269 lines
32 KiB
XML
269 lines
32 KiB
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<document id="D791B63D74392313A30FFE071ABFF5C0" ID-DOI="10.1111/zoj.12316" ID-ISSN="0024-4082" ID-Zenodo-Dep="5357381" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="existingObjects,plazi" IM.taxonomicNames_approvedBy="felipe" checkinTime="1630220095447" checkinUser="marcus" docAuthor="Archidona-Yuste, Antonio, Navas-Cortés, Juan A., Cantalapiedra-Navarrete, Carolina, Palomares-Rius, Juan E. & Castillo, Pablo" docDate="2016" docId="03A06734FFEFFFCD57F9FBC1FC9EF912" docLanguage="en" docName="zoj12316.pdf" docOrigin="Zoological Journal of the Linnean Society 176 (2)" docSource="https://academic.oup.com/zoolinnean/article-lookup/doi/10.1111/zoj.12316" docStyle="DocumentStyle:FBF0BF18BB2B256F1F8008F27D80BF37.3:ZoolJLinnSoc.2010-2016.journal_article" docStyleId="FBF0BF18BB2B256F1F8008F27D80BF37" docStyleName="ZoolJLinnSoc.2010-2016.journal_article" docStyleVersion="3" docTitle="Xiphinema plesiopachtaicum Archidona-Yuste & Navas-Cortés & Cantalapiedra-Navarrete & Palomares-Rius & Castillo 2016, SP. NOV." docType="treatment" docVersion="3" lastPageNumber="238" masterDocId="FF991F4CFFE9FFCA572FFF93FF95FFD7" masterDocTitle="Cryptic diversity and species delimitation in the Xiphinema americanum-group complex (Nematoda: Longidoridae) as inferred from morphometrics and molecular markers" masterLastPageNumber="265" masterPageNumber="231" pageNumber="237" updateTime="1699191091726" updateUser="plazi">
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<mods:title id="56312140FCDD4CA3722F1E17EAAF87E1">Cryptic diversity and species delimitation in the Xiphinema americanum-group complex (Nematoda: Longidoridae) as inferred from morphometrics and molecular markers</mods:title>
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<mods:namePart id="E7ECBA16C58E8745E921D774B4EDC91B">Archidona-Yuste, Antonio</mods:namePart>
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<mods:name id="87DA5180DB93D3745B6AE9905A04F5B9" type="personal">
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<mods:namePart id="E5D57117CE98103D5F87E9A233D2742F">Navas-Cortés, Juan A.</mods:namePart>
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</mods:name>
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<mods:name id="811D0483A302F324D04E44EDBA699E20" type="personal">
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</mods:role>
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<mods:namePart id="748826A1DF95C70E27BA111DC02E859E">Cantalapiedra-Navarrete, Carolina</mods:namePart>
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</mods:name>
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<mods:name id="FBD373701F00AB722511D8CE0F22B005" type="personal">
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</mods:role>
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<mods:namePart id="4CFEBD13BA79CB2850E9378103622C95">Palomares-Rius, Juan E.</mods:namePart>
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<mods:namePart id="6F87E93B481A6EB04FB4991B2293E7D0">Castillo, Pablo</mods:namePart>
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<mods:typeOfResource id="628EBB0F836EE27A7D7C6EFA17F89C41">text</mods:typeOfResource>
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<mods:title id="DBC423CAD1C2B243FBC41B78C6CEBB7A">Zoological Journal of the Linnean Society</mods:title>
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<mods:part id="2BEF513D67B25D015150175E4CE266E9">
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<mods:date id="4BF024AC5845432240656720C6A204FA">2016</mods:date>
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<mods:detail id="1BB19DD2CD0B17AC1226C0496AA428A2" type="pubDate">
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<mods:number id="CDA23BC4C7B0C9B3626654FB82350012">2016-02-29</mods:number>
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<mods:number id="C9B56882DCF99A56A172DF600F2F86AA">176</mods:number>
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<mods:number id="FF5009F594A829CFEE26C57012284A49">2</mods:number>
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<mods:url id="B900BE2B2912F383794E4A4CE754ABD9">https://academic.oup.com/zoolinnean/article-lookup/doi/10.1111/zoj.12316</mods:url>
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<mods:classification id="EDB7A3E9598C7B93B29012D2B132738A">journal article</mods:classification>
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<mods:identifier id="535AF2BF816BE538381AA84AB6A5F2DA" type="DOI">10.1111/zoj.12316</mods:identifier>
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<mods:identifier id="311478B2938DEDA9320183BC15688DAC" type="ISSN">0024-4082</mods:identifier>
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<mods:identifier id="0BC17207199592E3FD62636FDDC223A4" type="Zenodo-Dep">5357381</mods:identifier>
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</mods:mods>
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<treatment id="03A06734FFEFFFCD57F9FBC1FC9EF912" LSID="urn:lsid:plazi:treatment:03A06734FFEFFFCD57F9FBC1FC9EF912" httpUri="http://treatment.plazi.org/id/03A06734FFEFFFCD57F9FBC1FC9EF912" lastPageId="7" lastPageNumber="238" pageId="6" pageNumber="237">
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<subSubSection id="C31385A9FFEFFFCC57F9FBC1FD25FBB0" box="[214,688,1106,1127]" pageId="6" pageNumber="237" type="nomenclature">
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<paragraph id="8BB6D622FFEFFFCC57F9FBC1FD25FBB0" blockId="6.[214,688,1106,1160]" box="[214,688,1106,1127]" pageId="6" pageNumber="237">
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<heading id="D0FE614EFFEFFFCC57F9FBC1FD25FBB0" box="[214,688,1106,1127]" centered="true" fontSize="9" level="2" pageId="6" pageNumber="237" reason="4">
