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<document id="69F65ECEF0BB6B9320287E468EB9EC47" ID-DOI="10.1099/ijsem.0.004107" ID-ISSN="1466-5034" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.taxonomicNames_approvedBy="felipe" checkinTime="1644597203828" checkinUser="felipe" docAuthor="Zheng, Jinshui, Wittouck, Stijn, Salvetti, Elisa, Franz, Charles M. A. P., Harris, Hugh M. B., Mattarelli, Paola, O’Toole, Paul W., Pot, Bruno, Vandamme, Peter, Walter, Jens, Watanabe, Koichi, Wuyts, Sander, Felis, Giovanna E., Gänzle, Michael G. & Lebeer, Sarah" docDate="2020" docId="0389878AFFB2214ED94EFF2EFDCB608B" docLanguage="en" docName="IntJSystEvolMicrobiol.70.4.2782-2858.pdf" docOrigin="International Journal of Systematic and Evolutionary Microbiology 70 (4)" docSource="http://dx.doi.org/10.1099/ijsem.0.004107" docStyle="DocumentStyle:C64F0A4F4C66F6FC2AD4ED89351C6242.3:IntJSystEvolMicrobiol.2017-.journal_article" docStyleId="C64F0A4F4C66F6FC2AD4ED89351C6242" docStyleName="IntJSystEvolMicrobiol.2017-.journal_article" docStyleVersion="3" docTitle="Lentilactobacillus farraginis Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O’Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Gänzle & Lebeer, 2020, COMB. NOV." docType="treatment" docVersion="4" lastPageNumber="2845" masterDocId="FFB0FFF2FF8D2171D937FF96FFAF6267" masterDocTitle="A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae" masterLastPageNumber="2858" masterPageNumber="2782" pageNumber="2845" updateTime="1699295455673" updateUser="plazi">
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<mods:title id="915FB77A4A261BE59BD43083F6ED5972">A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae</mods:title>
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<mods:namePart id="5F11B696F17A035FC2E5B5F356D79E7F">Zheng, Jinshui</mods:namePart>
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<mods:namePart id="944B8BAC6B7C76FC529FC2FB3B9116A0">Wittouck, Stijn</mods:namePart>
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<mods:namePart id="7C9872866D4FAB62FC0482B5C9859EF2">Salvetti, Elisa</mods:namePart>
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<mods:namePart id="FF764FB67B33460AD11C17457F34544C">Franz, Charles M. A. P.</mods:namePart>
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<mods:namePart id="DFD286ED08CECC29BA8E3BD6C8A5C6C5">Harris, Hugh M. B.</mods:namePart>
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<mods:namePart id="E48F06562A86CE97664B6B9033D6BA45">Mattarelli, Paola</mods:namePart>
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<mods:namePart id="6A0306EF57CB52BE2F270D97C631F406">O’Toole, Paul W.</mods:namePart>
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<mods:namePart id="DC7D01E4BE6FF8837D8425FDF2FB9528">Pot, Bruno</mods:namePart>
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<mods:namePart id="9BC35AE8A6F65D2B20ED0BC4B2C78233">Vandamme, Peter</mods:namePart>
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<mods:namePart id="75413BAD7624C7B191B9A0FADBE96B78">Watanabe, Koichi</mods:namePart>
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<mods:namePart id="CDF902A5E82ECB4AC6BF48D471EF5BB5">Wuyts, Sander</mods:namePart>
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<mods:namePart id="9682EDCD3287FA0FA25C3DDE0A3CA9F3">Felis, Giovanna E.</mods:namePart>
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<mods:namePart id="9FA2AFC556FB06F14375CE5F1A9AE3E7">Gänzle, Michael G.</mods:namePart>
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<mods:title id="F4D3E82D50CA24102020D2C95C015C94">International Journal of Systematic and Evolutionary Microbiology</mods:title>
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<mods:date id="8F870EB6C0BDD3BEEE49013960E763A4">2020</mods:date>
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<mods:number id="D111B675E81B9E32DAD94B1676481624">2020-04-01</mods:number>
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<treatment id="0389878AFFB2214ED94EFF2EFDCB608B" ID-DOI="http://doi.org/10.5281/zenodo.6310104" ID-Zenodo-Dep="6310104" LSID="urn:lsid:plazi:treatment:0389878AFFB2214ED94EFF2EFDCB608B" httpUri="http://treatment.plazi.org/id/0389878AFFB2214ED94EFF2EFDCB608B" lastPageNumber="2845" pageId="63" pageNumber="2845">
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<subSubSection id="C33A6517FFB2214ED94EFF2EFE7F629D" pageId="63" pageNumber="2845" type="nomenclature">
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<paragraph id="8B9F369CFFB2214ED94EFF2EFE7F629D" blockId="63.[120,760,184,749]" pageId="63" pageNumber="2845">
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<heading id="D0D781F0FFB2214ED94EFF2EFE7F629D" allCaps="true" bold="true" fontSize="12" level="2" pageId="63" pageNumber="2845" reason="3">
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<emphasis id="B954EA8EFFB2214ED94EFF2EFE7F629D" bold="true" pageId="63" pageNumber="2845">
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DESCRIPTION OF
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<taxonomicName id="4C204D1FFFB2214ED845FF2EFE8C629D" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" class="Bacilli" family="Lactobacillaceae" genus="Lentilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="63" pageNumber="2845" phylum="Firmicutes" rank="species" species="farraginis" status="comb. nov.">
