330 lines
28 KiB
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330 lines
28 KiB
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<document ID-DOI="10.5252/cryptogamie-mycologie2020v41a3" ID-ISSN="1776-100X" ID-Zenodo-Dep="7815042" IM.bibliography_approvedBy="juliana" IM.illustrations_approvedBy="juliana" IM.materialsCitations_approvedBy="juliana" IM.tables_approvedBy="juliana" IM.taxonomicNames_approvedBy="juliana" IM.treatments_approvedBy="juliana" checkinTime="1681175622560" checkinUser="felipe" docAuthor="Dayarathne, Monika C., Wanasinghe, Dhanushka N., Devadatha, B., Abeywickrama, Pranami, G, E. B., Jones, areth, Chomnunti, Putarak, Sarma, V. V., Hyde, Kevin D., Lumyong, Saisamorn, C., Eric H. & Mckenzie" docDate="2020" docId="8A5DBB36FFA82909FC70F915FB53FAB3" docLanguage="en" docName="CryptogamieMycologie.41.3.21-67.pdf" docOrigin="Cryptogamie, Mycologie 20 (3)" docSource="http://dx.doi.org/10.5252/cryptogamie-mycologie2020v41a3" docStyle="DocumentStyle:81F49AB8619EB7E5D11A6328441E2653.1:CryptogamieMycologie.2019-.journal_article" docStyleId="81F49AB8619EB7E5D11A6328441E2653" docStyleName="CryptogamieMycologie.2019-.journal_article" docStyleVersion="1" docTitle="Cryptosphaeria halophila Dayarathne & K. D. Hyde 2020, sp. nov." docType="treatment" docVersion="4" lastPageNumber="41" masterDocId="7664C34EFFBD291FFF95FFE4FFA0FFBD" masterDocTitle="Modern taxonomic approaches to identifying diatrypaceous fungi from marine habitats, with a novel genus Halocryptovalsa Dayarathne & K. D. Hyde, gen. nov." masterLastPageNumber="67" masterPageNumber="21" pageNumber="40" updateTime="1681404243628" updateUser="juliana" zenodo-license-document="CC0-1.0" zenodo-license-figures="CC0-1.0" zenodo-license-treatments="UNSPECIFIED">
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<mods:mods xmlns:mods="http://www.loc.gov/mods/v3">
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<mods:titleInfo>
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<mods:title>Modern taxonomic approaches to identifying diatrypaceous fungi from marine habitats, with a novel genus Halocryptovalsa Dayarathne & K. D. Hyde, gen. nov.</mods:title>
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</mods:titleInfo>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Dayarathne, Monika C.</mods:namePart>
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<mods:affiliation>Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100 (Thailand) World Agroforestry Centre East and Central Asia Office, 132 Lanhei Road, Kunming 650201 (China) Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan (China) monidaya 40 @ gmail. com (corresponding author)</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Wanasinghe, Dhanushka N.</mods:namePart>
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<mods:affiliation>Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100 (Thailand) World Agroforestry Centre East and Central Asia Office, 132 Lanhei Road, Kunming 650201 (China)</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Devadatha, B.</mods:namePart>
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<mods:affiliation>Biotechnology, School of Life Sciences, Pondicherry University, Kalapet, Pondicherry 605014 (India)</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Abeywickrama, Pranami</mods:namePart>
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<mods:affiliation>Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100 (Thailand) of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences (China)</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>G, E. B.</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Jones, areth</mods:namePart>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Chomnunti, Putarak</mods:namePart>
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<mods:affiliation>Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100 (Thailand)</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Sarma, V. V.</mods:namePart>
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<mods:affiliation>Biotechnology, School of Life Sciences, Pondicherry University, Kalapet, Pondicherry 605014 (India)</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Hyde, Kevin D.</mods:namePart>
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<mods:affiliation>Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100 (Thailand) World Agroforestry Centre East and Central Asia Office, 132 Lanhei Road, Kunming 650201 (China) Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan (China)</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Lumyong, Saisamorn</mods:namePart>
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<mods:affiliation>Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200 (Thailand)</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>C., Eric H.</mods:namePart>
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<mods:affiliation>Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai Research New Zealand, Private Bag 92170, Auckland Mail Centre, Auckland 1142 mckenziee @ landcareresearch. co. nz (corresponding</mods:affiliation>
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</mods:name>
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<mods:name type="personal">
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<mods:role>
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<mods:roleTerm>Author</mods:roleTerm>
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</mods:role>
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<mods:namePart>Mckenzie</mods:namePart>
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<mods:affiliation>Thailand) (New Zealand) author)</mods:affiliation>
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</mods:name>
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<mods:typeOfResource>text</mods:typeOfResource>
