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<document id="F383D10221F0AB75D865EE93AC4E184A" ID-DOI="10.1099/ijsem.0.004107" ID-ISSN="1466-5034" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.taxonomicNames_approvedBy="felipe" checkinTime="1644597203828" checkinUser="felipe" docAuthor="Zheng, Jinshui, Wittouck, Stijn, Salvetti, Elisa, Franz, Charles M. A. P., Harris, Hugh M. B., Mattarelli, Paola, O’Toole, Paul W., Pot, Bruno, Vandamme, Peter, Walter, Jens, Watanabe, Koichi, Wuyts, Sander, Felis, Giovanna E., Gänzle, Michael G. & Lebeer, Sarah" docDate="2020" docId="0389878AFFB2214EDA0BFC06FA8867A5" docLanguage="en" docName="IntJSystEvolMicrobiol.70.4.2782-2858.pdf" docOrigin="International Journal of Systematic and Evolutionary Microbiology 70 (4)" docSource="http://dx.doi.org/10.1099/ijsem.0.004107" docStyle="DocumentStyle:C64F0A4F4C66F6FC2AD4ED89351C6242.3:IntJSystEvolMicrobiol.2017-.journal_article" docStyleId="C64F0A4F4C66F6FC2AD4ED89351C6242" docStyleName="IntJSystEvolMicrobiol.2017-.journal_article" docStyleVersion="3" docTitle="Lentilactobacillus otakiensis Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O’Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Gänzle & Lebeer, 2020, COMB. NOV." docType="treatment" docVersion="4" lastPageNumber="2845" masterDocId="FFB0FFF2FF8D2171D937FF96FFAF6267" masterDocTitle="A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae" masterLastPageNumber="2858" masterPageNumber="2782" pageNumber="2845" updateTime="1699295455673" updateUser="plazi">
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<mods:title id="850203D478325CF2562BD8A00FC3679B">A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae</mods:title>
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<mods:namePart id="4D4E2992C939517F653A98498B7AD353">Zheng, Jinshui</mods:namePart>
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<mods:namePart id="743237DF52D497E08443804EC440269D">Wittouck, Stijn</mods:namePart>
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<mods:namePart id="F1EAB90CF9A25C0B10E5B69C4593EB4A">Salvetti, Elisa</mods:namePart>
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<mods:namePart id="055B13B092004573A9D8858CBA0D326D">Franz, Charles M. A. P.</mods:namePart>
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<mods:namePart id="068CF8004B59D4F8678E04D879D4A6EE">Harris, Hugh M. B.</mods:namePart>
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<mods:namePart id="A23182252C7BFFCB0DD4C7963A0BAD0F">Mattarelli, Paola</mods:namePart>
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<mods:namePart id="FE28919D20EA875CB6740F365D470EF5">O’Toole, Paul W.</mods:namePart>
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<mods:namePart id="46FDD590172C8E4274D9037664FEB637">Pot, Bruno</mods:namePart>
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<mods:namePart id="266C0E2CB023EA2572AE6F6003FBF262">Vandamme, Peter</mods:namePart>
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<mods:namePart id="E7FCAE51DC528D5E3D711BAA9F45E7C8">Watanabe, Koichi</mods:namePart>
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<mods:namePart id="78121D7A44E636986CAF0D5E6BCE6ED6">Wuyts, Sander</mods:namePart>
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<mods:namePart id="46B086455087C76C2848F657FBFB8E89">Felis, Giovanna E.</mods:namePart>
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<mods:namePart id="3C1D1140349C389341AB13BC10EAFD61">Gänzle, Michael G.</mods:namePart>
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<mods:namePart id="A1D9D91DD9CFA252395B9CD840BA1016">Lebeer, Sarah</mods:namePart>
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<mods:title id="F8249F0A8262B964AA8523196FFADB1B">International Journal of Systematic and Evolutionary Microbiology</mods:title>
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<mods:part id="CB70C4EB78F45F93D6B5FB6F47DFA063">
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<mods:date id="57965371D9F57B411EAC474EB9AA318F">2020</mods:date>
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<mods:number id="B47DB409017B08EA2FAB7708EC21E130">2020-04-01</mods:number>
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<mods:number id="6922974B037D694D40439243A6F9CEE5">4</mods:number>