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<taxonomicName id="4C09ADA1FFEFFFCC57F9FBC1FDDFFBB1" authority="Archidona-Yuste & Navas-Cortés & Cantalapiedra-Navarrete & Palomares-Rius & Castillo, 2016" authorityName="Archidona-Yuste & Navas-Cortés & Cantalapiedra-Navarrete & Palomares-Rius & Castillo" authorityYear="2016" box="[214,586,1106,1127]" class="Adenophorea" family="Longidoridae" genus="Xiphinema" kingdom="Animalia" order="Dorylaimida" pageId="6" pageNumber="234" phylum="Nematoda" rank="species" species="plesiopachtaicum" status="sp. nov.">XIPHINEMA PLESIOPACHTAICUM</taxonomicName>
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<emphasis id="B97D0A30FFEFFFCC557CFBC6FD25FBB0" bold="true" box="[595,688,1106,1127]" pageId="6" pageNumber="237">
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<taxonomicNameLabel id="A24EB74BFFEFFFCC557CFBC6FD25FBB0" box="[595,688,1106,1127]" pageId="6" pageNumber="237" rank="species">SP. NOV.</taxonomicNameLabel>
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</emphasis>
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection id="C31385A9FFEFFFCD567EFBE1FC9EF912" lastPageId="7" lastPageNumber="238" pageId="6" pageNumber="237" type="description">
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<paragraph id="8BB6D622FFEFFFCC567EFBE1FDA0FB5F" blockId="6.[214,688,1106,1160]" box="[337,565,1138,1160]" pageId="6" pageNumber="237">
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(
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<figureCitation id="1332CAA7FFEFFFCC5676FBE1FE57FB50" box="[345,450,1138,1159]" captionStart-0="Figure 1" captionStart-1="Figure 2" captionStart-2="Figure 3" captionStartId-0="7.[164,243,1530,1549]" captionStartId-1="8.[144,223,1671,1690]" captionStartId-2="9.[164,243,1458,1477]" captionTargetBox-0="[387,1219,194,1501]" captionTargetBox-1="[369,1197,196,1640]" captionTargetBox-2="[387,1219,193,1429]" captionTargetId-0="figure-153@7.[387,1219,194,1501]" captionTargetId-1="figure-54@8.[367,1199,194,1642]" captionTargetId-2="figure-163@9.[387,1219,193,1429]" captionTargetPageId-0="7" captionTargetPageId-1="8" captionTargetPageId-2="9" captionText-0="Figure 1. Line drawings of: A–D, Xiphinema plesiopachtaicum sp. nov.; E–H, Xiphinema vallense sp. nov.; I–L, Xiphinema astaregiense sp. nov. A, E, I, female lip regions. B–D, F, G, J, K, female tail regions. H, L, male tail regions." captionText-1="Figure 2. Line drawings of pharyngeal bulb and anterior genital branch of: A, B, Xiphinema plesiopachtaicum sp. nov.; C, D, Xiphinema vallense sp. nov.; E, F, Xiphinema astaregiense sp. nov." captionText-2="Figure 3. Light micrographs of Xiphinema plesiopachtaicum sp. nov. A, entire female. B, female neck region. C, D, female lip region. E, vulval region. F–K, female tail regions from different specimens showing the morphological variability. Abbreviations: a, anus; gr, guiding ring; V, vulva. Scale bars: A = 100 μm; B–K = 20 μm." figureDoi-0="http://doi.org/10.5281/zenodo.5357383" figureDoi-1="http://doi.org/10.5281/zenodo.5357385" figureDoi-2="http://doi.org/10.5281/zenodo.5357387" httpUri-0="https://zenodo.org/record/5357383/files/figure.png" httpUri-1="https://zenodo.org/record/5357385/files/figure.png" httpUri-2="https://zenodo.org/record/5357387/files/figure.png" pageId="6" pageNumber="237">FIGS 1–3</figureCitation>
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,
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<tableCitation id="C68BE399FFEFFFCC56E0FBE1FDB9FB5F" box="[463,556,1138,1160]" captionStart="Table 2" captionStartId="10.[144,208,197,216]" captionText="Table 2. Morphometrics of Xiphinema plesiopachtaicum sp. nov. from wild olive at Coto Ríos (Jaén, Spain)*" pageId="6" pageNumber="237">TABLE 2</tableCitation>
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)
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</paragraph>
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<paragraph id="8BB6D622FFEFFFCC57BFFB0BFE2CFA74" blockId="6.[144,759,1176,1443]" pageId="6" pageNumber="237">
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<materialsCitation id="3B61DC7FFFEFFFCC57BFFB0BFE2CFA74" collectionCode="IAS, CSIC" collectorName="J. Martin Barbarroja & G. Leon Ropero & Institute & Sustainable Agriculture & Spanish National Research Council & Cordoba" country="Spain" county="Jaen province" latitude="38.036427" location="Female" longLatPrecision="1" longitude="2.9031308" municipality="Coto Rios" pageId="6" pageNumber="237" specimenCount="1" typeStatus="holotype">
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<emphasis id="B97D0A30FFEFFFCC57BFFB0BFF6FFB7A" box="[144,250,1176,1197]" italics="true" pageId="6" pageNumber="237">
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<typeStatus id="54B26880FFEFFFCC57BFFB0BFF61FB7A" box="[144,244,1176,1197]" pageId="6" pageNumber="237" type="holotype">Holotype</typeStatus>
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:
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</emphasis>
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<location id="8ED680F9FFEFFFCC562CFB0BFEC2FB79" LSID="urn:lsid:plazi:treatment:03A06734FFEFFFCD57F9FBC1FC9EF912:8ED680F9FFEFFFCC562CFB0BFEC2FB79" box="[259,343,1176,1198]" country="Spain" county="Jaen province" latitude="38.036427" longLatPrecision="1" longitude="2.9031308" municipality="Coto Rios" name="Female" pageId="6" pageNumber="237">Female</location>
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extracted from soil samples collect- ed from the rhizosphere of wild olive (
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<taxonomicName id="4C09ADA1FFEFFFCC557DFB24FEBBFB3C" class="Magnoliopsida" family="Oleaceae" genus="Olea" kingdom="Plantae" order="Lamiales" pageId="6" pageNumber="237" phylum="Tracheophyta" rank="subSpecies" species="europaea" subSpecies="sylvestris">
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<emphasis id="B97D0A30FFEFFFCC557DFB24FD62FB1A" box="[594,759,1207,1229]" italics="true" pageId="6" pageNumber="237">Olea europaea</emphasis>
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ssp.
