201 lines
18 KiB
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201 lines
18 KiB
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<document id="BAC55121FDFDA85EABF6D9CDB9A239C7" ID-DOI="10.12651/JSR.2021.10.1.012" ID-ISSN="2713-8615" ID-Zenodo-Dep="8120003" IM.bibliography_approvedBy="felipe" IM.illustrations_approvedBy="felipe" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.tables_requiresApprovalFor="GgImagineBatch" IM.taxonomicNames_approvedBy="felipe" IM.treatments_approvedBy="felipe" checkinTime="1688643523575" checkinUser="felipe" docAuthor="Jung, Hye Su, Yoon, Jung-Hoon, Joh, Kiseong, Seong, Chi-Nam, Kim, Won-Yong, Im, Wan-Taek, Kim, Myung-Kyum, Cha, Chang-Jun, Kim, Seung-Bum & Jeon, Che-Ok" docDate="2021" docId="1F3087B98345FFECFCB7B23EA6A1F749" docLanguage="en" docName="JSpeciesRes.10.1.12-22.pdf" docOrigin="Journal of Species Research 10 (1)" docStyle="DocumentStyle:4D398BFF45FF8CA9E08F546BB06AE372.1:JSpeciesRes.2012-.journal_article" docStyleId="4D398BFF45FF8CA9E08F546BB06AE372" docStyleName="JSpeciesRes.2012-.journal_article" docStyleVersion="1" docTitle="Microvirga flocculans MMS" docType="treatment" docVersion="2" lastPageNumber="21" masterDocId="E309FFC1834DFFE5FF9EB145A759F37C" masterDocTitle="A report of 35 unrecorded bacterial species belonging to the classes Alphaproteobacteria and Betaproteobacteria in Korea" masterLastPageNumber="22" masterPageNumber="12" pageNumber="20" updateTime="1688643868652" updateUser="ExternalLinkService" zenodo-license-document="CC-BY-4.0">
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<mods:titleInfo id="5DBB4D5FFBE606D79BFDFF12097A3DB8">
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<mods:title id="A19DB19C12E4A9E407C9497224006877">A report of 35 unrecorded bacterial species belonging to the classes Alphaproteobacteria and Betaproteobacteria in Korea</mods:title>
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<mods:namePart id="2AA551D7F1CC45504206CCB8175CDA55">Jung, Hye Su</mods:namePart>
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<mods:affiliation id="DB704F972D6D4433CF82D4E7D5B9130B">Department of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea</mods:affiliation>
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<mods:namePart id="31A7C24AE0F062FA8DA041F497BA21B4">Yoon, Jung-Hoon</mods:namePart>
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<mods:affiliation id="B056E9F02F478C8E30E8F885217FF400">Department of Food Science and Biotechnology, Sungkyunkwan University, Suwon 16419, Republic of Korea</mods:affiliation>
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</mods:name>
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<mods:name id="2B07CE2F9BD89411795DBDF174C18BFB" type="personal">
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<mods:namePart id="523DF8B7F878CC4567BD9B3B2CB483CB">Joh, Kiseong</mods:namePart>
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<mods:affiliation id="1334AC48F2062C51FB8BF2629FC010E4">Department of Bioscience and Biotechnology, Hankuk University of Foreign Studies, Yongin 02450, Republic of Korea</mods:affiliation>
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</mods:name>
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</mods:role>
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<mods:namePart id="706C3DCF42FBE8535A1FA30262CD4925">Seong, Chi-Nam</mods:namePart>
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<mods:affiliation id="1672879F67FF4AE5EC7D515A9487A8D0">Department of Biology, Sunchon National University, Suncheon 57922, Republic of Korea</mods:affiliation>
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</mods:name>
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<mods:name id="3402FF5C9D5BA86E9F60BA985E05C2A2" type="personal">
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</mods:role>
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<mods:namePart id="35132BF8FD613622D6732888E1BCD55B">Kim, Won-Yong</mods:namePart>
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<mods:affiliation id="86E81360BB08B9E2533EFF2AF476F121">Department of Microbiology, College of Medicine, Chung-Ang University, Seoul 06974, Republic</mods:affiliation>
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</mods:name>
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<mods:name id="85D7AB98CA9D9BC89AB477C01A8C4A5D" type="personal">
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</mods:role>
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<mods:namePart id="33E05F7EF9B80D0E68651A73FE3C0BA8">Im, Wan-Taek</mods:namePart>
