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<mods:title id="907A4E54B0841A58E6734A042BF1340F">Two new species of Diaporthe (Diaporthaceae, Diaporthales) in China</mods:title>
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<mods:namePart>Zhu, Ya-Quan</mods:namePart>
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<mods:affiliation>Key Laboratory of Biodiversity Conservation of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing 100091, China</mods:affiliation>
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<mods:namePart>Ma, Chun-Yan</mods:namePart>
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<mods:affiliation>Natural Resources and Planning Bureau of Rizhao City, Rizhao 276827, China</mods:affiliation>
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<mods:namePart>Xue, Han</mods:namePart>
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<mods:namePart>Piao, Chun-Gen</mods:namePart>
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<mods:affiliation>Key Laboratory of Biodiversity Conservation of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing 100091, China</mods:affiliation>
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<mods:namePart id="BD8C27D65DC33570CFE0319CFB65DA25">Piao, Chun-Gen</mods:namePart>
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<mods:namePart>Li, Yong</mods:namePart>
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<mods:affiliation>Key Laboratory of Biodiversity Conservation of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing 100091, China</mods:affiliation>
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<mods:namePart id="46F5081373542E7108851BF2A6EAFD60">Li, Yong</mods:namePart>
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<mods:affiliation id="C87C21B3766AD4F5C4A72254E760DE84">Key Laboratory of Biodiversity Conservation of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing 100091, China</mods:affiliation>
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<mods:namePart>Jiang, Ning</mods:namePart>
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<mods:affiliation>Key Laboratory of Biodiversity Conservation of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing 100091, China</mods:affiliation>
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<mods:namePart id="A72E84A8303A86FBB46DC984EAE9774B">Jiang, Ning</mods:namePart>
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<mods:affiliation id="EAEB0A5CBFD09BD872C5BE479B4F30F6">Key Laboratory of Biodiversity Conservation of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing 100091, China</mods:affiliation>
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<subSection pageId="0" pageNumber="209" type="results">
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<treatment LSID="urn:lsid:plazi:treatment:1BC54B142E2C59528A5A3DC760DCB39F" httpUri="http://treatment.plazi.org/id/1BC54B142E2C59528A5A3DC760DCB39F" lastPageNumber="209" pageId="0" pageNumber="209">
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<taxonomicName LSID="1BC54B14-2E2C-5952-8A5A-3DC760DCB39F" authority="Y. Q. Zhu & Ning Jiang" authorityName="Y. Q. Zhu & Ning Jiang" authorityYear="2023" class="Ascomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe smilacicola" order="Diaporthales" pageId="0" pageNumber="209" phylum="Ascomycota" rank="species" species="smilacicola" status="sp. nov.">Diaporthe smilacicola Y.Q. Zhu & Ning Jiang</taxonomicName>
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<taxonomicNameLabel pageId="0" pageNumber="209">sp. nov.</taxonomicNameLabel>
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<subSection id="EEE2A6AF758F4DFE5AC9D8013AFF5D7E" pageId="0" pageNumber="209" type="results">
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<treatment id="1BC54B142E2C59528A5A3DC760DCB39F" ID-GBIF-Taxon="209384450" LSID="urn:lsid:plazi:treatment:1BC54B142E2C59528A5A3DC760DCB39F" httpUri="http://treatment.plazi.org/id/1BC54B142E2C59528A5A3DC760DCB39F" lastPageNumber="209" pageId="0" pageNumber="209" scope_family="Diaporthaceae" scope_order="Diaporthales">
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<subSubSection id="10454F6F9BD35A0F70E18AF2F1730478" pageId="0" pageNumber="209" type="nomenclature">
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<paragraph id="90F1048A99E6A5ABEA9A15B9C38D8189" pageId="0" pageNumber="209">
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<taxonomicName id="E7D7BCB5EF2C2EA39CC1291DF954EEB7" LSID="1BC54B14-2E2C-5952-8A5A-3DC760DCB39F" authority="Y. Q. Zhu & Ning Jiang" authorityName="Y. Q. Zhu & Ning Jiang" authorityYear="2023" class="Ascomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="treatment-meta" kingdom="Fungi" lsidName="Diaporthe smilacicola" order="Diaporthales" pageId="0" pageNumber="209" rank="species" species="smilacicola" status="sp. nov.">Diaporthe smilacicola Y.Q. Zhu & Ning Jiang</taxonomicName>
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<taxonomicNameLabel id="AABBE372B78BED13F22397723C68E61C" pageId="0" pageNumber="209">sp. nov.</taxonomicNameLabel>
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</paragraph>
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<subSubSection pageId="0" pageNumber="209" type="description">
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<paragraph pageId="0" pageNumber="209">
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<figureCitation captionStart="Figure 4" captionStartId="F4" captionText="Figure 4. Morphology of Diaporthe smilacicola A colonies on PDA, MEA and SNA at 25 ° C after 2 weeks B leaf spots on the host surface C conidiomata formed on the PDA D, E conidiogenous cells with attached alpha conidia F-G alpha conidia. Scale bars: 200 µm (C); 10 µm (D-G)." figureDoi="10.3897/mycokeys.95.98969.figure4" httpUri="https://binary.pensoft.net/fig/817930" pageId="0" pageNumber="209">Fig. 4</figureCitation>
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<subSubSection id="0C2CB9469E875075CB2A4161FD0B5095" pageId="0" pageNumber="209" type="description">