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<treatment id="0389878AFFB2214EDA0BFC06FA8867A5" ID-DOI="http://doi.org/10.5281/zenodo.6310112" ID-Zenodo-Dep="6310112" LSID="urn:lsid:plazi:treatment:0389878AFFB2214EDA0BFC06FA8867A5" httpUri="http://treatment.plazi.org/id/0389878AFFB2214EDA0BFC06FA8867A5" lastPageNumber="2845" pageId="63" pageNumber="2845">
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<subSubSection id="C33A6517FFB2214EDA0BFC06FB3E61B4" pageId="63" pageNumber="2845" type="nomenclature">
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<paragraph id="8B9F369CFFB2214EDA0BFC06FB3E61B4" blockId="63.[828,1473,912,1475]" pageId="63" pageNumber="2845">
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<heading id="D0D781F0FFB2214EDA0BFC06FB3E61B4" allCaps="true" bold="true" fontSize="12" level="2" pageId="63" pageNumber="2845" reason="3">
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<emphasis id="B954EA8EFFB2214EDA0BFC06FB3E61B4" bold="true" pageId="63" pageNumber="2845">
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DESCRIPTION OF
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<taxonomicName id="4C204D1FFFB2214EDD02FC06FC4B61B4" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" class="Bacilli" family="Lactobacillaceae" genus="Lentilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="63" pageNumber="2845" phylum="Firmicutes" rank="species" species="otakiensis" status="comb. nov.">
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<emphasis id="B954EA8EFFB2214EDD02FC06FC4B61B4" bold="true" italics="true" pageId="63" pageNumber="2845">LENTILACTOBACILLUS OTAKIENSIS</emphasis>
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</taxonomicName>
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<taxonomicNameLabel id="A26757F5FFB2214EDADBFC20FB3E61B4" box="[1004,1169,950,979]" pageId="63" pageNumber="2845" rank="species">COMB. NOV.</taxonomicNameLabel>
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</emphasis>
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection id="C33A6517FFB2214EDA0BFC49FBEA6652" pageId="63" pageNumber="2845" type="etymology">
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<paragraph id="8B9F369CFFB2214EDA0BFC49FBEA6652" blockId="63.[828,1473,912,1475]" pageId="63" pageNumber="2845">
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<taxonomicName id="4C204D1FFFB2214EDA0BFC49FBC66190" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" box="[828,1129,991,1015]" class="Bacilli" family="Lactobacillaceae" genus="Lentilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="63" pageNumber="2845" phylum="Firmicutes" rank="species" species="otakiensis">
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<emphasis id="B954EA8EFFB2214EDA0BFC49FBC66190" box="[828,1129,991,1015]" italics="true" pageId="63" pageNumber="2845">Lentilactobacillus otakiensis</emphasis>
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</taxonomicName>
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(o.ta.ki.en’sis. N.L. masc. adj.
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<taxonomicName id="4C204D1FFFB2214EDA0BFC68FC0C6671" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" box="[828,931,1022,1046]" class="Bacilli" family="Lactobacillaceae" genus="Lentilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="63" pageNumber="2845" phylum="Firmicutes" rank="species" species="otakiensis">
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<emphasis id="B954EA8EFFB2214EDA0BFC68FC0C6671" box="[828,931,1022,1046]" italics="true" pageId="63" pageNumber="2845">otakiensis</emphasis>
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</taxonomicName>
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from Otaki, the village in
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<collectingCountry id="F337760CFFB2214EDDFFFC69FAA96671" box="[1224,1286,1023,1046]" name="Japan" pageId="63" pageNumber="2845">Japan</collectingCountry>
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, from where the
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<typeStatus id="549B883EFFB2214EDA09FB8BFCC36652" box="[830,876,1053,1077]" pageId="63" pageNumber="2845">type</typeStatus>
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strain was isolated).
