7 @@ Puillandre ). - + Fig. 5. Likelihood phylogenetic tree of diff --git a/data/24/76/87/24768796CD15FFC8FDFB1246FB73FB43.xml b/data/24/76/87/24768796CD15FFC8FDFB1246FB73FB43.xml index 70533c74f0f..55c29906317 100644 --- a/data/24/76/87/24768796CD15FFC8FDFB1246FB73FB43.xml +++ b/data/24/76/87/24768796CD15FFC8FDFB1246FB73FB43.xml @@ -1,43 +1,46 @@ - - - -Genus Profundiconus Kuroda, 1956 (Gastropoda, Conoidea): Morphological and molecular studies, with the description of five new species from the Solomon Islands and New Caledonia + + + +Genus Profundiconus Kuroda, 1956 (Gastropoda, Conoidea): Morphological and molecular studies, with the description of five new species from the Solomon Islands and New Caledonia - - -Author + + +Author -Tenorio, Manuel J. +Tenorio, Manuel J. - - -Author + + +Author -Castelin, Magalie +Castelin, Magalie -text - - -European Journal of Taxonomy +text + + +European Journal of Taxonomy - -2016 - -173 + +2016 + +2016-01-29 - -1 -45 + +173 + + +1 +45 -journal article -30689 -10.5852/ejt.2016.173 -4ef654c0-9c9e-46c4-9e1a-ac58220a14ff -1182495 +journal article +30689 +10.5852/ejt.2016.173 +4ef654c0-9c9e-46c4-9e1a-ac58220a14ff +1182495 - + @@ -51,9 +54,9 @@ urn:lsid:zoobank.org:act:3D0659AE-4433-41C4-B03A-BFED9523E1EE -Figs 10 +Figs 10 , -11A–G, K +11A–G, K @@ -76,7 +79,7 @@ Puillandre -At the request of Prof. Philippe Bouchet from MNHN, this new species is named after Captain Jean- François Barazer, first captain on IRD’s research vessel +At the request of Prof. Philippe Bouchet from MNHN, this new species is named after Captain Jean-François Barazer, first captain on IRD’s research vessel Alis , in recognition of his dedication to, and expertise in, deep-sea exploration in the South and West Pacific. Many new species have been discovered during the cruises that he has skilfully commanded. @@ -111,7 +114,7 @@ R/V MNHN IM-2007-30760 ; -Fig. 11A +Fig. 11A ; GenBank accession number ( cox1 sequence): @@ -123,7 +126,7 @@ sequence): Paratypes - + NEW CALEDONIA : 14.5 × 8.6 mm @@ -133,14 +136,14 @@ sequence): ; paratype 1; -Fig. 11B +Fig. 11B ; GenBank accession number ( cox1 sequence): KJ550112 ); - + 16.5 × 9.9 mm , @@ -163,13 +166,13 @@ R/V ; paratype 2; - + Fig. 11 C ); - + 10.3 × 6.2 mm , @@ -194,28 +197,28 @@ R/V ; paratype 3; - + Fig. 11 D ); - + 10.6 × 5.5 mm , collecting data as for preceding ( MNHN -IM- 2000-30792 +IM-2000-30792 ; paratype 4; - + Fig. 11 E ); - + 10.5 × 5.6 mm , @@ -240,7 +243,7 @@ R/V ; paratype 5; - + Fig. 11 G @@ -284,7 +287,7 @@ Morphometric parameters: S L = Shell very small (maximum length 16.5 mm ). Shell profile conical, with spire low to moderate in height. Spire profile straight. Shoulder angulated, with distinct rim. Last whorl with straight sides, smooth, with some grooves in basal quarter, which appears slightly deflected to the left. Protoconch white, porcellaneous, with 1.5 whorls ( -Fig. 11F +Fig. 11F ). Early teleoconch whorls with small nodules which are lost after whorl 3. Sutural ramp flat to slightly concave, slightly stepped, bearing 3–5 strong cords, with smooth ridge above suture. Spire white, with yellow-brown blotches on ridge above suture. Ground colour pale orange-brown to creamy white. Last whorl with pattern of pure white dashes and dots arranged in spiral lines, often alternating with dashes of orange-brown. Sparse small, diffuse rounded, orange-brown spots occasionally present. Holotype just below midbody with orange-brown narrow band overlaid with white dashes arranged in spiral, absent in other specimens examined, some of which are patternless. Columella and aperture white. @@ -293,13 +296,13 @@ just below midbody with orange-brown narrow band overlaid with white dashes arra Radular tooth examined in holotype ( -Fig. 11K +Fig. 11K ) and paratype 1. 