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<mods:relatedItem type="host">
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<mods:titleInfo>
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<mods:title>Cryptogamie, Mycologie</mods:title>
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</mods:titleInfo>
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<mods:part>
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<mods:date>2020</mods:date>
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<mods:detail type="pubDate">
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<mods:number>2020-03-27</mods:number>
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</mods:detail>
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<mods:detail type="volume">
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<mods:number>20</mods:number>
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</mods:detail>
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<mods:detail type="issue">
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<mods:number>3</mods:number>
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</mods:detail>
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<mods:extent unit="page">
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<mods:start>21</mods:start>
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<mods:end>67</mods:end>
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</mods:extent>
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</mods:part>
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</mods:relatedItem>
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<mods:location>
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<mods:url>http://dx.doi.org/10.5252/cryptogamie-mycologie2020v41a3</mods:url>
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</mods:location>
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<mods:classification>journal article</mods:classification>
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<mods:identifier type="DOI">10.5252/cryptogamie-mycologie2020v41a3</mods:identifier>
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<mods:identifier type="ISSN">1776-100X</mods:identifier>
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<mods:identifier type="Zenodo-Dep">7815042</mods:identifier>
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</mods:mods>
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<treatment ID-DOI="http://doi.org/10.5281/zenodo.7815069" ID-Zenodo-Dep="7815069" LSID="urn:lsid:plazi:treatment:8A5DBB36FFA82909FC70F915FB53FAB3" httpUri="http://treatment.plazi.org/id/8A5DBB36FFA82909FC70F915FB53FAB3" lastPageId="22" lastPageNumber="41" pageId="21" pageNumber="40">
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<subSubSection pageId="21" pageNumber="40" type="nomenclature">
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<paragraph blockId="21.[946,1323,1777,1836]" pageId="21" pageNumber="40">
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<heading centered="true" fontSize="11" level="2" pageId="21" pageNumber="40" reason="4">
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<taxonomicName authority="Dayarathne & K.D.Hyde" authorityName="Dayarathne & K. D. Hyde" authorityYear="2020" class="Dothideomycetes" family="Didymellaceae" genus="Cryptosphaeria" kingdom="Fungi" order="Pleosporales" pageId="21" pageNumber="40" phylum="Ascomycota" rank="species" species="halophila" status="sp. nov.">
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<emphasis bold="true" box="[997,1270,1777,1804]" italics="true" pageId="21" pageNumber="40">Cryptosphaeria halophila</emphasis>
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Dayarathne & K.D.Hyde
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</taxonomicName>
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,
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<taxonomicNameLabel box="[1238,1323,1810,1836]" pageId="21" pageNumber="40" rank="species">sp. nov.</taxonomicNameLabel>
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection pageId="21" pageNumber="40" type="description">
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<paragraph blockId="21.[1094,1174,1841,1868]" box="[1094,1174,1841,1868]" pageId="21" pageNumber="40">
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<heading box="[1094,1174,1841,1868]" centered="true" fontSize="11" level="3" pageId="21" pageNumber="40" reason="3">
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(
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<figureCitation box="[1102,1165,1841,1868]" captionStart="FIG" captionStartId="21.[132,143,1465,1483]" captionTargetBox="[150,1438,213,1422]" captionTargetId="figure-300@21.[701,1254,771,1330]" captionTargetPageId="21" captionText="FIG. 8. — Cryptosphaeria halophila Dayarathne & K.D.Hyde, sp. nov.(MFLU 16-1199 – holotype):A, host (Avicennia sp.); B, horizontal section through conidioma; C-E, conidiophores and conidiogenous cells; F-I, conidia. Scale bars: A, 100 μm; B-E, 50 μm; F-I, 20 μm." figureDoi="http://doi.org/10.5281/zenodo.7815067" httpUri="https://zenodo.org/record/7815067/files/figure.png" pageId="21" pageNumber="40">Fig. 8</figureCitation>
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)
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</heading>
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</paragraph>
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<paragraph blockId="21.[813,1455,1893,2026]" box="[813,1098,1893,1917]" pageId="21" pageNumber="40">MYCOBANK. — MB 824293.</paragraph>
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<paragraph blockId="21.[813,1455,1893,2026]" box="[813,1204,1934,1958]" pageId="21" pageNumber="40">FACESOFFUNGI NUMBER. — FoF 03945.</paragraph>
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</subSubSection>