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<mods:affiliation id="CFFA995F2EB04D10F3D2A63B221833FA">Department of Biotechnology, Hankyong National University, Anseong 17546, Republic of Korea</mods:affiliation>
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</mods:name>
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<mods:name id="24B5350BC6558B3E3DF05930E5E95182" type="personal">
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</mods:role>
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<mods:namePart id="01223747B061FE128E06B321B5970E9A">Kim, Myung-Kyum</mods:namePart>
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<mods:affiliation id="07596F5976C3ED033992F4491E4AEEDC">Department of Bio and Environmental Technology, College of Natural Science, Seoul Women’s University, Seoul 17987, Republic of Korea</mods:affiliation>
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</mods:name>
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<mods:name id="3AA1C1C1DE6C79AEF766D94C662D3A66" type="personal">
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<mods:namePart id="36D3D5883976B9517B1814D7E6B79E10">Cha, Chang-Jun</mods:namePart>
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<mods:affiliation id="DC0974B9721061063F8BF343D9FEA1B2">Department of Systems Biotechnology, Chung-Ang University, Anseong 17546, Republic of Korea</mods:affiliation>
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</mods:name>
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<mods:name id="BD8CCF49CA05D38877FA6EF263C29D1C" type="personal">
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<mods:namePart id="E5A8644F4759E9D21D118C3A2FF28907">Kim, Seung-Bum</mods:namePart>
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<mods:affiliation id="09B6A7B2C0B5E3942C795219129A392D">Department of Microbiology, Chungnam National University, Daejeon 34134, Republic of Korea</mods:affiliation>
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</mods:name>
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<mods:name id="92F3FB3F4E5C4B69B338D31C32658658" type="personal">
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</mods:role>
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<mods:namePart id="7407DDE662AEAF7A4EE16FBD33E202EB">Jeon, Che-Ok</mods:namePart>
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<mods:affiliation id="DE7648F77C78529DE1BCFF66A5B76147">Department of Life Science, Chung-Ang University, Seoul 06974, Republic of Korea</mods:affiliation>
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<mods:nameIdentifier id="B1AD3B6D9F83B058D0D24773AEE8C77A" type="email">cojeon@cau.ac.kr</mods:nameIdentifier>
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<mods:typeOfResource id="571055328130FF7B7AFD2A488A439C30">text</mods:typeOfResource>
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<mods:title id="5672F19370E5334705CBE81593FF9746">Journal of Species Research</mods:title>
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</mods:titleInfo>
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<mods:part id="01B21059110D8E87D8490B5163DD1C43">
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<mods:date id="029A21C27D37D2CB855A49244187A540">2021</mods:date>
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<mods:detail id="48513E703E245F3AA75198C2C2513E63" type="volume">
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<mods:number id="BF5B07A178E1AB19222614B492A7D9FC">10</mods:number>
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<mods:detail id="4E2E52B99042CEE803FB0468FE6C84A1" type="issue">
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<mods:number id="1EC4D93EB1DD01B558D14CBEA290A4E3">1</mods:number>
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<mods:start id="06ABCFB890528013F233ACD68235A144">12</mods:start>
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<mods:end id="1BAB926F65472DB1FB06683E7E4C3CAF">22</mods:end>
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<mods:classification id="5156138D098C657DB4B31E2444330690">journal article</mods:classification>
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<mods:identifier id="903074CDBD9B5E8050CCEB6A60EF1562" type="DOI">10.12651/JSR.2021.10.1.012</mods:identifier>
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<mods:identifier id="27B2A4F6F8A23E9F547063A815B0D470" type="ISSN">2713-8615</mods:identifier>