45 teeth in radular sac. Radular tooth of rather large relative size: its total length relative to shell length S L/T L = 26–30. Anterior portion much shorter than posterior section of tooth (T L/AP L = 3.7–3.8). With one barb and pointed, well-defined blade, which covers 48–61% of apical portion of tooth. External cusp present, extending between 80 and 96% of length of anterior portion of tooth. External cusp laterally widened and serrated, with 7–9 small denticles. Large adapical opening occupying most of anterior portion of tooth (100AO L/AP L = 64–70). With characteristic fringe of closely spaced projections pointing towards the apex located immediately below waist. Shaft fold present. Large and prominent basal spur on top of slanted base of tooth. - + Fig.11. [oppositepage]— @@ -376,7 +379,7 @@ are known: from NW Bellona Reef, Plateau des Chesterfield ( locality), and from the Grand Passage area; at depths from 277 to 350 m ( -Fig. 10 +Fig. 10 ). @@ -396,7 +399,7 @@ resembles in general aspect a small specimen of Boucheticonus alisi ( -Fig. 11H +Fig. 11H ). The latter has a larger shell, variably patterned, with a multispiral protoconch, which exhibits a characteristic brown blotch. The protoconch is paucispiral in P. barazeri @@ -414,7 +417,7 @@ These two species are phylogenetically distant ( B. alisi ( -Fig. 11L +Fig. 11L ) is very large and elongated, with an extremely long anterior section that is more than four times longer than the posterior section of the tooth. It has a small and indistinct barb opposite a blade, which is enlarged and widened laterally. P. barazeri @@ -425,7 +428,7 @@ shows some similarities to P. zardoyai ( - + Fig. 11I @@ -437,7 +440,7 @@ Fig. ) ( -Fig. 11J +Fig. 11J ). The scarce specimens available of the latter species come from the Chesterfield Reef area. C. estivali @@ -475,7 +478,7 @@ lacks the large, globose protoconch of about 2 whorls, which constitutes one of sp. nov. ( -Fig. 11K +Fig. 11K ) has a larger relative size (S L/T L = 26–30 versus 33–40 for zardoyai diff --git a/data/24/76/87/24768796CD16FFF3FDEA13A8FD60FBC3.xml b/data/24/76/87/24768796CD16FFF3FDEA13A8FD60FBC3.xml index ace2010ce56..60a98bb7d2e 100644 --- a/data/24/76/87/24768796CD16FFF3FDEA13A8FD60FBC3.xml +++ b/data/24/76/87/24768796CD16FFF3FDEA13A8FD60FBC3.xml @@ -1,43 +1,46 @@ - - - -Genus Profundiconus Kuroda, 1956 (Gastropoda, Conoidea): Morphological and molecular studies, with the description of five new species from the Solomon Islands and New Caledonia + + + +Genus Profundiconus Kuroda, 1956 (Gastropoda, Conoidea): Morphological and molecular studies, with the description of five new species from the Solomon Islands and New Caledonia - - -Author + + +Author -Tenorio, Manuel J. +Tenorio, Manuel J. - - -Author + + +Author -Castelin, Magalie +Castelin, Magalie -text - - -European Journal of Taxonomy +text + + +European Journal of Taxonomy - -2016 - -173 + +2016 + +2016-01-29 - -1 -45 + +173 + + +1 +45 -journal article -30689 -10.5852/ejt.2016.173 -4ef654c0-9c9e-46c4-9e1a-ac58220a14ff -1182495 +journal article +30689 +10.5852/ejt.2016.173 +4ef654c0-9c9e-46c4-9e1a-ac58220a14ff +1182495 - + @@ -51,11 +54,11 @@ urn:lsid:zoobank.org:act:55807BF8-D984-42C1-B039-F3EBD8EB2C13 -Figs 12A–J +Figs 12A–J , -13A–D +13A–D , -14 +14 @@ -86,10 +89,11 @@ Bartsch & Rehder, 1943 ). - + Conus +sp. C -sp. C – +– Röckel et al. @@ -98,11 +102,11 @@ Röckel : 585, fig. 49. - + Profundiconus +n. sp. g -n. sp. -g. – +. – Puillandre et al. @@ -135,7 +139,7 @@ at the molecular level. Holotype - + NEW CALEDONIA : 43.2 × 18.0 mm, @@ -155,7 +159,7 @@ R/V MNHN IM-2000-30771 ; - + Fig. 12 A @@ -193,7 +197,7 @@ m ; paratype 1; -Fig. 12B +Fig. 12B ); @@ -221,7 +225,7 @@ m ; paratype 2; - + Fig. 12 C @@ -251,7 +255,7 @@ Fig. 12 ; paratype 3; -Fig. 12D +Fig. 12D ) ; @@ -278,7 +282,7 @@ Fig. 12 ; paratype 4; -Fig. 12E, H +Fig. 12E, H ) ; @@ -305,7 +309,7 @@ Fig. 12 ; paratype 5; - + Fig. 12F @@ -333,7 +337,7 @@ Fig. ; paratype 6; -Fig. 12G +Fig. 12G ; GenBank accession number ( cox1 sequence): @@ -364,7 +368,7 @@ sequence): ; paratype 7; - + Fig. 12I @@ -467,7 +471,7 @@ sequence): 99587; paratype 8; -Fig. 12J +Fig. 12J ); 44.9 × 19.5 mm , R/V @@ -565,7 +569,7 @@ Morphometric parameters: S L = ; RD = 0.53–0.62; RSH = 0.22–0.29; PMD = 0.81–0.90. Shell moderately