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<emphasis id="B954EA8EFFB2214ED845FF2EFE8C629D" bold="true" italics="true" pageId="63" pageNumber="2845">LENTILACTOBACILLUS FARRAGINIS</emphasis>
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</taxonomicName>
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<taxonomicNameLabel id="A26757F5FFB2214ED81CFF4BFE7F629D" box="[299,464,221,250]" pageId="63" pageNumber="2845" rank="species">COMB. NOV.</taxonomicNameLabel>
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</emphasis>
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection id="C33A6517FFB2214ED94EFE91FD86633A" pageId="63" pageNumber="2845" type="etymology">
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<paragraph id="8B9F369CFFB2214ED94EFE91FD86633A" blockId="63.[120,760,184,749]" pageId="63" pageNumber="2845">
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<taxonomicName id="4C204D1FFFB2214ED94EFE91FE3C6378" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" box="[121,403,263,287]" class="Bacilli" family="Lactobacillaceae" genus="Lentilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="63" pageNumber="2845" phylum="Firmicutes" rank="species" species="farraginis">
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<emphasis id="B954EA8EFFB2214ED94EFE91FE3C6378" box="[121,403,263,287]" italics="true" pageId="63" pageNumber="2845">Lentilactobacillus farraginis</emphasis>
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</taxonomicName>
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(far.ra’gi.nis. L. gen. n.
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<taxonomicName id="4C204D1FFFB2214EDB4BFE91FD716378" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" box="[636,734,263,287]" class="Bacilli" family="Lactobacillaceae" genus="Lentilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="63" pageNumber="2845" phylum="Firmicutes" rank="species" species="farraginis">
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<emphasis id="B954EA8EFFB2214EDB4BFE91FD716378" box="[636,734,263,287]" italics="true" pageId="63" pageNumber="2845">farraginis</emphasis>
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</taxonomicName>
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of mash, referring to soshu mash as an ingredient of the compost from which the
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<typeStatus id="549B883EFFB2214ED815FED3FEFF633A" box="[290,336,325,349]" pageId="63" pageNumber="2845">type</typeStatus>
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strain was isolated).
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</paragraph>
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</subSubSection>
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<subSubSection id="C33A6517FFB2214ED94EFEE5FF626005" pageId="63" pageNumber="2845" type="description">
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<paragraph id="8B9F369CFFB2214ED94EFEE5FF1C63F9" blockId="63.[120,760,184,749]" pageId="63" pageNumber="2845">
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Basonym:
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<taxonomicName id="4C204D1FFFB2214ED9D9FEE5FD5C63EC" authority="Endo and Okada 2007" authorityName="Endo and Okada" authorityYear="2007" box="[238,755,371,395]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="63" pageNumber="2845" phylum="Firmicutes" rank="species" species="farraginis">
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<emphasis id="B954EA8EFFB2214ED9D9FEE5FE4563EC" box="[238,490,371,395]" italics="true" pageId="63" pageNumber="2845">Lactobacillus farraginis</emphasis>
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Endo and Okada 2007
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</taxonomicName>
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, 711
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<superScript id="7C559BD4FFB2214ED9A8FE06FF1C63F9" attach="left" box="[159,179,400,414]" fontSize="6" pageId="63" pageNumber="2845">VP</superScript>
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</paragraph>
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<paragraph id="8B9F369CFFB2214ED94EFE56FD8F6071" blockId="63.[120,760,184,749]" pageId="63" pageNumber="2845">
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Growth is observed at 15 and 45°C and up to pH 9.0 for some strains [
|
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|
|
<bibRefCitation id="EFB14B6DFFB2214ED9FCFE49FF566390" author="Endo A & Okada S." box="[203,249,479,503]" pageId="63" pageNumber="2845" pagination="708 - 712" refId="ref74242" refString="329. Endo A, Okada S. Lactobacillus farraginis sp. nov. and Lactobacillus parafarraginis sp. nov., heterofermentative lactobacilli isolated from a compost of distilled shochu residue. Int J Syst Evol Microbiol 2007; 57: 708 - 712." type="journal article" year="2007">329</bibRefCitation>
|
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|
|
]. The genome size of the
|
|||
|
|
<typeStatus id="549B883EFFB2214ED8C8FE49FD826390" box="[511,557,479,503]" pageId="63" pageNumber="2845">type</typeStatus>
|
|||
|
|
strain is 2.86 Mbp. The mol% G+C content of DNA is 42.1.
