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<document id="5A6B1C03B960383D26BBA351BC888AAE" ID-CLB-Dataset="30291" ID-DOI="10.11646/zootaxa.4407.3.8" ID-GBIF-Dataset="a30b0cfb-72ef-49cf-b982-d1a7f7be5027" ID-ISSN="1175-5326" ID-Zenodo-Dep="1216652" ID-ZooBank="12E7CC42-A1D6-49FD-9D37-1682F41F8901" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="existingObjects,plazi" IM.taxonomicNames_approvedBy="felipe" checkinTime="1523435171168" checkinUser="plazi" docAuthor="De Carvalho, Claudio J. B. & Haseyama, Kirstern Lica F." docDate="2018" docId="03BF87F8FF97FF8EF882F94DFED46AA7" docLanguage="en" docName="zootaxa.4407.3.8.pdf" docOrigin="Zootaxa 4407 (3)" docStyle="DocumentStyle:647186512141C8FC8976D5BCC54AEB7D.9:Zootaxa.2013-.journal_article" docStyleId="647186512141C8FC8976D5BCC54AEB7D" docStyleName="Zootaxa.2013-.journal_article" docStyleVersion="9" docTitle="Polietina Schnabl & Dziedzicki 1911" docType="treatment" docVersion="7" lastPageNumber="422" masterDocId="FF86FF80FF90FF86F815FFF4FFEC6B2F" masterDocTitle="A new species of Polietina (Diptera: Muscidae) from South America, with an updated phylogeny of the genus and a review of species’ identity in GenBank" masterLastPageNumber="426" masterPageNumber="415" pageNumber="422" updateTime="1698536290462" updateUser="ExternalLinkService">
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<mods:titleInfo id="9139292706CF1AB94AF7843C174BD7C0">
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<mods:title id="4ACE659F21DBA9BBC06CECB4C68A9603">A new species of Polietina (Diptera: Muscidae) from South America, with an updated phylogeny of the genus and a review of species’ identity in GenBank</mods:title>
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<mods:namePart id="5FB41D131652A5D09B4646A3DC559E97">De Carvalho, Claudio J. B.</mods:namePart>
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</mods:name>
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<mods:name id="5EF349A4E273F5D04CABCCFD7E6EBEEC" type="personal">
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</mods:role>
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<mods:namePart id="D8D002A08156CBFA6729891ECA86B50F">Haseyama, Kirstern Lica F.</mods:namePart>
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<mods:typeOfResource id="33FA2F444367410C166D255376761EF6">text</mods:typeOfResource>
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<mods:title id="A2D5A764C0E376B5036C8AF9D73707A3">Zootaxa</mods:title>
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<mods:part id="FA6ED541D6A83EF29266D1C62C15ECEE">
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<mods:date id="D882847FCD37E69FE6714E58A9BF37D5">2018</mods:date>
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<mods:number id="C3479F13079A5DDE580FA7C1E4EB021A">2018-04-11</mods:number>
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<mods:number id="68AB3A52DA267813F70AC8DC9C65185E">4407</mods:number>
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<mods:number id="B2E43B179636ABA2ACC4CB0289AA7FDA">3</mods:number>
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<mods:identifier id="A195AEBFEA429D7BE9C714DB42C82A0F" type="DOI">10.11646/zootaxa.4407.3.8</mods:identifier>
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<treatment id="03BF87F8FF97FF8EF882F94DFED46AA7" ID-DOI="http://doi.org/10.5281/zenodo.5966383" ID-GBIF-Taxon="143536700" ID-Zenodo-Dep="5966383" LSID="urn:lsid:plazi:treatment:03BF87F8FF97FF8EF882F94DFED46AA7" httpUri="http://treatment.plazi.org/id/03BF87F8FF97FF8EF882F94DFED46AA7" lastPageId="8" lastPageNumber="422" pageId="7" pageNumber="422">
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<subSubSection id="C30C6565FF97FF81F882F94DFD1E6DFC" box="[151,754,1721,1747]" pageId="7" pageNumber="422" type="nomenclature">
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<paragraph id="8BA936EEFF97FF81F882F94DFD1E6DFC" blockId="7.[151,754,1721,1747]" box="[151,754,1721,1747]" pageId="7" pageNumber="422">
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<heading id="D0E18182FF97FF81F882F94DFD1E6DFC" bold="true" box="[151,754,1721,1747]" fontSize="11" level="1" pageId="7" pageNumber="422" reason="1">
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<emphasis id="B962EAFCFF97FF81F882F94DFD1E6DFC" bold="true" box="[151,754,1721,1747]" pageId="7" pageNumber="422">
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Review of
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<taxonomicName id="4C164D6DFF97FF81F90CF94DFE6A6DFC" ID-CoL="6TSL" ID-ENA="253336" authorityName="Schnabl & Dziedzicki" authorityYear="1911" box="[281,390,1721,1747]" class="Insecta" family="Muscidae" genus="Polietina" higherTaxonomySource="GBIF" kingdom="Animalia" order="Diptera" pageId="7" pageNumber="422" phylum="Arthropoda" rank="genus">