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<emphasis id="B97D0A30FFEFFFCC57EAFB45FEBBFB3C" box="[197,302,1238,1259]" italics="true" pageId="6" pageNumber="237">sylvestris</emphasis>
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</taxonomicName>
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) in
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<collectingMunicipality id="6BD24C58FFEFFFCC564FFB45FE47FB3B" box="[352,466,1238,1260]" pageId="6" pageNumber="237">Coto Ríos</collectingMunicipality>
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,
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<collectingCounty id="62D7AEAEFFEFFFCC56F0FB45FD16FB3B" box="[479,643,1238,1260]" pageId="6" pageNumber="237">Jaén province</collectingCounty>
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, southern
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<collectingCountry id="F31E96B2FFEFFFCC57BFFB67FF41FADD" box="[144,212,1268,1290]" name="Spain" pageId="6" pageNumber="237">Spain</collectingCountry>
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(
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<geoCoordinate id="EE3DB0E5FFEFFFCC57C6FB67FE01FADD" box="[233,404,1268,1290]" degrees="38" direction="north" minutes="02" orientation="latitude" pageId="6" pageNumber="237" precision="1" seconds="11.14" value="38.036427">38°02′11.14″N</geoCoordinate>
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,
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<geoCoordinate id="EE3DB0E5FFEFFFCC568AFB67FDAAFADD" box="[421,575,1268,1290]" degrees="2" direction="east" minutes="54" orientation="longitude" pageId="6" pageNumber="237" precision="1" seconds="11.27" value="2.9031308">2°54′11.27″E</geoCoordinate>
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), by
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<collectorName id="26FCB3F4FFEFFFCC55AEFB66FE9FFAFE" pageId="6" pageNumber="237">J. Martín Barbarroja</collectorName>
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and
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<collectorName id="26FCB3F4FFEFFFCC566CFA80FE61FAFF" box="[323,500,1299,1321]" pageId="6" pageNumber="237">G. León Ropero</collectorName>
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, mounted in pure glycerine and deposited in the nematode collection at the
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<collectorName id="26FCB3F4FFEFFFCC57BFFAC3FF61FAB1" box="[144,244,1360,1382]" pageId="6" pageNumber="237">Institute</collectorName>
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for
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<collectorName id="26FCB3F4FFEFFFCC560CFAC3FDA7FAB1" box="[291,562,1360,1382]" pageId="6" pageNumber="237">Sustainable Agriculture</collectorName>
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(
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<collectionCode id="ED184EE7FFEFFFCC556DFAC3FDFBFAB1" box="[578,622,1360,1382]" pageId="6" pageNumber="237">IAS</collectionCode>
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) of
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<collectorName id="26FCB3F4FFEFFFCC55B5FAC3FE2DFA53" pageId="6" pageNumber="237">Spanish National Research Council</collectorName>
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(
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<collectionCode id="ED184EE7FFEFFFCC56E8FAFCFD90FA52" box="[455,517,1391,1413]" pageId="6" pageNumber="237">CSIC</collectionCode>
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),
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<collectorName id="26FCB3F4FFEFFFCC5537FAFDFDE2FA53" box="[536,631,1390,1412]" pageId="6" pageNumber="237">Córdoba</collectorName>
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,
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<collectingCountry id="F31E96B2FFEFFFCC55ADFAFDFD57FA53" box="[642,706,1390,1412]" name="Spain" pageId="6" pageNumber="237">Spain</collectingCountry>
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(collection number AR63-05).