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<subSubSection pageId="21" pageNumber="40" type="etymology">
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<paragraph blockId="21.[813,1455,1893,2026]" pageId="21" pageNumber="40">ETYMOLOGY. — Name referring to the saline environment from which the fungus was derived.</paragraph>
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</subSubSection>
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<caption ID-DOI="http://doi.org/10.5281/zenodo.7815071" ID-Zenodo-Dep="7815071" box="[381,1198,595,613]" httpUri="https://zenodo.org/record/7815071/files/figure.png" pageId="22" pageNumber="41" startId="22.[381,392,595,613]" targetBox="[143,1444,215,555]" targetPageId="22" targetType="figure">
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<paragraph blockId="22.[381,1198,595,613]" box="[381,1198,595,613]" pageId="22" pageNumber="41">
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FIG. 9. —
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<taxonomicName authority="K. D. Hyde" authorityName="K. D. Hyde" box="[461,771,595,613]" class="Sordariomycetes" family="Diatrypaceae" genus="Cryptovalsa" kingdom="Fungi" order="Xylariales" pageId="22" pageNumber="41" phylum="Ascomycota" rank="species" species="halosarceiicola">
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<emphasis box="[461,686,595,613]" italics="true" pageId="22" pageNumber="41">Cryptovalsa halosarceiicola</emphasis>
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K.D.Hyde
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</taxonomicName>
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(BRIP 20340 – holotype):
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<emphasis bold="true" box="[988,1001,595,613]" pageId="22" pageNumber="41">A</emphasis>
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,
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<emphasis bold="true" box="[1011,1024,595,613]" pageId="22" pageNumber="41">B</emphasis>
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, herbarium material.
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</paragraph>
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</caption>
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<subSubSection pageId="22" pageNumber="41" type="description">
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<paragraph blockId="22.[132,775,696,800]" pageId="22" pageNumber="41">
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CULTURE CHARACTERS. — Reaching
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<quantity box="[503,555,696,720]" metricMagnitude="-2" metricUnit="m" metricValue="2.0" pageId="22" pageNumber="41" unit="cm" value="2.0">2 cm</quantity>
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within seven days on PDA, when incubated at 25°C, circular, flat, with diffuse margin, yellow, and becoming yellowish white, bright yellow to dull yellow with age.
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</paragraph>
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</subSubSection>
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<subSubSection pageId="22" pageNumber="41" type="materials_examined">
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<paragraph blockId="22.[132,775,823,927]" pageId="22" pageNumber="41">
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MATERIAL EXAMINED. —
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<materialsCitation collectingDate="2015-12-16" collectionCode="MFLU" collectorName="M. Dayarathne" country="Thailand" latitude="8.214" location="Tha Pom Khlong Nam" longLatPrecision="1" longitude="98.778534" municipality="Tha Pom Khlong Nam" pageId="22" pageNumber="41" specimenCode="16-1199" specimenCount="1" stateProvince="Krabi Province" typeStatus="holotype">
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<emphasis bold="true" box="[402,494,825,849]" pageId="22" pageNumber="41">
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<collectingCountry box="[402,494,825,849]" name="Thailand" pageId="22" pageNumber="41">Thailand</collectingCountry>
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</emphasis>
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,
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<collectingRegion box="[509,668,823,847]" country="Thailand" name="Krabi" pageId="22" pageNumber="41">Krabi Province</collectingRegion>
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,
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<collectingMunicipality pageId="22" pageNumber="41">Tha Pom Khlong Nam</collectingMunicipality>
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,
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<geoCoordinate box="[274,402,850,874]" degrees="8" direction="north" minutes="12" orientation="latitude" pageId="22" pageNumber="41" precision="1" seconds="50.4" value="8.214">8°12’50.4”N</geoCoordinate>
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,
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<geoCoordinate box="[412,548,850,874]" degrees="98" direction="east" minutes="46" orientation="longitude" pageId="22" pageNumber="41" precision="1" seconds="42.7" value="98.778534">98°46’42.7”E</geoCoordinate>
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, on attached, intertidal decayed wood of
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<taxonomicName box="[304,431,877,900]" class="Magnoliopsida" family="Acanthaceae" genus="Avicennia" kingdom="Plantae" order="Lamiales" pageId="22" pageNumber="41" phylum="Tracheophyta" rank="species" species="undetermined">
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<emphasis box="[304,397,877,900]" italics="true" pageId="22" pageNumber="41">Avicennia</emphasis>
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sp.