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<emphasis id="B962EAFCFF97FF81F90CF94DFE6A6DFC" bold="true" box="[281,390,1721,1747]" italics="true" pageId="7" pageNumber="422">Polietina</emphasis>
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</taxonomicName>
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species’ identity in GenBank
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</emphasis>
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection id="C30C6565FF97FF8EF882F8F4FED46AA7" lastPageId="8" lastPageNumber="423" pageId="7" pageNumber="422" type="description">
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<paragraph id="8BA936EEFF97FF8EF882F8F4FED46AA7" blockId="7.[151,1436,1792,2033]" lastBlockId="8.[151,1437,151,392]" lastPageId="8" lastPageNumber="423" pageId="7" pageNumber="422">
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Analyses with COI nucleotide sequences available in GenBank for
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<taxonomicName id="4C164D6DFF97FF81FB8DF8F4FC136C37" authorityName="Schnabl & Dziedzicki" authorityYear="1911" box="[920,1023,1792,1816]" class="Insecta" family="Muscidae" genus="Polietina" higherTaxonomySource="GBIF" kingdom="Animalia" order="Diptera" pageId="7" pageNumber="422" phylum="Arthropoda" rank="genus">
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<emphasis id="B962EAFCFF97FF81FB8DF8F4FC136C37" box="[920,1023,1792,1816]" italics="true" pageId="7" pageNumber="422">Polietina</emphasis>
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</taxonomicName>
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species estimated that some species were not reciprocally monophyletic (
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<figureCitation id="132D2A6BFF97FF81FA22F8D0FD446C13" box="[567,680,1828,1853]" captionStart="FIGURE 10" captionStartId="8.[151,250,880,902]" captionTargetBox="[154,1129,449,859]" captionTargetId="figure@8.[151,1436,447,859]" captionTargetPageId="8" captionText="FIGURE 10. Molecular phylogenetic hypothesis using Bayesian posterior probabilities of COI sequences (644 bp, model = GTR+G) for nine Polietina specimens and two outgroup taxa with Bayesian posterior probability values. Names in italic are those currently at GenBank; names in bold italic are species identity of vouchers after detailed morphological revision. GenBank accession numbers are provided in parentheses. *Wrongly assigned vouchers.See text for explanation." httpUri="https://zenodo.org/record/1216660/files/figure.png" pageId="7" pageNumber="422">Figure 10</figureCitation>
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). This led us to suspect that some vouchers associated to GenBank sequences were misidentified. The morphological re-examination of the vouchers confirmed the problem (
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<tableCitation id="C6940355FF97FF81FD2DF8BCFA636C4F" box="[1336,1423,1864,1889]" captionStart="TABLE 2" captionStartId="8.[151,239,1034,1057]" captionText="TABLE 2. List of vouchers revised in the study, including the available identification in GenBank, voucher ID and GenBank accession numbers for all sequences from the corresponding specimen. All vouchers are deposited in DZUP." pageId="7" pageNumber="422">Table 2</tableCitation>
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). Though most identifications were correct, one of the vouchers of
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<taxonomicName id="4C164D6DFF97FF81FB85F898FBA86CAB" baseAuthorityName="Couri & Machado" baseAuthorityYear="1990" box="[912,1092,1900,1924]" class="Insecta" family="Muscidae" genus="Polietina" higherTaxonomySource="GBIF" kingdom="Animalia" order="Diptera" pageId="7" pageNumber="422" phylum="Arthropoda" rank="species" species="prima">
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<emphasis id="B962EAFCFF97FF81FB85F898FBA86CAB" box="[912,1092,1900,1924]" italics="true" pageId="7" pageNumber="422">Polietina prima</emphasis>
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</taxonomicName>
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was actually
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<taxonomicName id="4C164D6DFF97FF81FCF0F899FA8F6CAB" baseAuthorityName="Stein" baseAuthorityYear="1904" box="[1253,1379,1900,1924]" class="Insecta" family="Muscidae" genus="Polietina" higherTaxonomySource="GBIF" kingdom="Animalia" order="Diptera" pageId="7" pageNumber="422" phylum="Arthropoda" rank="species" species="orbitalis">