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</materialsCitation>
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</paragraph>
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<paragraph id="8BB6D622FFEFFFCC57BFFA58FF6EF924" blockId="6.[144,759,1482,1779]" pageId="6" pageNumber="237">
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<materialsCitation id="3B61DC7FFFEFFFCC57BFFA58FF62F924" collectionCode="IAS-, CSIC, USDA, MD" country="Spain" county="Female" location="Jaen province" municipality="Coto Rios" pageId="6" pageNumber="237" specimenCode="RIT831" specimenCount="4" specimenCount-female="2" stateProvince="Region de Bruxelles-Capitale" typeStatus="paratype">
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<emphasis id="B97D0A30FFEFFFCC57BFFA58FE95FA37" box="[144,256,1483,1504]" italics="true" pageId="6" pageNumber="237">
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<typeStatus id="54B26880FFEFFFCC57BFFA58FF6FFA37" box="[144,250,1483,1504]" pageId="6" pageNumber="237" type="paratype">Paratypes</typeStatus>
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:
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</emphasis>
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<collectingCounty id="62D7AEAEFFEFFFCC5629FA59FEC3FA37" box="[262,342,1482,1504]" pageId="6" pageNumber="237">Female</collectingCounty>
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and juvenile
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<typeStatus id="54B26880FFEFFFCC56C7FA58FDC7FA37" box="[488,594,1483,1504]" pageId="6" pageNumber="237" type="paratype">paratypes</typeStatus>
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extracted from soil samples collected from the rhizosphere of wild olive at
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<collectingMunicipality id="6BD24C58FFEFFFCC579CF994FEBCF9CA" box="[179,297,1543,1565]" pageId="6" pageNumber="237">Coto Ríos</collectingMunicipality>
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,
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<location id="8ED680F9FFEFFFCC5615F994FE71F9CA" LSID="urn:lsid:plazi:treatment:03A06734FFEFFFCD57F9FBC1FC9EF912:8ED680F9FFEFFFCC5615F994FE71F9CA" box="[314,484,1543,1565]" country="Spain" county="Female" municipality="Coto Rios" name="Jaen province" pageId="6" pageNumber="237" stateProvince="Region de Bruxelles-Capitale">Jaén province</location>
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, southern
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<collectingCountry id="F31E96B2FFEFFFCC5547F994FD3BF9CA" box="[616,686,1543,1565]" name="Spain" pageId="6" pageNumber="237">Spain</collectingCountry>
|
|||
|
|
, were deposited in the following nematode collections:
|
|||
|
|
<collectionCode id="ED184EE7FFEFFFCC55ECF9B5FF58F98D" pageId="6" pageNumber="237">IAS- CSIC</collectionCode>
|
|||
|
|
(collection numbers AR63-01–AR63-02, AR63- 04–AR63-12);
|
|||
|
|
<specimenCount id="9D0F1DABFFEFFFCC5606F9F7FE0AF9AE" box="[297,415,1635,1657]" pageId="6" pageNumber="237" type="female">two female</specimenCount>
|
|||
|
|
<typeStatus id="54B26880FFEFFFCC5689F9F7FD84F9AE" box="[422,529,1636,1657]" pageId="6" pageNumber="237" type="paratype">paratypes</typeStatus>
|
|||
|
|
at the
|
|||
|
|
<location id="8ED680F9FFEFFFCC5570F9F0FD97F94F" LSID="urn:lsid:plazi:treatment:03A06734FFEFFFCD57F9FBC1FC9EF912:8ED680F9FFEFFFCC5570F9F0FD97F94F" country="Spain" county="Female" municipality="Coto Rios" name="Royal Belgian Institute of Natural Sciences" pageId="6" pageNumber="237" stateProvince="Region de Bruxelles-Capitale">Royal Belgian Institute of Natural Sciences</location>
|
|||
|
|
,
|
|||
|
|
<collectingRegion id="49CD18C0FFEFFFCC553BF911FDEAF94F" box="[532,639,1666,1688]" country="Belgium" name="Region de Bruxelles-Capitale" pageId="6" pageNumber="237">Brussels</collectingRegion>
|
|||
|
|
,
|
|||
|
|
<collectingCountry id="F31E96B2FFEFFFCC55BEF911FD63F94F" box="[657,758,1666,1688]" name="Belgium" pageId="6" pageNumber="237">Belgium</collectingCountry>
|
|||
|
|
(
|
|||
|
|
<specimenCode id="DBAF7E59FFEFFFCC57B8F933FF7EF961" box="[151,235,1696,1718]" collectionCode="RIT" pageId="6" pageNumber="237">RIT831</specimenCode>
|
|||
|
|
), and
|
|||
|
|
<specimenCount id="9D0F1DABFFEFFFCC5602F932FE36F961" box="[301,419,1696,1718]" pageId="6" pageNumber="237" type="female">two female</specimenCount>
|
|||
|
|
<typeStatus id="54B26880FFEFFFCC5685F932FD80F961" box="[426,533,1697,1718]" pageId="6" pageNumber="237" type="paratype">paratypes</typeStatus>
|
|||
|
|
at the
|
|||
|
|
<collectionCode id="ED184EE7FFEFFFCC554DF933FD3DF962" box="[610,680,1696,1717]" country="USA" httpUri="http://grbio.org/cool/e3b9-k2i3" name="United States Department of Agriculture" pageId="6" pageNumber="237">USDA</collectionCode>
|
|||
|
|
Nematode Collection, Beltsville,
|
|||
|
|
<collectionCode id="ED184EE7FFEFFFCC5698F92CFE76F903" box="[439,483,1727,1748]" country="Germany" name="Museum Donaueschingen" pageId="6" pageNumber="237">MD</collectionCode>
|
|||
|
|
, USA (collection number T-6285p)
|
|||
|
|
</materialsCitation>
|
|||
|
|
.