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</taxonomicName>
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at a mangrove stand,
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<date box="[646,771,876,900]" pageId="22" pageNumber="41" value="2015-12-16">
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<collectingDate box="[646,771,876,900]" pageId="22" pageNumber="41" value="2015-12-16">16.XII.2015</collectingDate>
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</date>
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,
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<emphasis box="[133,277,903,927]" italics="true" pageId="22" pageNumber="41">
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<collectorName box="[133,277,903,927]" pageId="22" pageNumber="41">M. Dayarathne</collectorName>
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</emphasis>
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, KLA006 (
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<typeStatus box="[389,445,903,927]" pageId="22" pageNumber="41">holo-</typeStatus>
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,
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<collectionCode box="[454,529,903,927]" pageId="22" pageNumber="41">MFLU</collectionCode>
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[MFLU-
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<specimenCode box="[619,700,903,927]" pageId="22" pageNumber="41">16-1199</specimenCode>
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]).
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</materialsCitation>
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</paragraph>
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</subSubSection>
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<subSubSection box="[132,412,950,974]" pageId="22" pageNumber="41" type="distribution">
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<paragraph blockId="22.[132,412,950,974]" box="[132,412,950,974]" pageId="22" pageNumber="41">
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DISTRIBUTION. —
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<collectingCountry box="[318,408,950,974]" name="Thailand" pageId="22" pageNumber="41">Thailand</collectingCountry>
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.
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</paragraph>
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</subSubSection>
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<subSubSection pageId="22" pageNumber="41" type="description">
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<paragraph blockId="22.[132,277,1013,1039]" box="[132,277,1013,1039]" pageId="22" pageNumber="41">
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<heading box="[132,277,1013,1039]" fontSize="9" level="3" pageId="22" pageNumber="41" reason="5">DESCRIPTION</heading>
|
|||
|
|
</paragraph>
|
|||
|
|
<paragraph blockId="22.[132,596,1044,1071]" box="[132,596,1044,1071]" pageId="22" pageNumber="41">
|
|||
|
|
Saprobic on decaying stem of
|
|||
|
|
<taxonomicName box="[457,596,1045,1071]" class="Magnoliopsida" family="Acanthaceae" genus="Avicennia" kingdom="Plantae" order="Lamiales" pageId="22" pageNumber="41" phylum="Tracheophyta" rank="species" species="undetermined">
|
|||
|
|
<emphasis box="[457,560,1045,1071]" italics="true" pageId="22" pageNumber="41">Avicennia</emphasis>
|
|||
|
|
sp.
|
|||
|
|
</taxonomicName>
|
|||
|
|
</paragraph>
|
|||
|
|
<paragraph blockId="22.[132,274,1108,1134]" box="[132,274,1108,1134]" pageId="22" pageNumber="41">
|
|||
|
|
<heading box="[132,274,1108,1134]" fontSize="11" level="3" pageId="22" pageNumber="41" reason="9">
|
|||
|
|
<emphasis box="[132,274,1108,1134]" italics="true" pageId="22" pageNumber="41">Sexual morph</emphasis>
|
|||
|
|
</heading>
|
|||
|
|
</paragraph>
|
|||
|
|
<paragraph blockId="22.[132,298,1140,1166]" box="[132,298,1140,1166]" pageId="22" pageNumber="41">Undetermined.</paragraph>
|
|||
|
|
<paragraph blockId="22.[132,285,1204,1230]" box="[132,285,1204,1230]" pageId="22" pageNumber="41">
|
|||
|
|
<heading box="[132,285,1204,1230]" fontSize="11" level="3" pageId="22" pageNumber="41" reason="9">
|
|||
|
|
<emphasis box="[132,285,1204,1230]" italics="true" pageId="22" pageNumber="41">Asexual morph</emphasis>
|
|||
|
|
</heading>
|
|||
|
|
</paragraph>
|
|||
|
|
<paragraph blockId="22.[132,775,1235,1294]" pageId="22" pageNumber="41">
|
|||
|
|
<emphasis bold="true" box="[132,233,1235,1261]" pageId="22" pageNumber="41">Pycnidia.</emphasis>
|
|||
|
|
140-180 µm in diam., globose to subglobose, ostiolate, coriaceous, deeply immersed in a well-developed stroma.