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<paragraph id="CCB697350A582B2E14AE6C87FA08AA14" pageId="0" pageNumber="209">
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<figureCitation id="D0A943E3422237D7C9C06C3AAE81118D" captionStart="Figure 4" captionStartId="F4" captionText="Figure 4. Morphology of Diaporthe smilacicola A colonies on PDA, MEA and SNA at 25 ° C after 2 weeks B leaf spots on the host surface C conidiomata formed on the PDA D, E conidiogenous cells with attached alpha conidia F-G alpha conidia. Scale bars: 200 µm (C); 10 µm (D-G)." figureDoi="10.3897/mycokeys.95.98969.figure4" httpUri="https://binary.pensoft.net/fig/817930" pageId="0" pageNumber="209">Fig. 4</figureCitation>
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</paragraph>
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</subSubSection>
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<subSubSection pageId="0" pageNumber="209" type="etymology">
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<paragraph pageId="0" pageNumber="209">Etymology.</paragraph>
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<paragraph pageId="0" pageNumber="209">
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<subSubSection id="C7DFEB67A09BD93E43C9510305CD7758" pageId="0" pageNumber="209" type="etymology">
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<paragraph id="4B5A76788891B698041D6F04854F2B16" pageId="0" pageNumber="209">Etymology.</paragraph>
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<paragraph id="530DBF60673827E38766B2625C3180A6" pageId="0" pageNumber="209">
|
||||
Named after the host genus,
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||||
<taxonomicName class="Liliopsida" family="Smilacaceae" genus="Smilax" kingdom="Plantae" lsidName="Smilax" order="Liliales" pageId="0" pageNumber="209" phylum="Tracheophyta" rank="genus">
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<emphasis italics="true" pageId="0" pageNumber="209">Smilax</emphasis>
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||||
<taxonomicName id="042327342B7C699253A9E5DA702A9AD4" class="Liliopsida" family="Smilacaceae" genus="Smilax" kingdom="Plantae" lsidName="Smilax" order="Liliales" pageId="0" pageNumber="209" phylum="Tracheophyta" rank="genus">
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<emphasis id="2924C61B6A91C4B5F6880BF43943A842" italics="true" pageId="0" pageNumber="209">Smilax</emphasis>
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||||
</taxonomicName>
|
||||
.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="0" pageNumber="209" type="description">
|
||||
<paragraph pageId="0" pageNumber="209">Description.</paragraph>
|
||||
<paragraph pageId="0" pageNumber="209">
|
||||
<emphasis bold="true" italics="true" pageId="0" pageNumber="209">Leaf spots</emphasis>
|
||||
<subSubSection id="F9D796B0A421814F150B88FB5FABD6AE" pageId="0" pageNumber="209" type="description">
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||||
<paragraph id="1FA6BD4DD7AC2B0DF9EFF3491D16EAF7" pageId="0" pageNumber="209">Description.</paragraph>
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<paragraph id="7C94216AE0251FF14069275C876F3E1A" pageId="0" pageNumber="209">
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||||
<emphasis id="578F51A8117FB080FC61A843F8757F13" bold="true" italics="true" pageId="0" pageNumber="209">Leaf spots</emphasis>
|
||||
subcircular to irregular, pale brown to brown, with dark brown margin.
|
||||
<emphasis bold="true" italics="true" pageId="0" pageNumber="209">Conidiomata</emphasis>
|
||||
<emphasis id="1A42B085176BADE354009CA75BCD59E5" bold="true" italics="true" pageId="0" pageNumber="209">Conidiomata</emphasis>
|
||||
pycnidial, scattered, subglobose to globose, black, erumpent, exuding faint yellow translucent conidial droplets from central ostioles, 150-350
|
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<normalizedToken originalValue="μm">μm</normalizedToken>
|
||||
<normalizedToken id="AE2AABBBA95CE26A937D535D451689AA" originalValue="μm">μm</normalizedToken>
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||||
diam.
|
||||
<emphasis bold="true" italics="true" pageId="0" pageNumber="209">Conidiogenous cells</emphasis>
|
||||
<emphasis id="568A715D23C7A9860D87592F879A5046" bold="true" italics="true" pageId="0" pageNumber="209">Conidiogenous cells</emphasis>
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||||
11-16.2
|
||||
<normalizedToken originalValue="×">x</normalizedToken>
|
||||
<normalizedToken id="E621FDC2AF5BCE7DDD029B05D06EDFAC" originalValue="×">x</normalizedToken>
|
||||
1.8-2.4
|
||||
<normalizedToken originalValue="μm">μm</normalizedToken>
|
||||
<normalizedToken id="56AD163EECDB1B49739942C358D52CF0" originalValue="μm">μm</normalizedToken>
|
||||
, hyaline, phialidic, cylindrical, terminal, slightly tapering towards the apex.
|
||||
<emphasis bold="true" italics="true" pageId="0" pageNumber="209">Alpha conidia</emphasis>
|
||||
<emphasis id="5FCE7C431439BFA882E9A04C377F2423" bold="true" italics="true" pageId="0" pageNumber="209">Alpha conidia</emphasis>
|
||||
5.7-9.7
|
||||
<normalizedToken originalValue="×">x</normalizedToken>
|
||||
<normalizedToken id="E81417A13266F90A4673CDD8657F09C4" originalValue="×">x</normalizedToken>
|
||||
2.0-3.5
|
||||
<normalizedToken originalValue="μm">μm</normalizedToken>
|
||||
<normalizedToken id="29816683913531393E33EF81EBC591CA" originalValue="μm">μm</normalizedToken>
|
||||
(mean = 7.8
|
||||
<normalizedToken originalValue="×">x</normalizedToken>
|
||||
<normalizedToken id="888548D45C0DB575DC6D3FAACEB5BE38" originalValue="×">x</normalizedToken>
|
||||
2.6
|
||||
<normalizedToken originalValue="μm">μm</normalizedToken>
|
||||
<normalizedToken id="BF4C2F977C26A786C24973ABCE44A2B2" originalValue="μm">μm</normalizedToken>
|
||||
, n = 50), hyaline, aseptate, smooth, guttulate, ellipsoidal to oblong ellipsoidal, with both ends obtuse.