small to medium sized (maximum length 57.0 mm). Shell profile ventricosely conical, with high spire. Spire profile sigmoid to slightly concave. Protoconch multispiral, with 3–3.5 whorls, white to yellow-brown. Last whorl of larval shell shows minute axial ridges. Early teleoconch whorls with nodules which are often indistinct after whorls 5 to 6, but may persist, forming nodulose ridge reaching shoulder on last whorl. Sutural ramp flat to slightly concave, with very fine striae and arcuate threads becoming obsolete in late whorls. Shoulder with distinct ridge, usually smooth, although nodulose or even strongly nodulose in some specimens. Last whorl with convex sides adapically, then almost straight and slightly concave abapically. Last whorl smooth or with very fine striae becoming more evident towards base. Spire and last whorl patternless, white to pale straw-yellow in colour. Columella white. Aperture pale yellow or white. Periostracum yellow, thin and translucent. Operculum with serrations. - + Fig. 12. @@ -598,11 +602,11 @@ Morphometric parameters: S L = Radular tooth examined in holotype ( -Fig. 13A +Fig. 13A ), in paratypes 3 ( -Fig. 13B–D +Fig. 13B–D ), 6 and 9, and in an additional non-type specimen. 48 to 62 teeth in radular sac. Radular tooth small for size of shell: its total length relative to shell length S L /T L = 75–105. Anterior portion shorter than posterior section of tooth (T L/AP L = 3.1–3.6). With one barb and pointed blade which covers 50–62% of anterior portion of tooth. External cusp present, extending between 64 and 90% of length of anterior portion of tooth. External cusp laterally widened and serrated, with 4–5 small denticles. Large adapical opening occupying most of anterior portion of tooth (100AO L/AP L = 64–75). Fringe of closely spaced projections pointing towards apex immediately below waist. Shaft fold present. Large and prominent basal spur on top of slanted base of tooth. @@ -619,7 +623,7 @@ Radular tooth examined in (Kermadec Ridge), at depths from 380 to 1100 m ( -Fig. 14 +Fig. 14 ). Several empty shells matching P. puillandrei @@ -649,7 +653,7 @@ This is a feasible possibility given the multispiral protoconch of this species . - + Fig. 13. Radular teeth extracted from @@ -660,7 +664,7 @@ Radular teeth extracted from A . Optical photomicrograph (holotype, MNHN IM-2000-30771, S L 43.2 mm). B -. SEM photomicrograph (paratype 3, MNHN IM- 2000-30774, S L 35.0 mm). +. SEM photomicrograph (paratype 3, MNHN IM-2000-30774, S L 35.0 mm). C . Enlargement of the external cusp. D @@ -732,7 +736,7 @@ is patternless. The radular teeth of sp. nov. ( -Fig. 13 +Fig. 13 ) are superficially similar, but the tooth of P. vaubani @@ -779,7 +783,7 @@ The new species can also be compared with 76.09 mm (t = -10.20, p = 5.25 × 10-10; U = 0, p = 2.5 × 10-5). - + Fig. 14. Distribution map for @@ -827,13 +831,13 @@ exhibit a characteristic pattern of broad, pale brown spiral bands on each side sp. nov. ( -Fig. 13 +Fig. 13 ) and of P. smirnoides ( -Fig. 9H +Fig. 9H ) is very different. The radular tooth of P. profundorum @@ -851,11 +855,11 @@ Most of the shells of sp. nov. examined were not nodulose at the shoulder ridge ( -Fig. 12 +Fig. 12 ). About 10% of the specimens studied had a nodulose spire and shoulder ridge (i.e., paratype 6, -Fig. 12G +Fig. 12G ), coming mainly from Loyalty Ridge. These include two of the sequenced individuals, which, however, were genetically similar to the ones with a smooth ridge. Moreover, nodulose and non-nodulose specimens exhibit analogous radular and protoconch morphology. The presence of nodules at the spire and shoulder causes an apparent difference in shape, which is possibly the main source of intraspecific phenotypic variability within this species. Nodulose specimens may resemble a small P. teramachii @@ -863,7 +867,7 @@ examined were not nodulose at the shoulder ridge ( (e.g., paratype 6, -Fig. 12G +Fig. 12G ), a distinct but related species as inferred from the tree in Fig. 5 . The shell of @@ -887,7 +891,7 @@ The radular tooth