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<emphasis id="B962EAFCFF97FF81FCF0F899FA8F6CAB" box="[1253,1379,1900,1924]" italics="true" pageId="7" pageNumber="422">P. orbitalis</emphasis>
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</taxonomicName>
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, and vouchers from
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<taxonomicName id="4C164D6DFF97FF81F95FF864FE166C87" authorityName="De Carvalho & Haseyama" authorityYear="2018" baseAuthorityName="Enderlein" baseAuthorityYear="1927" box="[330,506,1936,1960]" class="Insecta" family="Muscidae" genus="Polietina" higherTaxonomySource="GBIF" kingdom="Animalia" order="Diptera" pageId="7" pageNumber="422" phylum="Arthropoda" rank="species" species="steini">
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<emphasis id="B962EAFCFF97FF81F95FF864FE166C87" box="[330,506,1936,1960]" italics="true" pageId="7" pageNumber="422">Polietina steini</emphasis>
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</taxonomicName>
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and one from
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<taxonomicName id="4C164D6DFF97FF81FAA5F865FCDC6C87" baseAuthorityName="Stein" baseAuthorityYear="1904" box="[688,816,1936,1960]" class="Insecta" family="Muscidae" genus="Polietina" higherTaxonomySource="GBIF" kingdom="Animalia" order="Diptera" pageId="7" pageNumber="422" phylum="Arthropoda" rank="species" species="orbitalis">
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<emphasis id="B962EAFCFF97FF81FAA5F865FCDC6C87" box="[688,816,1936,1960]" italics="true" pageId="7" pageNumber="422">P. orbitalis</emphasis>
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</taxonomicName>
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were actually
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<taxonomicName id="4C164D6DFF97FF81FBF6F864FB636C88" box="[995,1167,1936,1959]" class="Insecta" family="Muscidae" genus="Cyrtoneuropsis" higherTaxonomySource="GBIF" kingdom="Animalia" order="Diptera" pageId="7" pageNumber="422" phylum="Arthropoda" rank="genus">
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<emphasis id="B962EAFCFF97FF81FBF6F864FB636C88" box="[995,1167,1936,1959]" italics="true" pageId="7" pageNumber="422">Cyrtoneuropsis</emphasis>
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</taxonomicName>
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species. The Bayesian inference carried out here estimated sequences from these vouchers in the same lineage as the other
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<taxonomicName id="4C164D6DFF97FF81FD20F840FA706CE3" authorityName="Schnabl & Dziedzicki" authorityYear="1911" box="[1333,1436,1972,1996]" class="Insecta" family="Muscidae" genus="Polietina" higherTaxonomySource="GBIF" kingdom="Animalia" order="Diptera" pageId="7" pageNumber="422" phylum="Arthropoda" rank="genus">
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<emphasis id="B962EAFCFF97FF81FD20F840FA706CE3" box="[1333,1436,1972,1996]" italics="true" pageId="7" pageNumber="422">Polietina</emphasis>
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</taxonomicName>
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species with 100% posterior probability. In light of this evidence, we think the sequences are actually from
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<taxonomicName id="4C164D6DFF98FF8EF882FF6CFF126B9F" authorityName="Schnabl & Dziedzicki" authorityYear="1911" box="[151,254,152,176]" class="Insecta" family="Muscidae" genus="Polietina" higherTaxonomySource="GBIF" kingdom="Animalia" order="Diptera" pageId="8" pageNumber="423" phylum="Arthropoda" rank="genus">
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<emphasis id="B962EAFCFF98FF8EF882FF6CFF126B9F" box="[151,254,152,176]" italics="true" pageId="8" pageNumber="423">Polietina</emphasis>
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</taxonomicName>
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species, but the vouchers were wrongly assigned (e.g., wrong labeling or mixed samples). Furthermore, the voucher from sequence
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<accessionNumber id="9445AB0DFF98FF8EF9C3FF48FDA76BFA" box="[470,587,188,213]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/AJ879599" pageId="8" pageNumber="423">AJ879599</accessionNumber>
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, identified here as