|
||||
<emphasis bold="true" italics="true" pageId="0" pageNumber="209">Beta conidia and gamma conidia</emphasis>
|
||||
<emphasis id="9E7397B8C0361EE9B1FD927F59F09C2C" bold="true" italics="true" pageId="0" pageNumber="209">Beta conidia and gamma conidia</emphasis>
|
||||
not observed.
|
||||
<emphasis bold="true" italics="true" pageId="0" pageNumber="209">Sexual morph</emphasis>
|
||||
<emphasis id="65E9555927C6B19FEF23CAB9607423B7" bold="true" italics="true" pageId="0" pageNumber="209">Sexual morph</emphasis>
|
||||
not observed.
|
||||
</paragraph>
|
||||
<caption doi="10.3897/mycokeys.95.98969.figure4" httpUri="https://binary.pensoft.net/fig/817930" pageId="0" pageNumber="209" start="Figure 4" startId="F4">
|
||||
<paragraph pageId="0" pageNumber="209">
|
||||
<emphasis bold="true" pageId="0" pageNumber="209">Figure 4.</emphasis>
|
||||
<caption id="2ABCD8071724078D5367882AB731697D" doi="10.3897/mycokeys.95.98969.figure4" httpUri="https://binary.pensoft.net/fig/817930" pageId="0" pageNumber="209" start="Figure 4" startId="F4">
|
||||
<paragraph id="A159BA551381192FB4BC9FD7516267D4" pageId="0" pageNumber="209">
|
||||
<emphasis id="47F840C3FEDF604B9091F82F041DA69B" bold="true" pageId="0" pageNumber="209">Figure 4.</emphasis>
|
||||
Morphology of
|
||||
<taxonomicName authorityName="Y. Q. Zhu & Ning Jiang" authorityYear="2023" class="Ascomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe smilacicola" order="Diaporthales" pageId="0" pageNumber="209" phylum="Ascomycota" rank="species" species="smilacicola">
|
||||
<emphasis italics="true" pageId="0" pageNumber="209">Diaporthe smilacicola</emphasis>
|
||||
<taxonomicName id="C9FA0EC565BE093170195C3530DFA5A7" authorityName="Y. Q. Zhu & Ning Jiang" authorityYear="2023" class="Ascomycetes" family="Diaporthaceae" genus="Diaporthe" kingdom="Fungi" lsidName="Diaporthe smilacicola" order="Diaporthales" pageId="0" pageNumber="209" rank="species" species="smilacicola">
|
||||
<emphasis id="3DBF988ACD16691260DC9A607C1517F9" italics="true" pageId="0" pageNumber="209">Diaporthe smilacicola</emphasis>
|
||||
</taxonomicName>
|
||||
<emphasis bold="true" pageId="0" pageNumber="209">A</emphasis>
|
||||
<emphasis id="F0341714A07DC1A391A309E3267995CD" bold="true" pageId="0" pageNumber="209">A</emphasis>
|
||||
colonies on PDA, MEA and SNA at 25 °C after 2 weeks
|
||||
<emphasis bold="true" pageId="0" pageNumber="209">B</emphasis>
|
||||
<emphasis id="A03A61EE27B62008786764EFECC1E1F4" bold="true" pageId="0" pageNumber="209">B</emphasis>
|
||||
leaf spots on the host surface
|
||||
<emphasis bold="true" pageId="0" pageNumber="209">C</emphasis>
|
||||
<emphasis id="AF6CC33E27B327BA4C1D33AED9F15BB6" bold="true" pageId="0" pageNumber="209">C</emphasis>
|
||||
conidiomata formed on the PDA
|
||||
<emphasis bold="true" pageId="0" pageNumber="209">D, E</emphasis>
|
||||
<emphasis id="33847574584613810D78A3DA63A70349" bold="true" pageId="0" pageNumber="209">D, E</emphasis>
|
||||
conidiogenous cells with attached alpha conidia
|
||||
<emphasis bold="true" pageId="0" pageNumber="209">F-G</emphasis>
|
||||
<emphasis id="AEAC9805992A9BFF84FEFABB54DEB808" bold="true" pageId="0" pageNumber="209">F-G</emphasis>
|
||||
alpha conidia. Scale bars: 200
|
||||
<normalizedToken originalValue="µm">µm</normalizedToken>
|
||||
<normalizedToken id="C8FD5185CA6F995AA3F78D1909A5105A" originalValue="µm">µm</normalizedToken>
|
||||
(
|
||||
<emphasis bold="true" pageId="0" pageNumber="209">C</emphasis>
|
||||
<emphasis id="56AE2462113BE3F33F9951AD1C47FC77" bold="true" pageId="0" pageNumber="209">C</emphasis>
|
||||
); 10
|
||||
<normalizedToken originalValue="µm">µm</normalizedToken>
|
||||
<normalizedToken id="5A15EE3415BEF73180D2F5D5747049CE" originalValue="µm">µm</normalizedToken>
|
||||
(
|
||||
<emphasis bold="true" pageId="0" pageNumber="209">D-G</emphasis>
|
||||
<emphasis id="7EE570997C6DB3FEC60298DF259E376E" bold="true" pageId="0" pageNumber="209">D-G</emphasis>
|
||||
).