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</paragraph>
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</subSubSection>
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<subSubSection id="C33A6517FFB2214EDA0BFBDDFCDB677D" pageId="63" pageNumber="2845" type="description">
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<paragraph id="8B9F369CFFB2214EDA0BFBDDFA146630" blockId="63.[828,1473,912,1475]" box="[828,1467,1097,1123]" pageId="63" pageNumber="2845">
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Basonym:
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<taxonomicName id="4C204D1FFFB2214EDA9EFBDDFAD76604" authority="Watanabe et al. 2009" authorityName="Watanabe" authorityYear="2009" box="[937,1400,1099,1123]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="63" pageNumber="2845" phylum="Firmicutes" rank="species" species="otakiensis">
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<emphasis id="B954EA8EFFB2214EDA9EFBDDFB346604" box="[937,1179,1099,1123]" italics="true" pageId="63" pageNumber="2845">Lactobacillus otakiensis</emphasis>
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Watanabe
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<emphasis id="B954EA8EFFB2214EDC3AFBDDFA906604" box="[1293,1343,1099,1123]" italics="true" pageId="63" pageNumber="2845">et al.</emphasis>
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2009
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</taxonomicName>
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, 758
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|
|
<superScript id="7C559BD4FFB2214EDC90FBDFFA146630" attach="none" box="[1447,1467,1097,1111]" fontSize="6" pageId="63" pageNumber="2845">VP</superScript>
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|||
|
|
</paragraph>
|
|||
|
|
<paragraph id="8B9F369CFFB2214EDA0BFBEEFB4D66A9" blockId="63.[828,1473,912,1475]" pageId="63" pageNumber="2845">
|
|||
|
|
Physiological characteristics and origin are similar to
|
|||
|
|
<taxonomicName id="4C204D1FFFB2214EDC54FBEFFCC166C8" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="63" pageNumber="2845" phylum="Firmicutes" rank="species" species="kisonensis">
|
|||
|
|
<emphasis id="B954EA8EFFB2214EDC54FBEFFCC166C8" italics="true" pageId="63" pageNumber="2845">L. kisonensis</emphasis>
|
|||
|
|
</taxonomicName>
|
|||
|
|
[
|
|||
|
|
<bibRefCitation id="EFB14B6DFFB2214EDA4BFB01FC0666C8" author="Watanabe K & Fujimoto J & Tomii Y & Sasamoto M & Makino H" box="[892,937,1175,1199]" pageId="63" pageNumber="2845" pagination="754 - 760" refId="ref74380" refString="333. Watanabe K, Fujimoto J, Tomii Y, Sasamoto M, Makino H et al. Lactobacillus kisonensis sp. nov., Lactobacillus otakiensis sp. nov., Lactobacillus rapi sp. nov. and Lactobacillus sunkii sp. nov., heterofermentative species isolated from sunki, a traditional Japanese pickle. Int J Syst Evol Microbiol 2009; 59: 754 - 760." type="journal article" year="2009">333</bibRefCitation>
|
|||
|
|
]. The genome size of the
|
|||
|
|
<typeStatus id="549B883EFFB2214EDD8BFB0EFB4566D7" box="[1212,1258,1176,1200]" pageId="63" pageNumber="2845">type</typeStatus>
|
|||
|
|
strain is 2.35 Mbp. The mol% G+C content of DNA is 42.4.
|
|||
|
|
</paragraph>
|
|||
|
|
<paragraph id="8B9F369CFFB2214EDA0BFB75FCDB677D" blockId="63.[828,1473,912,1475]" pageId="63" pageNumber="2845">Isolated from sunki, a fermented turnip product and from kefir.</paragraph>
|
|||
|
|
</subSubSection>
|
|||
|
|
<subSubSection id="C33A6517FFB2214EDA0BFAA6FBB46701" pageId="63" pageNumber="2845" type="materials_examined">
|
|||
|
|
<paragraph id="8B9F369CFFB2214EDA0BFAA6FBB46701" blockId="63.[828,1473,912,1475]" pageId="63" pageNumber="2845">
|
|||
|
|