of sp. nov. ( -Fig. 13 +Fig. 13 ). However, P. teramachii diff --git a/data/24/76/87/24768796CD18FFCBFDF716FEFD45FAD9.xml b/data/24/76/87/24768796CD18FFCBFDF716FEFD45FAD9.xml index cb770358d69..35a6ae32bcf 100644 --- a/data/24/76/87/24768796CD18FFCBFDF716FEFD45FAD9.xml +++ b/data/24/76/87/24768796CD18FFCBFDF716FEFD45FAD9.xml @@ -1,43 +1,46 @@ - - - -Genus Profundiconus Kuroda, 1956 (Gastropoda, Conoidea): Morphological and molecular studies, with the description of five new species from the Solomon Islands and New Caledonia + + + +Genus Profundiconus Kuroda, 1956 (Gastropoda, Conoidea): Morphological and molecular studies, with the description of five new species from the Solomon Islands and New Caledonia - - -Author + + +Author -Tenorio, Manuel J. +Tenorio, Manuel J. - - -Author + + +Author -Castelin, Magalie +Castelin, Magalie -text - - -European Journal of Taxonomy +text + + +European Journal of Taxonomy - -2016 - -173 + +2016 + +2016-01-29 - -1 -45 + +173 + + +1 +45 -journal article -30689 -10.5852/ejt.2016.173 -4ef654c0-9c9e-46c4-9e1a-ac58220a14ff -1182495 +journal article +30689 +10.5852/ejt.2016.173 +4ef654c0-9c9e-46c4-9e1a-ac58220a14ff +1182495 - + @@ -51,25 +54,29 @@ urn:lsid:zoobank.org:act:1785F28A-89FA-40FC-B28A-68E828B3F0A9 -Figs 9A–D, G +Figs 9A–D, G , -10 +10 - - - + + + Profundiconus +n. sp. h -n. sp. -h – +– Puillandre et al. 2014 -: Supplementary Material 1 (unfigured). +: Supplementary Material 1 (unfigured). + + + + Profundiconus cf. @@ -137,7 +144,7 @@ R/V MNHN IM-2007-30854 ; -Fig. 9A +Fig. 9A ; GenBank accession number ( cox1 sequence): @@ -167,7 +174,7 @@ R/V MNHN IM-2007-30858 ; paratype 1; -Fig. 9B +Fig. 9B ; GenBank accession number ( cox1 sequence): @@ -195,7 +202,7 @@ R/V ; paratype 2; -Fig. 9D +Fig. 9D ; fragment of the spire, well preserved). @@ -236,10 +243,10 @@ Morphometric parameters: S L = Shell moderately small to medium sized. Maximum length 42.5 mm . Shell profile ventricosely conical, with spire moderate to high. Spire profile sigmoid. Multispiral protoconch with 3–3.5 whorls, white, glossy and translucent ( -Fig. 9C +Fig. 9C ). Early 4–5 teleoconch whorls stepped, ridged with small nodules which tend to disappear after fifth whorl. Sutural ramp flat to slightly concave, with 3 to 6 fine spiral cords becoming obsolete in late spire whorls. Shoulder subangulate, forming characteristic ridge, covered with axial costae on last whorl. Early teleoconch whorls creamy white with brown spiral band on periphery, extending over row of nodules. On later whorls, this brown band interrupted by white areas. Spire creamy white with sparse, small brown blotches in areas near suture. Last whorl smooth or with very fine striae and with spiral ribs on basal third. Ground colour creamy white overlaid with orange-brown to purplish brown, irregular blotches or axially arranged flammules, interrupted by ground-colour band at midbody. Columella white. Aperture creamy white. Anal notch shallow. Periostracum and operculum not observed. - + Fig. 9. — A–D . @@ -293,7 +300,7 @@ Tenorio, 2015 Radular teeth examined in holotype ( -Fig. 9G +Fig. 9G ) and in paratype 1. 48 to 53 teeth in radular sac. Radular tooth medium to large-sized, its total length relative to shell length S L /T L = 37–45, rather elongated. Waist poorly defined. Anterior portion shorter than posterior section of tooth (T L/AP L = 2.61–2.70). With one barb and pointed, well-defined blade which covers 40–43% of anterior portion of tooth. With external cusp located at approximately lower third of anterior portion of tooth, extending between 60% and 81% of length of anterior portion of tooth. External cusp laterally expanded and serrated, with 5–6 small denticles. With characteristic fringe of closely spaced projections pointing towards apex located immediately below waist. Shaft fold present. Large and prominent basal spur on top of slanted base of tooth. @@ -309,7 +316,7 @@ Radular teeth examined in Only known from the Coral Sea, Plateau des Chesterfield area, New Caledonia ( -Fig. 10 +Fig. 10 ). @@ -353,7 +360,7 @@ and P. smirnoides also differ. The latter has a very elongated radular tooth ( -Fig. 9H +Fig. 9H ), with the anterior and posterior sections difficult to separate ( Tenorio 2015b ). Still, the anterior section of the tooth in adult @@ -371,7 +378,7 @@ Interestingly, in the external cusp occupies a very high position in the anterior section, extending from 20 to 30% of its length (i.e., almost the same position as the blade, but with a different orientation). - + Fig. 10. Distribution map for @@ -431,7 +438,7 @@ cf. cakobaui ( -Fig. 9E +Fig. 9E ) from the Philippines . @@ -477,7 +484,7 @@ at the shoulder ridge. The elusive species ) ( -Fig. 9F +Fig. 9F ), known only from a few specimens collected in the Philippines , has a protoconch and early teleoconch resembling that of diff --git a/data/24/76/87/24768796CD1FFFC6FDED1609FD27FE12.xml b/data/24/76/87/24768796CD1FFFC6FDED1609FD27FE12.xml index 1b1827ba134..510e0bfa3b6 100644 --- a/data/24/76/87/24768796CD1FFFC6FDED1609FD27FE12.xml +++ b/data/24/76/87/24768796CD1FFFC6FDED1609FD27FE12.xml @@ -1,43 +1,46 @@ - - - -Genus Profundiconus Kuroda, 1956 (Gastropoda, Conoidea): Morphological and molecular studies, with the description of five new species from the Solomon Islands and New Caledonia + + + +Genus Profundiconus Kuroda, 1956 (Gastropoda, Conoidea): Morphological and molecular studies, with the description of five new species from the Solomon Islands and New Caledonia - - -Author + + +Author -Tenorio, Manuel J. +Tenorio, Manuel J. - - -Author + + +Author -Castelin, Magalie +Castelin, Magalie -text - - -European Journal of Taxonomy +text + + +European Journal of Taxonomy - -2016 - -173 + +2016 + +2016-01-29 - -1 -45 + +173 + + +1 +45 -journal article -30689 -10.5852/ejt.2016.173 -4ef654c0-9c9e-46c4-9e1a-ac58220a14ff -1182495 +journal article +30689 +10.5852/ejt.2016.173 +4ef654c0-9c9e-46c4-9e1a-ac58220a14ff +1182495 - + @@ -51,9 +54,9 @@ urn:lsid:zoobank.org:act:8CAB54B6-D03A-49B7-A289-3F46FCCA9366 -Figs 7A–G +Figs 7A–G , -8 +8 @@ -115,21 +118,21 @@ R/V MNHN IM-2007-34878 ; -Fig. 7A +Fig. 7A ; GenBank accession number ( cox1 sequence): KJ550452). - - - -Paratypes - + + +Paratypes + + + + SOLOMON ISLANDS -: 30.0 × -12.5 mm -, +: 30.0 × 12.5 mm, R/V Alis @@ -149,7 +152,7 @@ R/V ; paratype 1; -Fig. 7B +Fig. 7B ; GenBank accession number ( cox1 sequence): @@ -158,9 +161,7 @@ sequence): ; -30.4 × -13.1 mm -, +30.4 × 13.1 mm, R/V Alis @@ -180,13 +181,11 @@ R/V ; paratype 2; -Fig. 7C +Fig. 7C ); -27.2 × -12.4 mm -(broken shell), +27.2 × 12.4 mm (broken shell), R/V Alis @@ -202,10 +201,7 @@ R/V ; paratype 3; - -Fig. 7 -E - +Fig. 7E ). @@ -233,7 +229,7 @@ SOLOMON ISLANDS: Guadalcanal, 9°19' S, 160°6' E, MNHN IM-2007-34879 ; -Fig. 7F +Fig. 7F ; GenBank accession number ( cox1 sequence): @@ -258,10 +254,10 @@ Morphometric parameters: S L = Shell moderately small. Maximum length 31.5 mm . Shell profile conical, with straight to very slightly convex sides and spire moderate to high. Spire profile straight, stepped. Paucispiral protoconch with 1.5–1.75 whorls, brownish, glossy and translucent ( -Fig. 7D +Fig. 7D ). Teleoconch whorls stepped, ridged with small but strong nodules which persist in shoulder in most cases. Sutural ramp concave, with subsutural ridge and 3 to 4 strong spiral cords crossed by thin radial threads. Shoulder carinated, most often covered with small nodules along shoulder angle. Early teleoconch whorls pure white. Late teleoconch whorls in vicinity of shoulder area may exhibit some small, irregular brown blotches. Last whorl with grooves forming flat spiral ribbons, which may extend from shoulder to base. In some specimens sculpture of grooves and flat spiral ribbons in last whorl reduced to subshoulder area and basal half. Ground colour white overlaid with sparse brown, axially arranged flammules or blotches. White ground colour predominates in all specimens studied. Columella and aperture white. Anal notch shallow. Periostracum yellow-brown, thin and translucent. Operculum present, serrated on left border. - + Fig. 7. @@ -288,7 +284,7 @@ Shell moderately small. Maximum length Radular teeth examined in paratype 1 ( -Fig. 7G +Fig. 7G ). 