|
||||
</paragraph>
|
||||
</caption>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="0" pageNumber="209" type="description">
|
||||
<paragraph pageId="0" pageNumber="209">Culture characters.</paragraph>
|
||||
<paragraph pageId="0" pageNumber="209">Colonies on PDA flat, with flocculent aerial mycelium and crenate edge, white to gray, reaching a 90 mm diameter after 14 days at 25 °C, forming black conidiomata with black conidial masses; on MEA flat, spreading, with flocculent aerial mycelium forming concentric rings, off-white to luteous, reaching a 90 mm diameter after 14 days at 25 °C; on SNA flat, spreading, with flocculent aerial mycelium forming concentric rings and entire edge, white, reaching a 90 mm diameter after 14 days at 25 °C.</paragraph>
|
||||
<subSubSection id="1DC87634440B6F0591FDA69BC0A20431" pageId="0" pageNumber="209" type="description">
|
||||
<paragraph id="FCF48D1A1D0463A1FE74E67CFCABD27F" pageId="0" pageNumber="209">Culture characters.</paragraph>
|
||||
<paragraph id="4119ABB4D074824331E271600C056EE8" pageId="0" pageNumber="209">Colonies on PDA flat, with flocculent aerial mycelium and crenate edge, white to gray, reaching a 90 mm diameter after 14 days at 25 °C, forming black conidiomata with black conidial masses; on MEA flat, spreading, with flocculent aerial mycelium forming concentric rings, off-white to luteous, reaching a 90 mm diameter after 14 days at 25 °C; on SNA flat, spreading, with flocculent aerial mycelium forming concentric rings and entire edge, white, reaching a 90 mm diameter after 14 days at 25 °C.</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="0" pageNumber="209" type="materials_examined">
|
||||
<paragraph pageId="0" pageNumber="209">Materials examined.</paragraph>
|
||||
<paragraph pageId="0" pageNumber="209">
|
||||
<materialsCitation collectingDate="2020-11-02" country="China" county="Changsha County" location="Kaihui Town" municipality="Changsha City" specimenCount="1" stateProvince="Hunan Province" typeStatus="holotype">
|
||||
<collectingCountry name="China">China</collectingCountry>
|
||||
<subSubSection id="9D258683829A0AFBCCA2F40036970AEE" pageId="0" pageNumber="209" type="materials_examined">
|
||||
<paragraph id="B2951AE944E87904F715CF721F6703B8" pageId="0" pageNumber="209">Materials examined.</paragraph>
|
||||
<paragraph id="D6D349E3FFECCD8945AF4C042514F56F" pageId="0" pageNumber="209">
|
||||
<materialsCitation id="8E105FC4FAE2CBA3BAE0371DECAD945E" collectingDate="2020-11-02" country="China" county="Changsha County" location="Kaihui Town" municipality="Changsha City" specimenCount="1" stateProvince="Hunan Province" typeStatus="holotype">
|
||||
<collectingCountry id="F2B67FAA551DDFDE5924CBFF42A08E2C" name="China">China</collectingCountry>
|
||||
,
|
||||
<collectingRegion country="China" name="Hunan">Hunan Province</collectingRegion>
|
||||
<collectingRegion id="CAB55769666AB355C4D97C01BE09DA00" country="China" name="Hunan">Hunan Province</collectingRegion>
|
||||
,
|
||||
<collectingMunicipality>Changsha City</collectingMunicipality>
|
||||
<collectingMunicipality id="14CAF94F17B69F226BFA8B850B9F4598">Changsha City</collectingMunicipality>
|
||||
,
|
||||
<collectingCounty>Changsha County</collectingCounty>
|
||||
<collectingCounty id="0EF023180635C62D7AC4E3F654010A3A">Changsha County</collectingCounty>
|
||||
,
|
||||
<location LSID="urn:lsid:plazi:treatment:1BC54B142E2C59528A5A3DC760DCB39F:80FDA34D575111FCE30F7C2AD44E33FC" country="China" county="Changsha County" municipality="Changsha City" name="Kaihui Town" stateProvince="Hunan Province">Kaihui Town</location>
|
||||
<location id="80FDA34D575111FCE30F7C2AD44E33FC" LSID="urn:lsid:plazi:treatment:1BC54B142E2C59528A5A3DC760DCB39F:80FDA34D575111FCE30F7C2AD44E33FC" country="China" county="Changsha County" municipality="Changsha City" name="Kaihui Town" stateProvince="Hunan Province">Kaihui Town</location>
|
||||
, on leaf spots of
|
||||
<taxonomicName class="Liliopsida" family="Smilacaceae" genus="Smilax" kingdom="Plantae" lsidName="Smilax glabra" order="Liliales" pageId="0" pageNumber="209" phylum="Tracheophyta" rank="species" species="glabra">
|
||||
<emphasis italics="true" pageId="0" pageNumber="209">Smilax glabra</emphasis>
|
||||
<taxonomicName id="013597ED917177E59CCD2AEFDFFCC552" class="Liliopsida" family="Smilacaceae" genus="Smilax" kingdom="Plantae" lsidName="Smilax glabra" order="Liliales" pageId="0" pageNumber="209" phylum="Tracheophyta" rank="species" species="glabra">
|
||||
<emphasis id="B3EF28DCCA345E44CB5A8C3FF153A080" italics="true" pageId="0" pageNumber="209">Smilax glabra</emphasis>
|
||||
</taxonomicName>
|
||||
,
|
||||
<collectingDate value="2020-11-02">2 November 2020</collectingDate>
|
||||
<collectingDate id="C513A6BB373EBDBE5876A8DF2A100FFB" value="2020-11-02">2 November 2020</collectingDate>
|
||||
, Ning Jiang (
|
||||
<typeStatus>holotype</typeStatus>
|
||||
<typeStatus id="58D65997F5DB95DC1ABB2E2C194102A1">holotype</typeStatus>
|
||||
CAF 800070; ex-holotype culture CFCC 54582)
|
||||
</materialsCitation>
|
||||
.