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<mods:identifier id="F574FE2B8C610D05A28F218899F1A86D" type="Zenodo-Dep">8120003</mods:identifier>
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<treatment id="1F3087B98345FFECFCB7B23EA6A1F749" ID-DOI="http://doi.org/10.5281/zenodo.8120013" ID-Zenodo-Dep="8120013" LSID="urn:lsid:plazi:treatment:1F3087B98345FFECFCB7B23EA6A1F749" httpUri="http://treatment.plazi.org/id/1F3087B98345FFECFCB7B23EA6A1F749" lastPageId="9" lastPageNumber="21" pageId="8" pageNumber="20">
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<subSubSection id="DF8365248345FFEDFCB7B23EA4B3F65A" pageId="8" pageNumber="20" type="nomenclature">
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<paragraph id="972636AF8345FFEDFCB7B23EA205F0EF" blockId="8.[809,1372,890,915]" box="[809,1372,890,915]" pageId="8" pageNumber="20">
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<heading id="CC6E81C38345FFEDFCB7B23EA205F0EF" box="[809,1372,890,915]" fontSize="10" level="2" pageId="8" pageNumber="20" reason="5">
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<emphasis id="A5EDEABD8345FFEDFCB7B23EA205F0EF" bold="true" box="[809,1372,890,915]" pageId="8" pageNumber="20">
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Description of
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<taxonomicName id="50994D2C8345FFEDFC4EB23EA254F0EF" ID-CoL="439VF" ID-ENA="217168" authority="MMS" authorityName="MMS" box="[976,1293,890,915]" class="Alphaproteobacteria" family="Methylobacteriaceae" genus="Microvirga" kingdom="Bacteria" order="Rhizobiales" pageId="8" pageNumber="20" phylum="Proteobacteria" rank="species" species="flocculans">
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<emphasis id="A5EDEABD8345FFEDFC4EB23EA39AF0EE" bold="true" box="[976,1219,890,915]" italics="true" pageId="8" pageNumber="20">Microvirga flocculans</emphasis>
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MMS
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</taxonomicName>
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19-R33
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</emphasis>
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</heading>
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</paragraph>
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<paragraph id="972636AF8345FFEDFCDEB2E9A4B3F65A" blockId="8.[809,1414,940,1319]" pageId="8" pageNumber="20">
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Cells are Gram-staining-negative, non-flagellated, and rod shaped. Colonies are circular, raised, entire, and palecream colored after 3 days of incubation at 30℃ on R2A. Positive for nitrate reduction and esculin hydrolysis. Negative for indole production, glucose fermentation, and arginine dihydrolase, urease, gelatinase, and
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<emphasis id="A5EDEABD8345FFEDFB7CB508A3A8F719" box="[1250,1265,1101,1125]" italics="true" pageId="8" pageNumber="20">β</emphasis>
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-galactosidase activities. Does not utilize D- glucose, L- arabinose D- mannose,
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<subScript id="0B1D34EA8345FFEDFCF9B5D1A422F7DA" attach="right" box="[871,891,1166,1190]" fontSize="7" pageId="8" pageNumber="20">D-</subScript>
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mannitol,
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<emphasis id="A5EDEABD8345FFEDFC79B5CBA4A1F7D9" box="[999,1016,1166,1189]" italics="true" pageId="8" pageNumber="20">N</emphasis>
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-acetylglucosamine,
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<subScript id="0B1D34EA8345FFEDFB4FB5D1A3BCF7DA" attach="right" box="[1233,1253,1166,1190]" fontSize="7" pageId="8" pageNumber="20">D-</subScript>
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maltose, potassium gluconate, capric acid, adipic acid, malic acid, trisodium citrate, and phenylacetic acid. Strain MMS19-R33 (
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<emphasis id="A5EDEABD8345FFEDFCABB5ABA410F67A" bold="true" box="[821,841,1262,1286]" pageId="8" pageNumber="20">=</emphasis>
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NIBRBAC000503369) was isolated from a soil sample, Gurye,
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<collectingCountry id="EF8E763F8345FFEDFC3DB44AA4BFF65A" box="[931,998,1295,1318]" name="South Korea" pageId="8" pageNumber="20">Korea</collectingCountry>
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.