|
|||
|
|
</paragraph>
|
|||
|
|
<paragraph blockId="22.[130,776,1331,1422]" pageId="22" pageNumber="41">
|
|||
|
|
<emphasis bold="true" box="[130,239,1331,1357]" pageId="22" pageNumber="41">Peridium.</emphasis>
|
|||
|
|
12-20 µm thick around the pycnidial venter, onelayered, yellow-brown to brown, composed of polygonal, cells with thick walls forming textura angularis.
|
|||
|
|
</paragraph>
|
|||
|
|
<paragraph blockId="22.[132,776,1459,1517]" pageId="22" pageNumber="41">
|
|||
|
|
<emphasis bold="true" box="[132,299,1459,1485]" pageId="22" pageNumber="41">Conidiophores.</emphasis>
|
|||
|
|
35-50 × 2-4 µm, 0-2-septate, cylindrical, hyaline, simple or branched, with one or more conidiogenous cells.
|
|||
|
|
</paragraph>
|
|||
|
|
<paragraph blockId="22.[130,775,1554,1644]" pageId="22" pageNumber="41">
|
|||
|
|
<emphasis bold="true" box="[130,352,1554,1581]" pageId="22" pageNumber="41">Conidiogenous cells.</emphasis>
|
|||
|
|
20-25 × 2.5-3.5 µm, hyaline, unicellular, with wide base and tapering tip, producing one conidium, determinate, conidiogenesis holoblastic.
|
|||
|
|
</paragraph>
|
|||
|
|
<paragraph blockId="22.[132,775,1682,1772]" pageId="22" pageNumber="41">
|
|||
|
|
<emphasis bold="true" box="[132,229,1682,1708]" pageId="22" pageNumber="41">Conidia.</emphasis>
|
|||
|
|
24-35 × 1-1.5 µm (ẍ = 36 × 2 µm, n = 30), onecelled, filiform, straight, curved or hook-like, hyaline to yellowish and apricot in mass.
|
|||
|
|
</paragraph>
|
|||
|
|
</subSubSection>
|
|||
|
|
<subSubSection pageId="22" pageNumber="41" type="discussion">
|
|||
|
|
<paragraph blockId="22.[132,206,1810,1836]" box="[132,206,1810,1836]" pageId="22" pageNumber="41">
|
|||
|
|
<heading box="[132,206,1810,1836]" fontSize="9" level="3" pageId="22" pageNumber="41" reason="5">NOTES</heading>
|
|||
|
|
</paragraph>
|
|||
|
|
<paragraph blockId="22.[130,776,1841,2028]" lastBlockId="22.[811,1456,693,1294]" pageId="22" pageNumber="41">
|
|||
|
|
<taxonomicName authority="Dayarathne & K.D.Hyde" authorityName="Dayarathne & K. D. Hyde" authorityYear="2020" box="[132,675,1841,1868]" class="Dothideomycetes" family="Didymellaceae" genus="Cryptosphaeria" kingdom="Fungi" order="Pleosporales" pageId="22" pageNumber="41" phylum="Ascomycota" rank="species" species="halophila" status="sp. nov.">
|
|||
|
|
<emphasis box="[132,391,1841,1867]" italics="true" pageId="22" pageNumber="41">Cryptosphaeria halophila</emphasis>
|
|||
|
|
Dayarathne & K.D.Hyde
|
|||
|
|
</taxonomicName>
|
|||
|
|
,
|
|||
|
|
<taxonomicNameLabel box="[687,771,1842,1868]" pageId="22" pageNumber="41" rank="species">sp. nov.</taxonomicNameLabel>
|
|||
|
|
, is the first record of an asexual morph in this genus, reported from a marine habitat.