|
||||
<materialsCitation collectingDate="2020-11-02" country="China" location="Shaoshan City" specimenCount="1" stateProvince="Hunan Province" typeStatus="holotype">
|
||||
<collectingRegion country="China" name="Hunan">Hunan Province</collectingRegion>
|
||||
<materialsCitation id="E732B155FBE1A88EEEACB87600F08D7D" collectingDate="2020-11-02" country="China" location="Shaoshan City" specimenCount="1" stateProvince="Hunan Province" typeStatus="holotype">
|
||||
<collectingRegion id="C58B7F985ED68222F2F6A50D653B15CC" country="China" name="Hunan">Hunan Province</collectingRegion>
|
||||
,
|
||||
<location LSID="urn:lsid:plazi:treatment:1BC54B142E2C59528A5A3DC760DCB39F:0C82551F3AA461C18327B3DCFCC9F369" country="China" name="Shaoshan City" stateProvince="Hunan Province">Shaoshan City</location>
|
||||
<location id="0C82551F3AA461C18327B3DCFCC9F369" LSID="urn:lsid:plazi:treatment:1BC54B142E2C59528A5A3DC760DCB39F:0C82551F3AA461C18327B3DCFCC9F369" country="China" name="Shaoshan City" stateProvince="Hunan Province">Shaoshan City</location>
|
||||
, on leaf spots of
|
||||
<taxonomicName class="Liliopsida" family="Smilacaceae" genus="Smilax" kingdom="Plantae" lsidName="Smilax glabra" order="Liliales" pageId="0" pageNumber="209" phylum="Tracheophyta" rank="species" species="glabra">
|
||||
<emphasis italics="true" pageId="0" pageNumber="209">Smilax glabra</emphasis>
|
||||
<taxonomicName id="F0DEBCA02222B35C9769954D1F6E34EF" class="Liliopsida" family="Smilacaceae" genus="Smilax" kingdom="Plantae" lsidName="Smilax glabra" order="Liliales" pageId="0" pageNumber="209" phylum="Tracheophyta" rank="species" species="glabra">
|
||||
<emphasis id="CCD9D3886B495D28269F2ABFBEC3C685" italics="true" pageId="0" pageNumber="209">Smilax glabra</emphasis>
|
||||
</taxonomicName>
|
||||
,
|
||||
<collectingDate value="2020-11-02">2 November 2020</collectingDate>
|
||||
<collectingDate id="32D7738D7A28D989C85D4BF42BAD3A14" value="2020-11-02">2 November 2020</collectingDate>
|
||||
, Ning Jiang (cultures CFCC 58764 and CFCC 58765)
|
||||
</materialsCitation>
|
||||
.
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
<subSubSection pageId="0" pageNumber="209" type="notes">
|
||||
<paragraph pageId="0" pageNumber="209">Notes.</paragraph>
|
||||
<paragraph pageId="0" pageNumber="209">
|
||||
<subSubSection id="A434CA7A8ACF6EF38475E18E198FD1D4" pageId="0" pageNumber="209" type="notes">
|
||||
<paragraph id="206362D96A67DF915B550DBC8EBA5C1D" pageId="0" pageNumber="209">Notes.</paragraph>
|
||||
<paragraph id="42A6AEF5A1DEB268879FDE858EDF09BC" pageId="0" pageNumber="209">
|
||||
Three
|
||||
<taxonomicName authorityName="Nitschke & Pyrenomyc.Germ" authorityYear="1870" class="Ascomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe" order="Diaporthales" pageId="0" pageNumber="209" phylum="Ascomycota" rank="genus">
|
||||
<emphasis italics="true" pageId="0" pageNumber="209">Diaporthe</emphasis>
|
||||
<taxonomicName id="679528E45D82D45F4C6A228EF011E96C" authorityName="Nitschke & Pyrenomyc.Germ" authorityYear="1870" class="Ascomycetes" family="Diaporthaceae" genus="Diaporthe" kingdom="Fungi" lsidName="Diaporthe" order="Diaporthales" pageId="0" pageNumber="209" rank="genus">
|
||||
<emphasis id="B5AEAC6EC92132F8E3B12AE4408C93B2" italics="true" pageId="0" pageNumber="209">Diaporthe</emphasis>
|
||||
</taxonomicName>
|
||||
isolates representing
|
||||
<taxonomicName lsidName="D. smilacicola" pageId="0" pageNumber="209" rank="species" species="smilacicola">
|
||||
<emphasis italics="true" pageId="0" pageNumber="209">D. smilacicola</emphasis>
|
||||
<taxonomicName id="3F183282715B4F03C7C273D8F3C91138" lsidName="D. smilacicola" pageId="0" pageNumber="209" rank="species" species="smilacicola">
|
||||
<emphasis id="D539EB711A4987261E6DE2B071175896" italics="true" pageId="0" pageNumber="209">D. smilacicola</emphasis>
|
||||
</taxonomicName>
|
||||
formed a well-supported clade (ML/BI = 100/1), and appear to be distinct from the other
|
||||
<taxonomicName authorityName="Nitschke & Pyrenomyc.Germ" authorityYear="1870" class="Ascomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe" order="Diaporthales" pageId="0" pageNumber="209" phylum="Ascomycota" rank="genus">
|
||||
<emphasis italics="true" pageId="0" pageNumber="209">Diaporthe</emphasis>
|
||||
<taxonomicName id="909345E3A65DD3A6C25C23F840D6C6A9" authorityName="Nitschke & Pyrenomyc.Germ" authorityYear="1870" class="Ascomycetes" family="Diaporthaceae" genus="Diaporthe" kingdom="Fungi" lsidName="Diaporthe" order="Diaporthales" pageId="0" pageNumber="209" rank="genus">
|
||||
<emphasis id="D9DBF91C7A21268A7D124D8E976CC140" italics="true" pageId="0" pageNumber="209">Diaporthe</emphasis>
|
||||
</taxonomicName>
|
||||
species phylogenetically (Fig.