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</paragraph>
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</subSubSection>
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<subSubSection id="DF8365248345FFECFCB7B40AA6A1F749" lastPageId="9" lastPageNumber="21" pageId="8" pageNumber="20" type="description">
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<paragraph id="972636AF8345FFEDFCB7B40AA4E3F6F4" blockId="8.[809,1303,1359,1416]" pageId="8" pageNumber="20">
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<emphasis id="A5EDEABD8345FFEDFCB7B40AA4E3F6F4" bold="true" pageId="8" pageNumber="20">
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Description of
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<taxonomicName id="50994D2C8345FFEDFC4EB40AA434F6F4" authority="MMS" authorityName="MMS" class="Alphaproteobacteria" family="Bradyrhizobiaceae" genus="Bradyrhizobium" kingdom="Bacteria" order="Rhizobiales" pageId="8" pageNumber="20" phylum="Proteobacteria" rank="species" species="liaoningense">
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<emphasis id="A5EDEABD8345FFEDFC4EB40AA24EF61B" bold="true" box="[976,1303,1359,1383]" italics="true" pageId="8" pageNumber="20">Bradyrhizobium liaoningense</emphasis>
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MMS
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</taxonomicName>
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19-T29
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</emphasis>
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</paragraph>
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<paragraph id="972636AF8345FFEDFCA1B4E4A308F467" blockId="8.[809,1420,1441,1820]" pageId="8" pageNumber="20">
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Cells are Gram-staining-negative, non-flagellated, and rod shaped. Colonies are circular, convex, entire, and cream colored after 3 days of incubation at 30℃ on R2A. Positive for nitrate reduction, esculin hydrolysis, and
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<emphasis id="A5EDEABD8345FFEDFCB7B767A461F546" box="[809,824,1570,1594]" italics="true" pageId="8" pageNumber="20">β</emphasis>
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-galactosidase activity. Negative for indole production, glucose fermentation, and arginine dihydrolase, urease, and gelatinase activities. Does not utilize D- glucose, L- arabinose D- mannose, D- mannitol,
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<emphasis id="A5EDEABD8345FFEDFB0CB7C6A3FDF5E6" box="[1170,1188,1667,1690]" italics="true" pageId="8" pageNumber="20">N</emphasis>
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-acetylglucosamine, D- maltose, potassium gluconate, capric acid, adipic acid, malic acid, trisodium citrate, and phenylacetic acid. Strain MMS19-T29 (
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<emphasis id="A5EDEABD8345FFEDFC5CB7A6A48FF587" bold="true" box="[962,982,1763,1787]" pageId="8" pageNumber="20">=</emphasis>
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NIBRBAC000503385) was isolated from a soil sample, Gurye,
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<collectingCountry id="EF8E763F8345FFEDFB94B641A314F467" box="[1034,1101,1796,1819]" name="South Korea" pageId="8" pageNumber="20">Korea</collectingCountry>
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.
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</paragraph>
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<paragraph id="972636AF8345FFEDFCB7B601A4C5F400" blockId="8.[809,1301,1860,1916]" pageId="8" pageNumber="20">
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<emphasis id="A5EDEABD8345FFEDFCB7B601A4C5F400" bold="true" pageId="8" pageNumber="20">
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Description of
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<taxonomicName id="50994D2C8345FFEDFC4EB601A43EF400" authority="HMF" authorityName="HMF" class="Betaproteobacteria" family="Comamonadaceae" genus="Pseudacidovorax" kingdom="Bacteria" order="Burkholderiales" pageId="8" pageNumber="20" phylum="Proteobacteria" rank="species" species="intermedius">
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<emphasis id="A5EDEABD8345FFEDFC4EB601A24CF420" bold="true" box="[976,1301,1860,1884]" italics="true" pageId="8" pageNumber="20">Pseudacidovorax intermedius</emphasis>
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HMF
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</taxonomicName>
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4787
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</emphasis>
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</paragraph>
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<paragraph id="972636AF8345FFECFCA1B6D0A5BAF143" blockId="8.[809,1414,1941,1998]" lastBlockId="9.[174,779,261,575]" lastPageId="9" lastPageNumber="21" pageId="8" pageNumber="20">
|
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|
|
Cells are Gram-staining-negative, non-flagellated, and short rod shaped. Colonies are circular, convex, smooth, slimy, and light-yellow colored after 3 days of incubation at 30℃ on R2A. Positive for urease activity. Negative for nitrate reduction, indole production, glucose fermentation, esculin hydrolysis, and arginine dihydrolase, gelatinase, and
|
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|
|
<emphasis id="A5EDEABD8344FFECFF42B0C3A7B2F2E2" box="[220,235,390,414]" italics="true" pageId="9" pageNumber="21">β</emphasis>
|
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|
|
-galactosidase activities. D- Glucose, potassium gluconate, and malic acid are utilized. Does not utilize L- arabinose, D- mannose, D- mannitol,
|
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|
|
<emphasis id="A5EDEABD8344FFECFD8CB082A57DF2A2" box="[530,548,455,478]" italics="true" pageId="9" pageNumber="21">N</emphasis>
|
|||
|
|
-acetylglucosamine, D- maltose, capric acid, adipic acid, trisodium citrate, and phenylacetic acid. Strain HMF4787 (
|
|||
|
|
<emphasis id="A5EDEABD8344FFECFDA3B342A508F163" bold="true" box="[573,593,519,543]" pageId="9" pageNumber="21">=</emphasis>
|
|||
|
|
NIBRBAC00050 3105) was isolated from a leaf sample, Yongin,
|
|||
|
|
<collectingCountry id="EF8E763F8344FFECFD02B36DA586F143" box="[668,735,552,575]" name="South Korea" pageId="9" pageNumber="21">Korea</collectingCountry>
|
|||
|
|
.