38 teeth in radular sac. Radular tooth medium-sized, its total length relative to shell length S L/T L = 45. Anterior portion much shorter than posterior section of tooth (T L/AP L = 3.43). With one barb and pointed, well-defined blade which covers 50% of anterior portion of tooth. With external cusp located at approximately lower quarter of anterior portion of tooth, extending between 75% and 90% of length of anterior portion of tooth. External cusp laterally expanded and serrated, with 5 small denticles. Immediately below waist with characteristic fringe composed of closely spaced projections pointing towards apex. Shaft fold present. Large and prominent basal spur present on top of slanted base of tooth. @@ -310,7 +306,7 @@ and , at depths between 336 and 690 m ( -Fig. 8 +Fig. 8 ). diff --git a/data/24/76/87/24768796CD2DFFF6FD8F1329FEF9F84A.xml b/data/24/76/87/24768796CD2DFFF6FD8F1329FEF9F84A.xml index 06813deffa9..91e45ef3cff 100644 --- a/data/24/76/87/24768796CD2DFFF6FD8F1329FEF9F84A.xml +++ b/data/24/76/87/24768796CD2DFFF6FD8F1329FEF9F84A.xml @@ -1,45 +1,47 @@ - - - -Genus Profundiconus Kuroda, 1956 (Gastropoda, Conoidea): Morphological and molecular studies, with the description of five new species from the Solomon Islands and New Caledonia + + + +Genus Profundiconus Kuroda, 1956 (Gastropoda, Conoidea): Morphological and molecular studies, with the description of five new species from the Solomon Islands and New Caledonia - - -Author + + +Author -Tenorio, Manuel J. +Tenorio, Manuel J. - - -Author + + +Author -Castelin, Magalie +Castelin, Magalie -text - - -European Journal of Taxonomy +text + + +European Journal of Taxonomy - -2016 - -173 + +2016 + +2016-01-29 - -1 -45 + +173 + + +1 +45 -journal article -30689 -10.5852/ejt.2016.173 -4ef654c0-9c9e-46c4-9e1a-ac58220a14ff -1182495 -8AA5610F-B490-419D-BBF4-A6D51708350F +journal article +30689 +10.5852/ejt.2016.173 +4ef654c0-9c9e-46c4-9e1a-ac58220a14ff +1182495 - - + + @@ -48,15 +50,15 @@ sp. nov. -urn:lsid:zoobank.org:act:6581A3CA-DA2E-44A2-8E6E-2600CCA3B1D3 - + +urn:lsid:zoobank.org:act:6581A3CA-DA2E-44A2-8E6E-2600CCA3B1D3 -Figs 15A–J +Figs 15A–J , -16A–C +16A–C , -17 +17 @@ -127,7 +129,7 @@ The epithet of this species makes reference to its distribution in deep water ar . - + Type material examined @@ -137,20 +139,20 @@ The epithet of this species makes reference to its distribution in deep water ar Holotype - + NEW CALEDONIA : 45.9 × 21.7 mm , - + R/V Alis , TERRASSES Expedition, st. DW 3076, Banc Crypthélia, Norfolk Ridge , -23°14'12" S +23°14'12" S , -168°13'18" E +168°13'18" E , 390–570 m @@ -159,7 +161,7 @@ R/V MNHN IM-2009-18227 ; -Fig. 15A +Fig. 15A ; GenBank accession number ( cox1 sequence): @@ -167,8 +169,6 @@ sequence): ). - - Paratypes @@ -184,9 +184,9 @@ R/V , EXBODI Expedition, st. DW 3889, Mont Vauban Partie SE , -22°25' S +22°25' S , -171°41' E +171°41' E , 350 m @@ -196,130 +196,277 @@ R/V ; paratype 1; -Fig. 15B +Fig. 15B ); - + 52.6 × 24.7 mm -, R/V - +, + +R/V Alis +, SMIB 8 Expedition, st. DW 167, Norfolk Ridge +, +23°38' S +, +167°43' E +, + +430–452 m + +( +MNHN +IM-2000-30780 +; +paratype +2; +Fig. 15C +) -, SMIB 8 Expedition, st. DW 167, Norfolk Ridge, 23°38' S, 167°43' E, -430–452 m -(MNHN IM-2000-30780; paratype 2; -Fig. 15C -); 46.7 × +; + +46.7 × 20.4 mm -, R/V +, + +R/V Alis -, TERRASSES Expedition, st. DW 3060, Banc Stylaster, Norfolk Ridge, 23°39' S, 167°44' E, +, TERRASSES Expedition, st. DW 3060, Banc Stylaster, Norfolk Ridge + +, +23°39' S +, +167°44' E +, 440–450 m ( -MNHN +MNHN IM-2009-18225 ; paratype 3; -Fig 15G -; -GenBank -accession number ( +Fig 15G +; GenBank accession number ( cox1 sequence): KJ550427 -); 71.8 × 37.0 mm, R/ - -V +) + +; + +71.8 × 37.0 mm, + +R/V Coriolis - -, CHALCAL 2 -Expedition -, st. DW 82, S +, CHALCAL 2 Expedition, st. DW 82 + +, S New Caledonia , -23°14' S +23°14' S , -168°04' E +168°04' E , -304 m -(MNHN IM-2000-30782; paratype 