|
|||
|
|
</paragraph>
|
|||
|
|
<paragraph id="8B9F369CFFB2214ED94EFDBDFF626005" blockId="63.[120,760,184,749]" pageId="63" pageNumber="2845">Isolated from isolated from a compost of distilled shochu residue.</paragraph>
|
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|
|
</subSubSection>
|
|||
|
|
<subSubSection id="C33A6517FFB2214ED94EFDEEFD4660F7" box="[121,745,631,657]" pageId="63" pageNumber="2845" type="materials_examined">
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|||
|
|
<paragraph id="8B9F369CFFB2214ED94EFDEEFD4660F7" blockId="63.[120,760,184,749]" box="[121,745,631,657]" pageId="63" pageNumber="2845">
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|||
|
|
<materialsCitation id="3B483CC1FFB2214ED94EFDEEFD4C60E2" accessionNumber="DSM 18382, JCM 14108" box="[121,739,631,657]" collectionCode="DSM, T, JCM" pageId="63" pageNumber="2845" specimenCode="NRIC 0676" specimenCount="1" typeStatus="holotype">
|
|||
|
|
The
|
|||
|
|
<typeStatus id="549B883EFFB2214ED990FDEFFF7A60F6" box="[167,213,633,657]" pageId="63" pageNumber="2845">type</typeStatus>
|
|||
|
|
strain is
|
|||
|
|
<collectionCode id="ED31AE59FFB2214ED802FDEEFEC260F7" box="[309,365,632,656]" country="Germany" httpUri="http://grbio.org/cool/4644-42cg" name="Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH" pageId="63" pageNumber="2845">DSM</collectionCode>
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|||
|
|
18382
|
|||
|
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<collectionCode id="ED31AE59FFB2214ED884FDE1FE1260E2" box="[435,445,631,645]" name="Tavera, Department of Geology and Geophysics" pageId="63" pageNumber="2845">T</collectionCode>
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|||
|
|
</superScript>
|
|||
|
|
=
|
|||
|
|
<collectionCode id="ED31AE59FFB2214ED8E5FDEEFDAB60F7" box="[466,516,632,656]" country="Japan" httpUri="http://grbio.org/cool/iyky-md37" name="Japan Collection of Microorganisms" pageId="63" pageNumber="2845">JCM</collectionCode>
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|||
|
|
14108
|
|||
|
|
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|
<collectionCode id="ED31AE59FFB2214EDB7DFDE1FDFB60E2" box="[586,596,631,645]" name="Tavera, Department of Geology and Geophysics" pageId="63" pageNumber="2845">T</collectionCode>
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|||
|
|
</superScript>
|
|||
|
|
=
|
|||
|
|
<specimenCode id="DB869EE7FFB2214EDB56FDEEFD7460F7" box="[609,731,632,656]" collectionCode="NRIC" country="Japan" httpUri="http://grbio.org/cool/4kdp-d4vz" name="NODAI Research Institute Culture Collection" pageId="63" pageNumber="2845">NRIC 0676</specimenCode>
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|
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<superScript id="7C559BD4FFB2214EDBECFDE1FD4C60E2" attach="none" box="[731,739,631,645]" fontSize="6" pageId="63" pageNumber="2845">
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|
|
<collectionCode id="ED31AE59FFB2214EDBECFDE1FD4C60E2" box="[731,739,631,645]" name="Tavera, Department of Geology and Geophysics" pageId="63" pageNumber="2845">T</collectionCode>
|
|||
|
|
</superScript>
|
|||
|
|
</materialsCitation>
|
|||
|
|
.
|
|||
|
|
</paragraph>
|
|||
|
|
</subSubSection>
|
|||
|
|
<subSubSection id="C33A6517FFB2214ED94EFD30FD1260D9" box="[121,701,678,702]" pageId="63" pageNumber="2845" type="description">
|
|||
|
|
<paragraph id="8B9F369CFFB2214ED94EFD30FD1260D9" blockId="63.[120,760,184,749]" box="[121,701,678,702]" pageId="63" pageNumber="2845">Genome sequence accession number: AZFY00000000.</paragraph>
|
|||
|
|
</subSubSection>
|
|||
|
|
<subSubSection id="C33A6517FFB2214ED94EFD42FDCB608B" box="[121,612,724,749]" pageId="63" pageNumber="2845" type="materials_examined">
|
|||
|
|
<paragraph id="8B9F369CFFB2214ED94EFD42FDCB608B" blockId="63.[120,760,184,749]" box="[121,612,724,749]" pageId="63" pageNumber="2845">
|
|||
|
|
16S rRNA gene accession number:
|
|||
|
|
<accessionNumber id="9473AB7FFFB2214ED8D9FD42FDCF608B" box="[494,608,724,748]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/AB262731" pageId="63" pageNumber="2845">AB262731</accessionNumber>
|
|||
|
|
.
|
|||
|
|
</paragraph>
|
|||
|
|
</subSubSection>
|
|||
|
|
</treatment>
|
|||
|
|
</document>
|