|
|||
|
|
</paragraph>
|
|||
|
|
<paragraph id="8BB6D622FFEFFFCC57BFF889FA8BFB79" blockId="6.[144,759,1818,1902]" lastBlockId="6.[806,1422,197,1198]" pageId="6" pageNumber="237">
|
|||
|
|
<emphasis id="B97D0A30FFEFFFCC57BFF889FE98F8F8" box="[144,269,1818,1839]" italics="true" pageId="6" pageNumber="237">Etymology:</emphasis>
|
|||
|
|
The species epithet refers to a compound name from the Greek word
|
|||
|
|
<emphasis id="B97D0A30FFEFFFCC5529F8AAFDCCF899" box="[518,601,1849,1870]" italics="true" pageId="6" pageNumber="237">plesios</emphasis>
|
|||
|
|
= near, and
|
|||
|
|
<taxonomicName id="4C09ADA1FFEFFFCC57BFF8CBFE9AF8BA" authorityName="Kirjanova" authorityYear="1951" baseAuthorityName="Tulaganov" baseAuthorityYear="1938" box="[144,271,1880,1901]" class="Adenophorea" family="Longidoridae" genus="Xiphinema" kingdom="Animalia" order="Dorylaimida" pageId="6" pageNumber="237" phylum="Nematoda" rank="species" species="pachtaicum">
|
|||
|
|
<emphasis id="B97D0A30FFEFFFCC57BFF8CBFE9AF8BA" box="[144,271,1880,1901]" italics="true" pageId="6" pageNumber="237">pachtaicum</emphasis>
|
|||
|
|
</taxonomicName>
|
|||
|
|
, the closest species of the genus
|
|||
|
|
<taxonomicName id="4C09ADA1FFEFFFCC5557F8CBFD65F8BA" authorityName="COBB" authorityYear="1913" box="[632,752,1880,1901]" class="Adenophorea" family="Longidoridae" genus="Xiphinema" kingdom="Animalia" order="Dorylaimida" pageId="6" pageNumber="237" phylum="Nematoda" rank="genus">
|
|||
|
|
<emphasis id="B97D0A30FFEFFFCC5557F8CBFD65F8BA" box="[632,752,1880,1901]" italics="true" pageId="6" pageNumber="237">Xiphinema</emphasis>
|
|||
|
|
</taxonomicName>
|
|||
|
|
.
|
|||
|
|
<emphasis id="B97D0A30FFEFFFCC5409FF56FBB4FF0D" box="[806,1057,197,218]" italics="true" pageId="6" pageNumber="237">Description of female:</emphasis>
|
|||
|
|
Body medium-sized, forming a close C-shaped to open spiral when killed by heat. Body tapering very gradually towards the extremities. Cuticle smooth, finely striated transversely, 2.0 ± 0.2 (1.5– 2.5) μm thick along body but thicker at tail tip (
|
|||
|
|
<tableCitation id="C68BE399FFEFFFCC5202FEACFA14FE82" box="[1325,1409,319,341]" captionStart="Table 2" captionStartId="10.[144,208,197,216]" captionText="Table 2. Morphometrics of Xiphinema plesiopachtaicum sp. nov. from wild olive at Coto Ríos (Jaén, Spain)*" pageId="6" pageNumber="237">Table 2</tableCitation>
|
|||
|
|
). Lip region flatly rounded, expanded, separated from rest of body by constriction, 9.5 ± 0.4 (8.5–10.5) μm wide. Amphidial fovea funnel-shaped, with slit-like aperture at constriction level, 6.6 ± 0.2 (6.5–7.0) μm wide. Pharynx consisting of an anterior slender narrow part, 238– 350 μm long, extending to a terminal pharyngeal basal bulb well demarcated anteriorly, cylindrical, 73.4 ± 5.1 (63–84) μm long, 14.1 ± 1.1 (11.5–15.5) μm wide, occupying about one fifth to one third of the total pharyngeal length. Glandularium 65.0 ± 5.1 (56–78) μm long. Dorsal pharyngeal nucleus (DN) in anterior part of the bulb 12.4 ± 2.0 (10.4–16.0) % of basal bulb length, and subventrolateral nuclei (SVN) located around midbulb 53.3 ± 4.4 (49.5–61.7) % of basal bulb length (location of gland nuclei according to
|
|||
|
|
<bibRefCitation id="EF98ABD3FFEFFFCC53EBFC99FCCAFCE9" author="Loof PAA & Coomans A" pageId="6" pageNumber="237" pagination="213 - 233" refId="ref24228" refString="Loof PAA, Coomans A. 1972. The oesophageal gland nuclei of Longidoridae (Dorylaimida). Nematologica 21: 213 - 233." type="journal article" year="1972">Loof & Coomans, 1972</bibRefCitation>
|
|||
|
|
;
|
|||
|
|