4; -Fig. 15D -); 92.0 × 42.0 mm, R/V + +304 m + +( +MNHN +IM-2000-30782; +paratype +4; +Fig. 15D +) + +; + +92.0 × 42.0 mm, + +R/V Alis -, NORFOLK 1 Expedition, st. DW 1732, Banc P, Norfolk Ridge, 23°20' S, 168°16' E, -347–1063 m -(MNHN IM-2000-30783; paratype 5; -Fig. 15E -); 65.1 × +, NORFOLK 1 Expedition, st. DW 1732, Banc P, Norfolk Ridge + +, +23°20' S +, +168°16' E +, + +347–1063 m + +( +MNHN +IM-2000-30783 +; +paratype +5; +Fig. 15E +) + +; + +65.1 × 32.5 mm -, R/V +, + +R/V Alis -, MUSORSTOM 6 Expedition, st. DW 406, Loyalty Ridge, 20°41' S, 167°07' E, +, MUSORSTOM 6 Expedition, st. DW 406, Loyalty Ridge + +, +20°41' S +, +167°07' E +, 373 m ( -MNHN +MNHN IM-2000-30784 ; paratype 6; -Fig. 15H -); 54.5 × +Fig. 15H +) + +; + +54.5 × 25.4 mm -, R/ - -V +, + +R/V Coriolis - -, CHALCAL 2 -Expedition -, st. CC1, S +, CHALCAL 2 Expedition, st. CC1 + +, S New Caledonia , 24°55' S , 168°22' E , -500 m -(MNHN IM-2000-30785; paratype 7; - + +500 m + +(MNHN IM-2000-30785; +paratype +7; + Fig. -15I + +15I + -); 67.3 × 33.0 mm, R/V +) + +; + +67.3 × 33.0 mm, + +R/V Alis -, NORFOLK 1 Expedition, st. DW 1657, Banc N, Norfolk Ridge, 23°28' S, 167°52' E, -305–332 m -(MNHN IM-2000-30786; paratype 8; -Fig. 15J -); 61.5 × +, NORFOLK 1 Expedition, st. DW 1657, Banc N, Norfolk Ridge + +, +23°28' S +, +167°52' E +, + +305–332 m + +( +MNHN +IM-2000-30786 +; +paratype +8; +Fig. 15J +) + +; + +61.5 × 28.7 mm -, R/V +, + +R/V Alis -, NORFOLK 1 Expedition, st. DW 1658, Banc N, Norfolk Ridge, 23°26' S, 167°50' E, -320–336 m -(MNHN IM-2000-30787; paratype 9); 65.5 × +, NORFOLK 1 Expedition, st. DW 1658, Banc N, Norfolk Ridge + +, +23°26' S +, +167°50' E +, + +320–336 m + +( +MNHN +IM-2000-30787 +; +paratype +9) + +; + +65.5 × 35.7 mm -, R/V +, + +R/V Alis -, NORFOLK 1 Expedition, st. DW 1652, Banc N, Norfolk Ridge, 23°26' S, 167°50' E, -290– 378 m -(MNHN IM-2000-30788; paratype 10); 53.4 × +, NORFOLK 1 Expedition, st. DW 1652, Banc N, Norfolk Ridge + +, +23°26' S +, +167°50' E +, + +290– 378 m + +( +MNHN +IM-2000-30788 +; +paratype +10) + +; + +53.4 × 22.8 mm -, R/V +, + +R/V Alis -, BATHUS 3 Expedition, st. CP 811, Norfolk Ridge, 23°41' S, 168°15' E, -383–408 m -(MNCN 15.05/60172; paratype 11). +, BATHUS 3 Expedition, st. CP 811, Norfolk Ridge + +, +23°41' S +, +168°15' E +, + +383–408 m + +( +MNCN +15.05/60172; +paratype +11) + +. - - + Fig. 15. @@ -348,7 +495,6 @@ Fig. . Paratype 8, 67.3 × 33.0 mm. Scale bars = 1 mm unless otherwise indicated. - Type locality @@ -397,7 +543,7 @@ sequence): KJ550426 ). This specimen was databased (http://coldb.mnhn.fr/catalognumber/mnhn/im/2007-34866) and sequenced, but the shell was destroyed in the process and is no longer available. - + Fig. 16. Radular teeth extracted from @@ -408,7 +554,7 @@ Radular teeth extracted from A . Optical photomicrograph (paratype 1, MNHN IM-2009-31323, S L 61.3 mm). B -. SEM photomicrograph (paratype 7, MNHN IM- 2000-30785, S L 54.5 mm). +. SEM photomicrograph (paratype 7, MNHN IM-2000-30785, S L 54.5 mm). C . Enlargement of the middle section of B. @@ -428,19 +574,22 @@ Morphometric parameters: S L = Medium-sized to moderately large (maximum length 92.0 mm). Shell profile ventricosely conical to conical, with rounded shoulder and spire low to moderately high. Spire profile sigmoid, occasionally slightly concave. Protoconch multispiral of 3 or more whorls, white to pale violet-brown ( -Fig. 15F +Fig. 15F ). First 4–7 postnuclear whorls nodulose. Teleoconch sutural ramp flat, slightly concave or sigmoid in later whorls, smooth, with cords absent. Last whorl smooth, with fine spiral ribs at base. Ground colour creamy-white to cream. Last whorl with two broad violet-brown, light brown or tan spiral bands above and below midbody, which exhibits broad ground-coloured spiral band. Colour is darker towards base, usually purplish. Narrow ground-colour spiral band often present at height of shoulder. Spire patternless, of ground colour, occasionally showing diffuse pale violet-brown or light brown on top of teleoconch whorls. Aperture light to pinkish brown. Periostracum olive, thin, translucent, smooth. Operculum with lateral serrations. - + Radular tooth examined in paratypes 1 ( -Fig. 16A +Fig. 16A ), 2 and 7 ( -Fig. 16B, C -). 