|
||||
<figureCitation captionStart="Figure 2" captionStartId="F2" captionText="Figure 2. Phylogram of Diaporthe arecae species complex resulting from a maximum likelihood analysis based on a combined matrix of ITS, cal, his 3, tef 1 and tub 2 loci. Numbers above the branches indicate ML bootstrap values (left, ML BS ≥ 50 %) and Bayesian posterior probabilities (right, BPP ≥ 0.9). Isolates from the present study are marked in bold blue." figureDoi="10.3897/mycokeys.95.98969.figure2" httpUri="https://binary.pensoft.net/fig/817928" pageId="0" pageNumber="209">2</figureCitation>
|
||||
<figureCitation id="49213B46C014698410B3787794202312" captionStart="Figure 2" captionStartId="F2" captionText="Figure 2. Phylogram of Diaporthe arecae species complex resulting from a maximum likelihood analysis based on a combined matrix of ITS, cal, his 3, tef 1 and tub 2 loci. Numbers above the branches indicate ML bootstrap values (left, ML BS ≥ 50 %) and Bayesian posterior probabilities (right, BPP ≥ 0.9). Isolates from the present study are marked in bold blue." figureDoi="10.3897/mycokeys.95.98969.figure2" httpUri="https://binary.pensoft.net/fig/817928" pageId="0" pageNumber="209">2</figureCitation>
|
||||
).
|
||||
<taxonomicName class="Ascomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe eres" order="Diaporthales" pageId="0" pageNumber="209" phylum="Ascomycota" rank="species" species="eres">
|
||||
<emphasis italics="true" pageId="0" pageNumber="209">Diaporthe eres</emphasis>
|
||||
<taxonomicName id="A023D02A5976540B5B05753D00EF70C6" class="Ascomycetes" family="Diaporthaceae" genus="Diaporthe" kingdom="Fungi" lsidName="Diaporthe eres" order="Diaporthales" pageId="0" pageNumber="209" rank="species" species="eres">
|
||||
<emphasis id="3334CA74BB4AD44F2BEC8C1424C0F676" italics="true" pageId="0" pageNumber="209">Diaporthe eres</emphasis>
|
||||
</taxonomicName>
|
||||
(=
|
||||
<taxonomicName lsidName="D. mahothocarpi" pageId="0" pageNumber="209" rank="species" species="mahothocarpi">
|
||||
<emphasis italics="true" pageId="0" pageNumber="209">D. mahothocarpi</emphasis>
|
||||
<taxonomicName id="E8942475366F728EE9163402F57E42C2" lsidName="D. mahothocarpi" pageId="0" pageNumber="209" rank="species" species="mahothocarpi">
|
||||
<emphasis id="18CB727CD6C501FD0D3553365F7E9C58" italics="true" pageId="0" pageNumber="209">D. mahothocarpi</emphasis>
|
||||
</taxonomicName>
|
||||
),
|
||||
<taxonomicName lsidName="D. lithocarpi" pageId="0" pageNumber="209" rank="species" species="lithocarpi">
|
||||
<emphasis italics="true" pageId="0" pageNumber="209">D. lithocarpi</emphasis>
|
||||
<taxonomicName id="6ABBD485BB9C4C6127188BC30F512284" lsidName="D. lithocarpi" pageId="0" pageNumber="209" rank="species" species="lithocarpi">
|
||||
<emphasis id="7A06189B7487D754AE2DB7604C92AD74" italics="true" pageId="0" pageNumber="209">D. lithocarpi</emphasis>
|
||||
</taxonomicName>
|
||||
and
|
||||
<taxonomicName lsidName="D. smilacicola" pageId="0" pageNumber="209" rank="species" species="smilacicola">
|
||||
<emphasis italics="true" pageId="0" pageNumber="209">D. smilacicola</emphasis>
|
||||
<taxonomicName id="77BA1AD4C2F5023B1F2CB8D136C8D1F9" lsidName="D. smilacicola" pageId="0" pageNumber="209" rank="species" species="smilacicola">
|
||||
<emphasis id="0A2EE176EC4537B4D13788EEAB532CD1" italics="true" pageId="0" pageNumber="209">D. smilacicola</emphasis>
|
||||
</taxonomicName>
|
||||
have been reported from the host
|
||||
<taxonomicName lsidName="S. glabra" pageId="0" pageNumber="209" rank="species" species="glabra">
|
||||
<emphasis italics="true" pageId="0" pageNumber="209">S. glabra</emphasis>
|
||||
<taxonomicName id="C43C59B2FC20DE01F06A1F131509855A" lsidName="S. glabra" pageId="0" pageNumber="209" rank="species" species="glabra">
|
||||
<emphasis id="75724CC7174AC487B0FC75AAD27CA4F6" italics="true" pageId="0" pageNumber="209">S. glabra</emphasis>
|
||||
</taxonomicName>
|
||||
(
|
||||