|
|||
|
|
<taxonomicName authorityName="Hu" authorityYear="1971" box="[366,461,1905,1931]" class="Sordariomycetes" family="Diatrypaceae" genus="Libertella" kingdom="Fungi" order="Xylariales" pageId="22" pageNumber="41" phylum="Ascomycota" rank="genus">
|
|||
|
|
<emphasis box="[366,461,1905,1931]" italics="true" pageId="22" pageNumber="41">Libertella</emphasis>
|
|||
|
|
</taxonomicName>
|
|||
|
|
-like asexual morphs have been reported from host substrates and axenic cultures in previous studies by
|
|||
|
|
<bibRefCitation author="TROUILLAS F. P. & HAND F. P. & INDERBITZIN P. & GUBLER W. D." box="[246,480,1969,1996]" pageId="22" pageNumber="41" pagination="1304 - 1313" refId="ref31129" refString="TROUILLAS F. P., HAND F. P., INDERBITZIN P. & GUBLER W. D. 2015. - The genus Cryptosphaeria in the western United States: taxonomy, multilocus phylogeny and a new species, C. multicontinentalis. Mycologia 107: 1304 - 1313. https: // doi. org / 10.3852 / 15 - 115" type="journal article" year="2015">
|
|||
|
|
Trouillas
|
|||
|
|
<emphasis box="[347,399,1969,1995]" italics="true" pageId="22" pageNumber="41">et al.</emphasis>
|
|||
|
|
(2015)
|
|||
|
|
</bibRefCitation>
|
|||
|
|
and
|
|||
|
|
<bibRefCitation author="MEHRABI M. & HEMMATI R. & VASILYEVA L. N. & TROUILLAS F. P." box="[536,770,1969,1996]" pageId="22" pageNumber="41" pagination="43 - 55" refId="ref29070" refString="MEHRABI M., HEMMATI R., VASILYEVA L. N. & TROUILLAS F. P. 2016. - Diatrypella macrospora sp. nov. and new records of diatrypaceous fungi from Iran. Phytotaxa 252: 43 - 55. https: // doi. org / 10.11646 / phytotaxa. 252.1.4" type="journal article" year="2016">
|
|||
|
|
Mehrabi
|
|||
|
|
<emphasis box="[635,687,1969,1995]" italics="true" pageId="22" pageNumber="41">et al.</emphasis>
|
|||
|
|
(2016)
|
|||
|
|
</bibRefCitation>
|
|||
|
|
. In our phylogenetic analyses (ML and BI) with combined SSU+LSU sequence data, this species grouped with
|
|||
|
|
<taxonomicName class="Dothideomycetes" family="Didymellaceae" genus="Cryptosphaeria" kingdom="Fungi" order="Pleosporales" pageId="22" pageNumber="41" phylum="Ascomycota" rank="species" species="ligniota">
|
|||
|
|
<emphasis italics="true" pageId="22" pageNumber="41">Cr. ligniota</emphasis>
|
|||
|
|
</taxonomicName>
|
|||
|
|
and
|
|||
|
|
<taxonomicName box="[914,1084,725,752]" class="Dothideomycetes" family="Didymellaceae" genus="Cryptosphaeria" kingdom="Fungi" order="Pleosporales" pageId="22" pageNumber="41" phylum="Ascomycota" rank="species" species="pullmanensis">
|
|||
|
|
<emphasis box="[914,1084,725,752]" italics="true" pageId="22" pageNumber="41">Cr. pullmanensis</emphasis>
|
|||
|
|
</taxonomicName>
|
|||
|
|
as a separate lineage, but with poor bootstrap support (
|
|||
|
|
<figureCitation box="[1018,1078,757,783]" captionStart="FIG" captionStartId="14.[132,143,1281,1299]" captionTargetBox="[353,1235,215,1235]" captionTargetId="graphics-386@14.[352,1235,215,1221]" captionTargetPageId="14" captionText="FIG. 3. — Phylogram generated from the best scoring RAxML tree based on combined LSU and SSU sequence data. Bootstrap support values for maximum likelihood (ML, blue) equal or greater than 60 % are given above the nodes. Bayesian posterior probabilities (PP, green) equal or greater than 0.90 are shown above the branches. The tree is rooted to Xylaria hypoxylon (OCS 100004) and Xylaria acuta (5089). All sequences from ex-type strains are in bold. Scale bar: 0.02 (expected number of nucleotide substitutions per site per branch)." figureDoi="http://doi.org/10.5281/zenodo.7815053" httpUri="https://zenodo.org/record/7815053/files/figure.png" pageId="22" pageNumber="41">Fig. 3</figureCitation>