<materialsCitation id="3B483CC1FFB2214EDA0BFAA6FBBA673C" accessionNumber="YIT 11163, DSM 19908, JCM 15040" collectionCode="T, DSM, JCM" pageId="63" pageNumber="2845" specimenCode="NRIC 0742" specimenCount="1" typeStatus="holotype">
|
|||
|
|
The
|
|||
|
|
<typeStatus id="549B883EFFB2214EDA4CFAA6FC05672F" box="[891,938,1328,1352]" pageId="63" pageNumber="2845">type</typeStatus>
|
|||
|
|
strain is YIT 11163
|
|||
|
|
<superScript id="7C559BD4FFB2214EDDF4FAB9FB62675A" attach="none" box="[1219,1229,1327,1341]" fontSize="6" pageId="63" pageNumber="2845">
|
|||
|
|
<collectionCode id="ED31AE59FFB2214EDDF4FAB9FB62675A" box="[1219,1229,1327,1341]" name="Tavera, Department of Geology and Geophysics" pageId="63" pageNumber="2845">T</collectionCode>
|
|||
|
|
</superScript>
|
|||
|
|
=
|
|||
|
|
<collectionCode id="ED31AE59FFB2214EDDECFAA6FABA672F" box="[1243,1301,1328,1352]" country="Germany" httpUri="http://grbio.org/cool/4644-42cg" name="Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH" pageId="63" pageNumber="2845">DSM</collectionCode>
|
|||
|
|
19908
|
|||
|
|
<superScript id="7C559BD4FFB2214EDC59FAB9FAD7675A" attach="right" box="[1390,1400,1327,1341]" fontSize="6" pageId="63" pageNumber="2845">
|
|||
|
|
<collectionCode id="ED31AE59FFB2214EDC59FAB9FAD7675A" box="[1390,1400,1327,1341]" name="Tavera, Department of Geology and Geophysics" pageId="63" pageNumber="2845">T</collectionCode>
|
|||
|
|
</superScript>
|
|||
|
|
=
|
|||
|
|
<collectionCode id="ED31AE59FFB2214EDCB1FAA6FA14672F" box="[1414,1467,1328,1352]" country="Japan" httpUri="http://grbio.org/cool/iyky-md37" name="Japan Collection of Microorganisms" pageId="63" pageNumber="2845">JCM</collectionCode>
|
|||
|
|
15040
|
|||
|
|
<superScript id="7C559BD4FFB2214EDA4BFADBFC29673C" attach="none" box="[892,902,1357,1371]" fontSize="6" pageId="63" pageNumber="2845">
|
|||
|
|
<collectionCode id="ED31AE59FFB2214EDA4BFADBFC29673C" box="[892,902,1357,1371]" name="Tavera, Department of Geology and Geophysics" pageId="63" pageNumber="2845">T</collectionCode>
|
|||
|
|
</superScript>
|
|||
|
|
=
|
|||
|
|
<specimenCode id="DB869EE7FFB2214EDAA4FAD9FBA26700" box="[915,1037,1359,1383]" collectionCode="NRIC" country="Japan" httpUri="http://grbio.org/cool/4kdp-d4vz" name="NODAI Research Institute Culture Collection" pageId="63" pageNumber="2845">NRIC 0742</specimenCode>
|
|||
|
|
<superScript id="7C559BD4FFB2214EDD3AFADBFBBA673C" attach="none" box="[1037,1045,1357,1371]" fontSize="6" pageId="63" pageNumber="2845">
|
|||
|
|
<collectionCode id="ED31AE59FFB2214EDD3AFADBFBBA673C" box="[1037,1045,1357,1371]" name="Tavera, Department of Geology and Geophysics" pageId="63" pageNumber="2845">T</collectionCode>
|
|||
|
|
</superScript>
|
|||
|
|
</materialsCitation>
|
|||
|
|
.
|
|||
|
|
</paragraph>
|
|||
|
|
</subSubSection>
|
|||
|
|
<subSubSection id="C33A6517FFB2214EDA0BFAEBFA2C67F2" box="[828,1411,1404,1429]" pageId="63" pageNumber="2845" type="description">
|
|||
|
|
<paragraph id="8B9F369CFFB2214EDA0BFAEBFA2C67F2" blockId="63.[828,1473,912,1475]" box="[828,1411,1404,1429]" pageId="63" pageNumber="2845">Genome sequence accession number: AZED00000000.</paragraph>
|
|||
|
|
</subSubSection>
|
|||
|
|
<subSubSection id="C33A6517FFB2214EDA0BFA3CFA8867A5" box="[828,1319,1450,1475]" pageId="63" pageNumber="2845" type="materials_examined">
|
|||
|
|
<paragraph id="8B9F369CFFB2214EDA0BFA3CFA8867A5" blockId="63.[828,1473,912,1475]" box="[828,1319,1450,1475]" pageId="63" pageNumber="2845">
|
|||
|
|
16S rRNA gene accession number:
|
|||
|
|
<accessionNumber id="9473AB7FFFB2214EDD86FA3CFA8C67A5" box="[1201,1315,1450,1474]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/AB366386" pageId="63" pageNumber="2845">AB366386</accessionNumber>
|
|||
|
|
.
|
|||
|
|
</paragraph>
|
|||
|
|
</subSubSection>
|
|||
|
|
</treatment>
|
|||
|
|
</document>
|