<figureCitation id="1332CAA7FFEFFFCC5445FCBAFC38FCE8" box="[874,941,809,831]" captionStart="Figure 2" captionStartId="8.[144,223,1671,1690]" captionTargetBox="[369,1197,196,1640]" captionTargetId="figure-54@8.[367,1199,194,1642]" captionTargetPageId="8" captionText="Figure 2. Line drawings of pharyngeal bulb and anterior genital branch of: A, B, Xiphinema plesiopachtaicum sp. nov.; C, D, Xiphinema vallense sp. nov.; E, F, Xiphinema astaregiense sp. nov." figureDoi="http://doi.org/10.5281/zenodo.5357385" httpUri="https://zenodo.org/record/5357385/files/figure.png" pageId="6" pageNumber="237">Fig. 2</figureCitation>
|
|||
|
|
). Reproductive system amphidelphic, both branches equally developed; ovaries reflexed with symbiontic bacteria; uteri rather short (
|
|||
|
|
<emphasis id="B97D0A30FFEFFFCC53CCFCF5FB60FCAC" box="[1251,1269,870,891]" italics="true" pageId="6" pageNumber="237">c.</emphasis>
|
|||
|
|
138 μm long) without any differentiation. Vulva postequatorial, transverse slit-like; vagina 11.3 ± 1.8 (9.0–15.0) μm long with short distal part and well developed proximally (
|
|||
|
|
<figureCitation id="1332CAA7FFEFFFCC5210FC51FA14FC0F" box="[1343,1409,962,984]" captionStart="Figure 2" captionStartId="8.[144,223,1671,1690]" captionTargetBox="[369,1197,196,1640]" captionTargetId="figure-54@8.[367,1199,194,1642]" captionTargetPageId="8" captionText="Figure 2. Line drawings of pharyngeal bulb and anterior genital branch of: A, B, Xiphinema plesiopachtaicum sp. nov.; C, D, Xiphinema vallense sp. nov.; E, F, Xiphinema astaregiense sp. nov." figureDoi="http://doi.org/10.5281/zenodo.5357385" httpUri="https://zenodo.org/record/5357385/files/figure.png" pageId="6" pageNumber="237">Fig. 2</figureCitation>
|
|||
|
|
). Prerectum 449.0 ± 53.7 (411.0–487.0) μm long. Rectum 16.7 ± 3.4 (13.5–25.0) μm long. Tail short, but longer than anal body diameter (c′ = 1.3–1.7), dorsally convexconoid, with pointed tip, and often with dorsal and occasionally dorsoventral depression at hyaline region level; two pairs of caudal pores present (
|
|||
|
|
<figureCitation id="1332CAA7FFEFFFCC5228FBEAFADFFB58" box="[1287,1354,1145,1167]" captionStart="Figure 2" captionStartId="8.[144,223,1671,1690]" captionTargetBox="[369,1197,196,1640]" captionTargetId="figure-54@8.[367,1199,194,1642]" captionTargetPageId="8" captionText="Figure 2. Line drawings of pharyngeal bulb and anterior genital branch of: A, B, Xiphinema plesiopachtaicum sp. nov.; C, D, Xiphinema vallense sp. nov.; E, F, Xiphinema astaregiense sp. nov." figureDoi="http://doi.org/10.5281/zenodo.5357385" httpUri="https://zenodo.org/record/5357385/files/figure.png" pageId="6" pageNumber="237">Fig. 2</figureCitation>
|
|||
|
|
). Tail hyaline region 7.6 ± 1.3 (5.5–10.0) μm long.
|
|||
|
|
</paragraph>
|
|||
|
|
<paragraph id="8BB6D622FFEFFFCC5409FB46FB9FFB3C" blockId="6.[806,1034,1237,1259]" box="[806,1034,1237,1259]" pageId="6" pageNumber="237">
|
|||
|
|
<emphasis id="B97D0A30FFEFFFCC5409FB46FCF3FB3D" box="[806,870,1237,1258]" italics="true" pageId="6" pageNumber="237">Male:</emphasis>
|
|||
|
|
Not detected.
|
|||
|
|
</paragraph>
|
|||
|
|
<paragraph id="8BB6D622FFEFFFCC5409FA80FB20FA75" blockId="6.[806,1422,1298,1443]" pageId="6" pageNumber="237">
|
|||
|
|
<emphasis id="B97D0A30FFEFFFCC5409FA80FBAFFAF0" box="[806,1082,1298,1320]" italics="true" pageId="6" pageNumber="237">Description of juveniles:</emphasis>
|
|||
|
|
Only
|
|||
|
|
<specimenCount id="9D0F1DABFFEFFFCC53AAFA80FA84FAFF" box="[1157,1297,1298,1320]" pageId="6" pageNumber="237" type="juvenile">one juvenile</specimenCount>
|
|||
|
|
stage was detected (fourth stage), which was morphologically similar to the female but from which juveniles differ by their size, longer and more tapering tails, and development of reproductive system.