<bibRefCitation DOI="https://doi.org/10.1007/s11557-013-0898-2" author="Gao, YH" journalOrPublisher="Mycological Progress" pageId="0" pageNumber="209" pagination="111 - 121" refId="B17" refString="Gao, YH, Sun, W, Su, YY, Cai, L, 2013. Three new species of Phomopsis in Gutianshan nature reserve in China. Mycological Progress 13 (1): 111 - 121, DOI: https://doi.org/10.1007/s11557-013-0898-2" title="Three new species of Phomopsis in Gutianshan nature reserve in China." url="https://doi.org/10.1007/s11557-013-0898-2" volume="13" year="2013">Gao et al. 2013</bibRefCitation>
|
||||
<bibRefCitation id="3EE4883873485CAD7C906F43EE1BF3F8" DOI="https://doi.org/10.1007/s11557-013-0898-2" author="Gao, YH" journalOrPublisher="Mycological Progress" pageId="0" pageNumber="209" pagination="111 - 121" refId="B17" refString="Gao, YH, Sun, W, Su, YY, Cai, L, 2013. Three new species of Phomopsis in Gutianshan nature reserve in China. Mycological Progress 13 (1): 111 - 121, DOI: https://doi.org/10.1007/s11557-013-0898-2" title="Three new species of Phomopsis in Gutianshan nature reserve in China." url="https://doi.org/10.1007/s11557-013-0898-2" volume="13" year="2013">Gao et al. 2013</bibRefCitation>
|
||||
;
|
||||
<bibRefCitation DOI="https://doi.org/10.3390/biology10030179" author="Chaisiri, C" journalOrPublisher="Biology (Basel)" pageId="0" pageNumber="209" pagination=": 179" refId="B5" refString="Chaisiri, C, Liu, X, Lin, Y, Fu, Y, Zhu, F, Luo, C, 2021. Phylogenetic and haplotype network analyses of Diaporthe eres species in China based on sequences of multiple loci. Biology (Basel) 10 (3): 179, DOI: https://doi.org/10.3390/biology10030179" title="Phylogenetic and haplotype network analyses of Diaporthe eres species in China based on sequences of multiple loci." url="https://doi.org/10.3390/biology10030179" volume="10" year="2021">Chaisiri et al. 2021</bibRefCitation>
|
||||
<bibRefCitation id="44BD2F5ED788956CED4045BA5E346674" DOI="https://doi.org/10.3390/biology10030179" author="Chaisiri, C" journalOrPublisher="Biology (Basel)" pageId="0" pageNumber="209" pagination=": 179" refId="B5" refString="Chaisiri, C, Liu, X, Lin, Y, Fu, Y, Zhu, F, Luo, C, 2021. Phylogenetic and haplotype network analyses of Diaporthe eres species in China based on sequences of multiple loci. Biology (Basel) 10 (3): 179, DOI: https://doi.org/10.3390/biology10030179" title="Phylogenetic and haplotype network analyses of Diaporthe eres species in China based on sequences of multiple loci." url="https://doi.org/10.3390/biology10030179" volume="10" year="2021">Chaisiri et al. 2021</bibRefCitation>
|
||||
). Morphologically, these three species are similar in conidial shape and size. However,
|
||||
<taxonomicName class="Ascomycetes" family="Diaporthaceae" genus="Diaporthe" higherTaxonomySource="CoL" kingdom="Fungi" lsidName="Diaporthe eres" order="Diaporthales" pageId="0" pageNumber="209" phylum="Ascomycota" rank="species" species="eres">
|
||||
<emphasis italics="true" pageId="0" pageNumber="209">Diaporthe eres</emphasis>
|
||||
<taxonomicName id="17338678CA118FCABBAF9A0592D63435" class="Ascomycetes" family="Diaporthaceae" genus="Diaporthe" kingdom="Fungi" lsidName="Diaporthe eres" order="Diaporthales" pageId="0" pageNumber="209" rank="species" species="eres">
|
||||
<emphasis id="40BA1F4A47C859D10C8A27D3A5E0ACF0" italics="true" pageId="0" pageNumber="209">Diaporthe eres</emphasis>
|
||||
</taxonomicName>
|
||||
belongs to
|
||||
<taxonomicName lsidName="D. eres" pageId="0" pageNumber="209" rank="species" species="eres">
|
||||
<emphasis italics="true" pageId="0" pageNumber="209">D. eres</emphasis>
|
||||
<taxonomicName id="0938D7DC380D48C30BE2223B8240F30B" lsidName="D. eres" pageId="0" pageNumber="209" rank="species" species="eres">
|
||||
<emphasis id="2086D709F6E3F315CBE41140A7D53CD7" italics="true" pageId="0" pageNumber="209">D. eres</emphasis>
|
||||
</taxonomicName>
|
||||
species complex, which is different from
|
||||
<taxonomicName lsidName="D. lithocarpi" pageId="0" pageNumber="209" rank="species" species="lithocarpi">
|
||||
<emphasis italics="true" pageId="0" pageNumber="209">D. lithocarpi</emphasis>
|
||||
<taxonomicName id="2243B7CB1073FE2D1E65CF132F499A36" lsidName="D. lithocarpi" pageId="0" pageNumber="209" rank="species" species="lithocarpi">
|
||||