34–45 teeth in radular sac. Radular tooth of rather small relative size: its total length relative to shell length S L/T L = 61–87. Anterior portion shorter than posterior section of tooth (T L/AP L = 3.1–3.4). With one barb and pointed, prominent +Fig. 16B, C +). 34–45 teeth in radular sac. Radular tooth of rather small relative size: its total length relative to shell length S L/T L = 61–87. Anterior portion shorter than posterior section of tooth (T L/AP L = 3.1–3.4). With one barb and pointed, prominent blade which covers 43–54% of apical portion of tooth. External cusp present, extending between 65 and 88% of length of anterior portion of tooth. External cusp not much widened laterally and serrations can be indistinct, with only 0–3 small blunt denticles. Large adapical opening occupying most of anterior portion of tooth (100AO L/AP L = 62–75). With characteristic fringe of closely spaced projections pointing towards the apex located immediately below waist ( +Fig. 16C +). Shaft fold present. Large and prominent basal spur on top of slanted base of tooth. - + + Fig. 17. Distribution map for @@ -451,7 +600,7 @@ Distribution map for Red circles indicate the points where the species has been collected. - + Table 3. Comparison between morphometric parameters for @@ -532,12 +681,6 @@ Comparison between morphometric parameters for 1 For the pairwise comparison of mean S: t = -8.82, p = 6.63 × 10-12; U = 692, p = 1.43 × 10-8. L - -blade which covers 43–54% of apical portion of tooth. External cusp present, extending between 65 and 88% of length of anterior portion of tooth. External cusp not much widened laterally and serrations can be indistinct, with only 0–3 small blunt denticles. Large adapical opening occupying most of anterior portion of tooth (100AO L/AP L = 62–75). With characteristic fringe of closely spaced projections pointing towards the apex located immediately below waist ( -Fig. 16C -). Shaft fold present. Large and prominent basal spur on top of slanted base of tooth. - - @@ -550,7 +693,7 @@ Norfolk Ridge and Loyalty Ridge, , at depths from 290 to 1100 m ( -Fig. 17 +Fig. 17 ). A couple of empty shells resembling P. neocaledonicus @@ -603,7 +746,7 @@ was originally described based upon material from locality: “Off Tosa, Japan ; 100+ fathoms”) ( -Fig. 1A +Fig. 1A ). In recent times, specimens of P. profundorum @@ -611,7 +754,7 @@ locality: “Off Tosa, have become available from China ( -Fig. 1L +Fig. 1L ). These specimens are characterised by their significantly larger mean shell length compared to the Japanese specimens (mean profundorum @@ -650,7 +793,7 @@ and those from from New Caledonia have a different shape, are consistently smaller in average shell length, and are also paler in colour. -Table 3 +Table 3 shows the results of the ANCOVA with the morphometric shell parameters MD, HMD and SH as variables, and using species hypothesis as factor and S L as covariate. Least-squares means are listed, along with average shell lengths for each of the species. @@ -747,7 +890,7 @@ and P. teramachii was not supported at the nodes on the tree in -Fig. 5 +Fig. 5 , P. neocaledonicus @@ -762,7 +905,7 @@ based on shell and radular morphology. The shell of P. smirnoides ( -Fig. 1D +Fig. 1D ) is significantly narrower, less conical and much more highly spired than that of P.neocaledonicus @@ -794,20 +937,20 @@ is much simpler, consisting of pale purplish-brown broad bands on each side of c P. smirnoides ( -Fig. 9H +Fig. 9H ) with that of P. neocaledonicus sp. nov. ( -Fig. 16 +Fig. 16 ) also allows the straightforward separation of the two species. P. teramachii ( -Fig. 1B +Fig. 1B ) has a very different shell, larger in size, and is patternless, with a characteristic stepped spire and with a broadly carinated shoulder, sometimes with densely set rounded tubercles, particularly in smaller adults.