|
|||
|
|
</paragraph>
|
|||
|
|
<paragraph id="8BB6D622FFEFFFCC5409FA59FA1BF8BA" blockId="6.[806,1422,1482,1901]" pageId="6" pageNumber="237">
|
|||
|
|
<emphasis id="B97D0A30FFEFFFCC5409FA59FB60FA08" box="[806,1269,1482,1503]" italics="true" pageId="6" pageNumber="237">
|
|||
|
|
Diagnosis:
|
|||
|
|
<taxonomicName id="4C09ADA1FFEFFFCC5487FA59FB60FA08" authority="Archidona-Yuste & Navas-Cortés & Cantalapiedra-Navarrete & Palomares-Rius & Castillo, 2016" authorityName="Archidona-Yuste & Navas-Cortés & Cantalapiedra-Navarrete & Palomares-Rius & Castillo" authorityYear="2016" box="[936,1269,1482,1503]" class="Adenophorea" family="Longidoridae" genus="Xiphinema" kingdom="Animalia" order="Dorylaimida" pageId="6" pageNumber="237" phylum="Nematoda" rank="species" species="plesiopachtaicum" status="sp. nov.">Xiphinema plesiopachtaicum</taxonomicName>
|
|||
|
|
</emphasis>
|
|||
|
|
<taxonomicNameLabel id="A24EB74BFFEFFFCC53D0FA59FACDFA08" box="[1279,1368,1482,1503]" pageId="6" pageNumber="237" rank="species">sp. nov.</taxonomicNameLabel>
|
|||
|
|
is a parthenogenetic species characterized by a medium body size (1520–2078 μm); lip region flatly rounded, separated from the rest of the body by constriction; odontostyle and odontophore 83 and 48 μm long, respectively; V = 55–60%; female tail short (23.5– 28.5 μm), dorsally convex-conoid, with pointed tip, and often with dorsal and occasionally dorsoventral depression at hyaline region level; c ratio of 62.5–88.7), c′ ratio of 1.3–1.7; and specific D2-D3 and ITS1- rRNA sequences deposited in GenBank with accession numbers
|
|||
|
|
<accessionNumber id="945A4BC1FFEFFFCC54E0F889FBD2F8E7" box="[975,1095,1818,1840]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/KP268956" pageId="6" pageNumber="237">KP268956</accessionNumber>
|
|||
|
|
–
|
|||
|
|
<accessionNumber id="945A4BC1FFEFFFCC537AF889FB5EF8E7" box="[1109,1227,1818,1840]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/KP268958" pageId="6" pageNumber="237">KP268958</accessionNumber>
|
|||
|
|
, and
|
|||
|
|
<accessionNumber id="945A4BC1FFEFFFCC523FF889FA1DF8E7" box="[1296,1416,1818,1840]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/KP268973" pageId="6" pageNumber="237">KP268973</accessionNumber>
|
|||
|
|
, respectively. Morphologically and morphometrically,
|
|||
|
|
<taxonomicName id="4C09ADA1FFEFFFCC5409F8CBFB92F8BB" authority="Archidona-Yuste & Navas-Cortés & Cantalapiedra-Navarrete & Palomares-Rius & Castillo, 2016" authorityName="Archidona-Yuste & Navas-Cortés & Cantalapiedra-Navarrete & Palomares-Rius & Castillo" authorityYear="2016" box="[806,1031,1879,1901]" class="Adenophorea" family="Longidoridae" genus="Xiphinema" kingdom="Animalia" order="Dorylaimida" pageId="6" pageNumber="237" phylum="Nematoda" rank="species" species="plesiopachtaicum" status="sp. nov.">
|
|||
|
|
<emphasis id="B97D0A30FFEFFFCC5409F8CBFB92F8BB" box="[806,1031,1879,1901]" italics="true" pageId="6" pageNumber="237">X. plesiopachtaicum</emphasis>
|
|||
|
|
</taxonomicName>
|
|||
|
|
<taxonomicNameLabel id="A24EB74BFFEFFFCC5321F8CBFBF7F8BA" box="[1038,1122,1880,1901]" pageId="6" pageNumber="237" rank="species">sp. nov.</taxonomicNameLabel>
|
|||
|
|
can be distinguished from
|
|||
|
|
</paragraph>
|
|||
|
|
<paragraph id="8BB6D622FFEEFFCD5789FF10FDFFFF4D" blockId="7.[166,618,131,155]" box="[166,618,131,155]" pageId="7" pageNumber="238">
|
|||
|
|
238 A. ARCHIDONA-YUSTE
|
|||
|
|
<emphasis id="B97D0A30FFEEFFCD5536FF16FDF6FF4D" box="[537,611,133,154]" italics="true" pageId="7" pageNumber="238">ET AL</emphasis>
|
|||
|
|
.
|
|||
|
|
</paragraph>
|
|||
|
|
<caption id="DF7686AAFFEEFFCD578BFA69FA37F9FC" ID-DOI="http://doi.org/10.5281/zenodo.5357383" ID-Zenodo-Dep="5357383" httpUri="https://zenodo.org/record/5357383/files/figure.png" pageId="7" pageNumber="238" startId="7.[164,243,1530,1549]" targetBox="[387,1219,194,1501]" targetPageId="7">
|
|||
|
|
<paragraph id="8BB6D622FFEEFFCD578BFA69FA37F9FC" blockId="7.[164,1442,1530,1579]" pageId="7" pageNumber="238">
|
|||
|
|
<emphasis id="B97D0A30FFEEFFCD578BFA69FE99F9DA" bold="true" box="[164,268,1530,1549]" pageId="7" pageNumber="238">Figure 1.</emphasis>
|
|||
|
|
Line drawings of: A–D,
|
|||
|
|
<emphasis id="B97D0A30FFEEFFCD5538FA69FC45F9D9" bold="true" box="[535,976,1530,1550]" pageId="7" pageNumber="238">
|
|||
|
|