|
|||
|
|
). MP results showed that this novel species nested with
|
|||
|
|
<taxonomicName authority="Devadatha & V.V.Sarma" authorityName=", Devadatha & V. V. Sarma" authorityYear="2020" class="Dothideomycetes" family="Didymellaceae" genus="Cryptosphaeria" kingdom="Fungi" order="Pleosporales" pageId="22" pageNumber="41" phylum="Ascomycota" rank="species" species="avicenniae" status="sp. nov.">
|
|||
|
|
<emphasis box="[1029,1301,789,815]" italics="true" pageId="22" pageNumber="41">Cryptosphaeria avicenniae</emphasis>
|
|||
|
|
Devadatha & V.V.Sarma
|
|||
|
|
</taxonomicName>
|
|||
|
|
,
|
|||
|
|
<taxonomicNameLabel box="[943,1029,822,848]" pageId="22" pageNumber="41" rank="species">sp. nov.</taxonomicNameLabel>
|
|||
|
|
, with no support (
|
|||
|
|
<figureCitation box="[1239,1303,821,847]" captionStart="FIG" captionStartId="15.[132,143,1283,1301]" captionTargetBox="[320,1236,187,1255]" captionTargetId="graphics-404@15.[351,1236,215,1221]" captionTargetPageId="15" captionText="FIG. 4. — Phylogram generated from the best scoring MP tree based on combined LSU and SSU sequence data. Bootstrap support values for maximum parsimony (MP) equal or greater than 60 % are given above the nodes. The tree is rooted to Xylaria hypoxylon (OCS 100004) and Xylaria acuta (5089). Scale bar: 50 (expected number of nucleotide substitutions per site per branch)." figureDoi="http://doi.org/10.5281/zenodo.7815055" httpUri="https://zenodo.org/record/7815055/files/figure.png" pageId="22" pageNumber="41">Fig. 4</figureCitation>
|
|||
|
|
). The asexual morph of
|
|||
|
|
<taxonomicName authority="Devadatha & V.V.Sarma" authorityName=", Devadatha & V. V. Sarma" authorityYear="2020" box="[916,1451,853,879]" class="Dothideomycetes" family="Didymellaceae" genus="Cryptosphaeria" kingdom="Fungi" order="Pleosporales" pageId="22" pageNumber="41" phylum="Ascomycota" rank="species" species="avicenniae" status="sp. nov.">
|
|||
|
|
<emphasis box="[916,1182,853,879]" italics="true" pageId="22" pageNumber="41">Cryptosphaeria avicenniae</emphasis>
|
|||
|
|
Devadatha & V.V.Sarma
|
|||
|
|
</taxonomicName>
|
|||
|
|
,
|
|||
|
|
<taxonomicNameLabel box="[811,895,885,911]" pageId="22" pageNumber="41" rank="species">sp. nov.</taxonomicNameLabel>
|
|||
|
|
, is similar to
|
|||
|
|
<taxonomicName authority="Dayarathne & K.D.Hyde" authorityName="Dayarathne & K. D. Hyde" authorityYear="2020" class="Dothideomycetes" family="Didymellaceae" genus="Cryptosphaeria" kingdom="Fungi" order="Pleosporales" pageId="22" pageNumber="41" phylum="Ascomycota" rank="species" species="halophila" status="sp. nov.">
|
|||
|
|
<emphasis box="[1035,1293,885,911]" italics="true" pageId="22" pageNumber="41">Cryptosphaeria halophila</emphasis>
|
|||
|
|
Dayarathne & K.D.Hyde
|
|||
|
|
</taxonomicName>
|
|||
|
|
,
|
|||
|
|
<taxonomicNameLabel box="[942,1028,917,943]" pageId="22" pageNumber="41" rank="species">sp. nov.</taxonomicNameLabel>
|
|||
|
|
, and
|
|||
|
|