|
|||
|
|
</paragraph>
|
|||
|
|
<paragraph id="972636AF8344FFECFF30B32CA678F1DE" blockId="9.[174,664,617,674]" pageId="9" pageNumber="21">
|
|||
|
|
<emphasis id="A5EDEABD8344FFECFF30B32CA678F1DE" bold="true" pageId="9" pageNumber="21">
|
|||
|
|
Description of
|
|||
|
|
<taxonomicName id="50994D2C8344FFECFECBB32CA7B5F1DE" authority="HMF" authorityName="HMF" class="Gammaproteobacteria" family="Burkholderiaceae" genus="Paraburkholderia" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Burkholderiales" pageId="9" pageNumber="21" phylum="Proteobacteria" rank="species" species="caledonica">
|
|||
|
|
<emphasis id="A5EDEABD8344FFECFECBB32CA5C1F1FD" bold="true" box="[341,664,617,641]" italics="true" pageId="9" pageNumber="21">Paraburkholderia caledonica</emphasis>
|
|||
|
|
HMF
|
|||
|
|
</taxonomicName>
|
|||
|
|
5328
|
|||
|
|
</emphasis>
|
|||
|
|
</paragraph>
|
|||
|
|
<paragraph id="972636AF8344FFECFF5BB3FEA6A1F749" blockId="9.[174,780,699,1078]" pageId="9" pageNumber="21">
|
|||
|
|
Cells are Gram-staining-negative, flagellated, and rod shaped. Colonies are circular, convex, smooth, and light-yellow colored after 3 days of incubation at 30℃ on R2A. Positive for esculin hydrolysis and
|
|||
|
|
<emphasis id="A5EDEABD8344FFECFD8AB259A57BF048" box="[532,546,796,820]" italics="true" pageId="9" pageNumber="21">β</emphasis>
|
|||
|
|
-galactosidase activity. Negative for nitrate reduction, indole production, glucose fermentation, and arginine dihydrolase, urease, and gelatinase activities. D- Glucose, L- arabinose, D- mannitol,
|
|||
|
|
<emphasis id="A5EDEABD8344FFECFD5BB238A58FF0E8" box="[709,726,893,916]" italics="true" pageId="9" pageNumber="21">N</emphasis>
|
|||
|
|
-acetylglucosamine, and potassium gluconate are utilized. Does not utilize
|
|||
|
|
<subScript id="0B1D34EA8344FFECFE81B286A66AF0A8" attach="right" box="[287,307,957,980]" fontSize="7" pageId="9" pageNumber="21">D-</subScript>
|
|||
|
|
mannose,
|
|||
|
|
<subScript id="0B1D34EA8344FFECFE01B286A6EAF0A9" attach="right" box="[415,435,957,981]" fontSize="7" pageId="9" pageNumber="21">D-</subScript>
|
|||
|
|
maltose, capric acid, adipic acid, malic acid, trisodium citrate, and phenylacetic acid. Strain HMF5328 (
|
|||
|
|
<emphasis id="A5EDEABD8344FFECFEB5B2B8A666F769" bold="true" box="[299,319,1021,1045]" pageId="9" pageNumber="21">=</emphasis>
|
|||
|
|
NIBRBAC000503106) was isolated from a soil sample, Gangneung,
|
|||
|
|
<collectingCountry id="EF8E763F8344FFECFE2CB55BA6ADF749" box="[434,500,1054,1077]" name="South Korea" pageId="9" pageNumber="21">Korea</collectingCountry>
|
|||
|
|
.
|
|||
|
|
</paragraph>
|
|||
|
|
</subSubSection>
|
|||
|
|
</treatment>
|
|||
|
|
</document>
|