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<taxonomicName id="4C164D6DFF98FF8EFB32FF48FC3F6BFC" box="[807,979,188,211]" class="Insecta" family="Muscidae" genus="Cyrtoneuropsis" higherTaxonomySource="GBIF" kingdom="Animalia" order="Diptera" pageId="8" pageNumber="423" phylum="Arthropoda" rank="genus">
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<emphasis id="B962EAFCFF98FF8EFB32FF48FC3F6BFC" box="[807,979,188,211]" italics="true" pageId="8" pageNumber="423">Cyrtoneuropsis</emphasis>
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</taxonomicName>
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sp., is in a clade within other
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<taxonomicName id="4C164D6DFF98FF8EFD20FF48FF1A6BD7" baseAuthorityName="Stein" baseAuthorityYear="1904" class="Insecta" family="Muscidae" genus="Polietina" higherTaxonomySource="GBIF" kingdom="Animalia" order="Diptera" pageId="8" pageNumber="423" phylum="Arthropoda" rank="species" species="orbitalis">
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<emphasis id="B962EAFCFF98FF8EFD20FF48FF1A6BD7" italics="true" pageId="8" pageNumber="423">Polietina orbitalis</emphasis>
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</taxonomicName>
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specimens. Therefore, we believe the sequence was actually from
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<taxonomicName id="4C164D6DFF98FF8EFBC9FF15FBB96BD7" baseAuthorityName="Stein" baseAuthorityYear="1904" box="[988,1109,224,248]" class="Insecta" family="Muscidae" genus="Polietina" higherTaxonomySource="GBIF" kingdom="Animalia" order="Diptera" pageId="8" pageNumber="423" phylum="Arthropoda" rank="species" species="orbitalis">
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<emphasis id="B962EAFCFF98FF8EFBC9FF15FBB96BD7" box="[988,1109,224,248]" italics="true" pageId="8" pageNumber="423">P. orbitalis</emphasis>
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</taxonomicName>
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, as indicated in the GenBank record. The analysis of COI sequences also indicated that
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<taxonomicName id="4C164D6DFF98FF8EFB3DFEF0FC3F6A33" authorityName="Couri & de Carvalho" authorityYear="1996" box="[808,979,260,284]" class="Insecta" family="Muscidae" genus="Polietina" higherTaxonomySource="GBIF" kingdom="Animalia" order="Diptera" pageId="8" pageNumber="423" phylum="Arthropoda" rank="species" species="nigra">
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<emphasis id="B962EAFCFF98FF8EFB3DFEF0FC3F6A33" box="[808,979,260,284]" italics="true" pageId="8" pageNumber="423">Polietina nigra</emphasis>
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</taxonomicName>
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was paraphyletic, because it included
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<emphasis id="B962EAFCFF98FF8EFD92FEF1FF0D6A10" italics="true" pageId="8" pageNumber="423">
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<taxonomicName id="4C164D6DFF98FF8EFD92FEF1FF326A10" baseAuthorityName="Couri & Machado" baseAuthorityYear="1990" class="Insecta" family="Muscidae" genus="Polietina" higherTaxonomySource="GBIF" kingdom="Animalia" order="Diptera" pageId="8" pageNumber="423" phylum="Arthropoda" rank="species" species="prima">P. prima</taxonomicName>
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.
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</emphasis>
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This result reinforced the morphological evidence to the synonym proposed here. After this reassignment of the vouchers’ identity, all
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<taxonomicName id="4C164D6DFF98FF8EF9DAFEB8FDDA6A4B" authorityName="Schnabl & Dziedzicki" authorityYear="1911" box="[463,566,332,356]" class="Insecta" family="Muscidae" genus="Polietina" higherTaxonomySource="GBIF" kingdom="Animalia" order="Diptera" pageId="8" pageNumber="423" phylum="Arthropoda" rank="genus">
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<emphasis id="B962EAFCFF98FF8EF9DAFEB8FDDA6A4B" box="[463,566,332,356]" italics="true" pageId="8" pageNumber="423">Polietina</emphasis>
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</taxonomicName>
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species with more than a single sequence were estimated as reciprocally monophyletic.
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</paragraph>
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</subSubSection>
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</treatment>
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</document>
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