<taxonomicName authorityName="Dayarathne & Wanasinghe & Devadatha & Abeywickrama & G & Jones & Chomnunti & Sarma & Hyde & Lumyong & C. & Mckenzie" authorityYear="2020" baseAuthorityName="Dayarathne & Wanasinghe & Devadatha & Abeywickrama & G & Jones & Chomnunti & Sarma & Hyde & Lumyong & C. & Mckenzie" baseAuthorityYear="2020" box="[1092,1372,917,943]" class="Sordariomycetes" family="Diatrypaceae" genus="Halocryptovalsa" higherTaxonomySource="CoL" kingdom="Fungi" order="Xylariales" pageId="22" pageNumber="41" phylum="Ascomycota" rank="species" species="avicenniae" status="comb. nov.">
|
|||
|
|
<emphasis box="[1092,1372,917,943]" italics="true" pageId="22" pageNumber="41">Halocryptovalsa avicenniae</emphasis>
|
|||
|
|
</taxonomicName>
|
|||
|
|
,
|
|||
|
|
<taxonomicNameLabel pageId="22" pageNumber="41" rank="species">comb. nov.</taxonomicNameLabel>
|
|||
|
|
(synonym of
|
|||
|
|
<taxonomicName box="[1019,1261,949,975]" class="Sordariomycetes" family="Diatrypaceae" genus="Cryptovalsa" kingdom="Fungi" order="Xylariales" pageId="22" pageNumber="41" phylum="Ascomycota" rank="species" species="avicenniae">
|
|||
|
|
<emphasis box="[1019,1261,949,975]" italics="true" pageId="22" pageNumber="41">Cryptovalsa avicenniae</emphasis>
|
|||
|
|
</taxonomicName>
|
|||
|
|
) in conidiomatal and conidial morphology. However, our phylogenetic analyses showed that they are phylogenetically distinct (
|
|||
|
|
<figureCitation box="[1351,1442,1012,1039]" captionStart-0="FIG" captionStart-1="FIG" captionStartId-0="14.[132,143,1281,1299]" captionStartId-1="15.[132,143,1283,1301]" captionTargetBox-0="[353,1235,215,1235]" captionTargetBox-1="[320,1236,187,1255]" captionTargetId-0="graphics-386@14.[352,1235,215,1221]" captionTargetId-1="graphics-404@15.[351,1236,215,1221]" captionTargetPageId-0="14" captionTargetPageId-1="15" captionText-0="FIG. 3. — Phylogram generated from the best scoring RAxML tree based on combined LSU and SSU sequence data. Bootstrap support values for maximum likelihood (ML, blue) equal or greater than 60 % are given above the nodes. Bayesian posterior probabilities (PP, green) equal or greater than 0.90 are shown above the branches. The tree is rooted to Xylaria hypoxylon (OCS 100004) and Xylaria acuta (5089). All sequences from ex-type strains are in bold. Scale bar: 0.02 (expected number of nucleotide substitutions per site per branch)." captionText-1="FIG. 4. — Phylogram generated from the best scoring MP tree based on combined LSU and SSU sequence data. Bootstrap support values for maximum parsimony (MP) equal or greater than 60 % are given above the nodes. The tree is rooted to Xylaria hypoxylon (OCS 100004) and Xylaria acuta (5089). Scale bar: 50 (expected number of nucleotide substitutions per site per branch)." figureDoi-0="http://doi.org/10.5281/zenodo.7815053" figureDoi-1="http://doi.org/10.5281/zenodo.7815055" httpUri-0="https://zenodo.org/record/7815053/files/figure.png" httpUri-1="https://zenodo.org/record/7815055/files/figure.png" pageId="22" pageNumber="41">Figs 3-4</figureCitation>
|
|||
|
|
). No cultures were obtained for this species since conidia did not germinate on any culture media used (WA, MEA/PDA, seawater MEA/PDA or CMA). We did not obtain ITS and Btub sequence data for this species by direct sequencing of fresh fruiting bodies, after several attempts with different temperature profiles. Hence, further taxon sampling, isolation and sequence data are required to further confirm phylogenetic placement of this taxon within this genus.
|
|||
|
|
</paragraph>
|
|||
|
|
</subSubSection>
|
|||
|
|
</treatment>
|
|||
|
|
</document>
|