<taxonomicName id="4C09ADA1FFEEFFCD5538FA69FCFAF9DA" authority="Archidona-Yuste & Navas-Cortés & Cantalapiedra-Navarrete & Palomares-Rius & Castillo, 2016" authorityName="Archidona-Yuste & Navas-Cortés & Cantalapiedra-Navarrete & Palomares-Rius & Castillo" authorityYear="2016" box="[535,879,1530,1549]" class="Adenophorea" family="Longidoridae" genus="Xiphinema" kingdom="Animalia" order="Dorylaimida" pageId="7" pageNumber="238" phylum="Nematoda" rank="species" species="plesiopachtaicum" status="sp. nov.">
|
|||
|
|
<emphasis id="B97D0A30FFEEFFCD5538FA69FCFAF9DA" bold="true" box="[535,879,1530,1549]" italics="true" pageId="7" pageNumber="238">Xiphinema plesiopachtaicum</emphasis>
|
|||
|
|
</taxonomicName>
|
|||
|
|
<taxonomicNameLabel id="A24EB74BFFEEFFCD5457FA68FC45F9D9" box="[888,976,1531,1550]" pageId="7" pageNumber="238" rank="species">sp. nov.</taxonomicNameLabel>
|
|||
|
|
</emphasis>
|
|||
|
|
; E–H,
|
|||
|
|
<emphasis id="B97D0A30FFEEFFCD5331FA69FAF2F9D9" bold="true" box="[1054,1383,1530,1550]" pageId="7" pageNumber="238">
|
|||
|
|
<taxonomicName id="4C09ADA1FFEEFFCD5331FA69FA93F9DA" authority="Archidona-Yuste & Navas-Cortés & Cantalapiedra-Navarrete & Palomares-Rius & Castillo, 2016" authorityName="Archidona-Yuste & Navas-Cortés & Cantalapiedra-Navarrete & Palomares-Rius & Castillo" authorityYear="2016" box="[1054,1286,1530,1549]" class="Adenophorea" family="Longidoridae" genus="Xiphinema" kingdom="Animalia" order="Dorylaimida" pageId="7" pageNumber="238" phylum="Nematoda" rank="species" species="vallense" status="sp. nov.">
|
|||
|
|
<emphasis id="B97D0A30FFEEFFCD5331FA69FA93F9DA" bold="true" box="[1054,1286,1530,1549]" italics="true" pageId="7" pageNumber="238">Xiphinema vallense</emphasis>
|
|||
|
|
</taxonomicName>
|
|||
|
|
<taxonomicNameLabel id="A24EB74BFFEEFFCD5220FA68FAF2F9D9" box="[1295,1383,1531,1550]" pageId="7" pageNumber="238" rank="species">sp. nov.</taxonomicNameLabel>
|
|||
|
|
</emphasis>
|
|||
|
|
; I–L,
|
|||
|
|
<emphasis id="B97D0A30FFEEFFCD578BF984FD82F9FC" bold="true" box="[164,535,1559,1579]" pageId="7" pageNumber="238">
|
|||
|
|
<taxonomicName id="4C09ADA1FFEEFFCD578BF984FE2FF9FC" authority="Archidona-Yuste & Navas-Cortés & Cantalapiedra-Navarrete & Palomares-Rius & Castillo, 2016" authorityName="Archidona-Yuste & Navas-Cortés & Cantalapiedra-Navarrete & Palomares-Rius & Castillo" authorityYear="2016" box="[164,442,1559,1579]" class="Adenophorea" family="Longidoridae" genus="Xiphinema" kingdom="Animalia" order="Dorylaimida" pageId="7" pageNumber="238" phylum="Nematoda" rank="species" species="astaregiense" status="sp. nov.">
|
|||
|
|
<emphasis id="B97D0A30FFEEFFCD578BF984FE2FF9FC" bold="true" box="[164,442,1559,1579]" italics="true" pageId="7" pageNumber="238">Xiphinema astaregiense</emphasis>
|
|||
|
|
</taxonomicName>
|
|||
|
|
<taxonomicNameLabel id="A24EB74BFFEEFFCD56EEF98BFD82F9FC" box="[449,535,1560,1579]" pageId="7" pageNumber="238" rank="species">sp. nov.</taxonomicNameLabel>
|
|||
|
|
</emphasis>
|
|||
|
|
A, E, I, female lip regions. B–D, F, G, J, K, female tail regions. H, L, male tail regions.
|
|||
|
|
</paragraph>
|
|||
|
|
</caption>
|
|||
|
|
<paragraph id="8BB6D622FFEEFFCD578BF9C0FC9EF912" blockId="7.[164,779,1619,1733]" pageId="7" pageNumber="238">
|
|||
|
|
the most similar species by a number of particular characteristics from its specific alphanumeric codes (exceptions are in parentheses): A 3(2), B 3, C 2(3), D 2, E 2, F2, G 2, H 1, I 1(2)
|
|||
|
|
<emphasis id="B97D0A30FFEEFFCD56EDF923FD94F912" box="[450,513,1712,1733]" italics="true" pageId="7" pageNumber="238">sensu</emphasis>
|
|||
|
|
<bibRefCitation id="EF98ABD3FFEEFFCD5525F93CFC92F912" author="Lamberti F & Hockland S & Agostinelli A & Moens M & Brown DJF" box="[522,775,1711,1733]" pageId="7" pageNumber="238" pagination="53 - 56" refId="ref23965" refString="Lamberti F, Hockland S, Agostinelli A, Moens M, Brown DJF. 2004. The Xiphinema americanum group. III. Keys to species identification. Nematologia Mediterranea 32: 53 - 56." type="journal article" year="2004">
|
|||
|
|
Lamberti
|
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<emphasis id="B97D0A30FFEEFFCD5553F923FD38F913" box="[636,685,1711,1733]" italics="true" pageId="7" pageNumber="238">et al</emphasis>
|
|||
|
|
. (2004)
|
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|
|
</bibRefCitation>
|
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|
|
.
|
|||
|
|
</paragraph>
|
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|
|
</subSubSection>
|
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|
|
</treatment>
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|
|
</document>
|