<emphasis id="CDC6A2049B5EB34ED47B8B6B1EF91DA0" italics="true" pageId="0" pageNumber="209">D. lithocarpi</emphasis>
|
||||
</taxonomicName>
|
||||
and
|
||||
<taxonomicName lsidName="D. smilacicola" pageId="0" pageNumber="209" rank="species" species="smilacicola">
|
||||
<emphasis italics="true" pageId="0" pageNumber="209">D. smilacicola</emphasis>
|
||||
<taxonomicName id="3D9ADAC5A3FA55DE6894FAD2162BEDA9" lsidName="D. smilacicola" pageId="0" pageNumber="209" rank="species" species="smilacicola">
|
||||
<emphasis id="02F4AB56A8FDFF8610497FDA453E674A" italics="true" pageId="0" pageNumber="209">D. smilacicola</emphasis>
|
||||
</taxonomicName>
|
||||
in
|
||||
<taxonomicName lsidName="D. arecae" pageId="0" pageNumber="209" rank="species" species="arecae">
|
||||
<emphasis italics="true" pageId="0" pageNumber="209">D. arecae</emphasis>
|
||||
<taxonomicName id="74DFA78FC44B3C63513D89AEB05B329B" lsidName="D. arecae" pageId="0" pageNumber="209" rank="species" species="arecae">
|
||||
<emphasis id="CBD940BD86F66A7B75AF06FAB90A1C69" italics="true" pageId="0" pageNumber="209">D. arecae</emphasis>
|
||||
</taxonomicName>
|
||||
species complex.
|
||||
<taxonomicName lsidName="D. smilacicola" pageId="0" pageNumber="209" rank="species" species="smilacicola">
|
||||
<emphasis italics="true" pageId="0" pageNumber="209">D. smilacicola</emphasis>
|
||||
<taxonomicName id="3DCA2ECB8C96772428828109F4377A53" lsidName="D. smilacicola" pageId="0" pageNumber="209" rank="species" species="smilacicola">
|
||||
<emphasis id="F51118F9604C1383AD0E7A20C0AC4DB5" italics="true" pageId="0" pageNumber="209">D. smilacicola</emphasis>
|
||||
</taxonomicName>
|
||||
is obviously different from
|
||||
<taxonomicName lsidName="D. lithocarpi" pageId="0" pageNumber="209" rank="species" species="lithocarpi">
|
||||
<emphasis italics="true" pageId="0" pageNumber="209">D. lithocarpi</emphasis>
|
||||
<taxonomicName id="90F0F795DB229393B8BCC3AC95BB19EB" lsidName="D. lithocarpi" pageId="0" pageNumber="209" rank="species" species="lithocarpi">
|
||||
<emphasis id="6489CF23851EC27C2F6D0A7F2EC8CA95" italics="true" pageId="0" pageNumber="209">D. lithocarpi</emphasis>
|
||||
</taxonomicName>
|
||||
based on sequence data (22/467 in ITS, 31/393 in
|
||||
<emphasis italics="true" pageId="0" pageNumber="209">cal</emphasis>
|
||||
<emphasis id="DB051305DCF940B55E1C5D2167CFDEA5" italics="true" pageId="0" pageNumber="209">cal</emphasis>
|
||||
, 52/317 in
|
||||
<emphasis italics="true" pageId="0" pageNumber="209">tef1</emphasis>
|
||||
<emphasis id="9986211AFBE3B354F05B72FC8831CF21" italics="true" pageId="0" pageNumber="209">tef1</emphasis>
|
||||
, 19/420 in
|
||||
<emphasis italics="true" pageId="0" pageNumber="209">tub2</emphasis>
|
||||
<emphasis id="E997DEFFBC567A8A3F0A68E0A804D1DB" italics="true" pageId="0" pageNumber="209">tub2</emphasis>
|
||||
) (Fig.
|
||||
<figureCitation captionStart="Figure 2" captionStartId="F2" captionText="Figure 2. Phylogram of Diaporthe arecae species complex resulting from a maximum likelihood analysis based on a combined matrix of ITS, cal, his 3, tef 1 and tub 2 loci. Numbers above the branches indicate ML bootstrap values (left, ML BS ≥ 50 %) and Bayesian posterior probabilities (right, BPP ≥ 0.9). Isolates from the present study are marked in bold blue." figureDoi="10.3897/mycokeys.95.98969.figure2" httpUri="https://binary.pensoft.net/fig/817928" pageId="0" pageNumber="209">2</figureCitation>
|
||||
<figureCitation id="33AA75F7652809255E14342C8082DB24" captionStart="Figure 2" captionStartId="F2" captionText="Figure 2. Phylogram of Diaporthe arecae species complex resulting from a maximum likelihood analysis based on a combined matrix of ITS, cal, his 3, tef 1 and tub 2 loci. Numbers above the branches indicate ML bootstrap values (left, ML BS ≥ 50 %) and Bayesian posterior probabilities (right, BPP ≥ 0.9). Isolates from the present study are marked in bold blue." figureDoi="10.3897/mycokeys.95.98969.figure2" httpUri="https://binary.pensoft.net/fig/817928" pageId="0" pageNumber="209">2</figureCitation>
|
||||
).
|
||||
</paragraph>
|
||||
</subSubSection>
|
||||
|
|
|
|||
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