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<document id="4DFE1EB10568E021AFC77420605A2D23" ID-DOI="10.1099/ijsem.0.004107" ID-ISSN="1466-5034" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.taxonomicNames_approvedBy="felipe" checkinTime="1644597203828" checkinUser="felipe" docAuthor="Zheng, Jinshui, Wittouck, Stijn, Salvetti, Elisa, Franz, Charles M. A. P., Harris, Hugh M. B., Mattarelli, Paola, O’Toole, Paul W., Pot, Bruno, Vandamme, Peter, Walter, Jens, Watanabe, Koichi, Wuyts, Sander, Felis, Giovanna E., Gänzle, Michael G. & Lebeer, Sarah" docDate="2020" docId="0389878AFFB82147DA0BF98CFDCD634D" docLanguage="en" docName="IntJSystEvolMicrobiol.70.4.2782-2858.pdf" docOrigin="International Journal of Systematic and Evolutionary Microbiology 70 (4)" docSource="http://dx.doi.org/10.1099/ijsem.0.004107" docStyle="DocumentStyle:C64F0A4F4C66F6FC2AD4ED89351C6242.3:IntJSystEvolMicrobiol.2017-.journal_article" docStyleId="C64F0A4F4C66F6FC2AD4ED89351C6242" docStyleName="IntJSystEvolMicrobiol.2017-.journal_article" docStyleVersion="3" docTitle="Secundilactobacillus pentosiphilus Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O’Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Gänzle & Lebeer, 2020, COMB. NOV." docType="treatment" docVersion="4" lastPageNumber="2836" masterDocId="FFB0FFF2FF8D2171D937FF96FFAF6267" masterDocTitle="A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae" masterLastPageNumber="2858" masterPageNumber="2782" pageNumber="2835" updateTime="1699295455673" updateUser="plazi">
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<mods:title id="95DB71F7C24922FEF4332B8709C00FD2">A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae</mods:title>
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<mods:namePart id="BCA906D0C57321C86F71D76FAD83B433">Zheng, Jinshui</mods:namePart>
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<mods:namePart id="3A34D0FC6150947DD26BFEC78C4AC4B3">Wittouck, Stijn</mods:namePart>
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<mods:namePart id="5BA2A707AE28631294EB19A7EFA25544">Salvetti, Elisa</mods:namePart>
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<mods:namePart id="47414F87E9BDD398C78BEDC6369C0EAC">Franz, Charles M. A. P.</mods:namePart>
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<mods:namePart id="4C8C5DF65C1CA3AC21CE1EF5F5C13491">Harris, Hugh M. B.</mods:namePart>
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<mods:namePart id="5D28848E0D6F1EDAC948849AF8037884">Mattarelli, Paola</mods:namePart>
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<mods:namePart id="2EE8DB20CCCEB20D51BCC428A0AF1A09">O’Toole, Paul W.</mods:namePart>
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<mods:namePart id="86D19AF008137BF77641B0982E5FD3A3">Pot, Bruno</mods:namePart>
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<mods:namePart id="2D1BCF90F4AB5A7A0B62EEE85EED14DC">Vandamme, Peter</mods:namePart>
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<mods:namePart id="0A2F7CB68968F513AA405F90F4640951">Walter, Jens</mods:namePart>
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<mods:namePart id="ECB1B91CC953444294B6CCFD9AF3ECB8">Watanabe, Koichi</mods:namePart>
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<mods:namePart id="78783E52DF7C15F952785F0FAFDC2BF2">Wuyts, Sander</mods:namePart>
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<mods:namePart id="BE9BEDA18BD20EFF8739538C696AD30B">Felis, Giovanna E.</mods:namePart>
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<mods:namePart id="FE6AC9DF60EEA96181C77BA1DFE2C84C">Gänzle, Michael G.</mods:namePart>
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<mods:typeOfResource id="487FC1F55839121AC75881D160CEEEE1">text</mods:typeOfResource>
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<mods:title id="F488CA60172DB62FC4F5E00E2B2976C4">International Journal of Systematic and Evolutionary Microbiology</mods:title>
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<mods:part id="7AD9EB6C742E4EF042A779478DAA1F87">
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<mods:date id="1348F9F743021E02925E30473C0967CA">2020</mods:date>
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<mods:number id="17B8CAC2D5470EBA2900CEFB38DF8906">2020-04-01</mods:number>
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<mods:number id="4D7102490EAF824AE741297883973BEC">70</mods:number>
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<mods:number id="AF5CD704A8B9BCB1B6F4B49CAE35AC9D">4</mods:number>
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<mods:start id="B61944337A29FE62620C372D608C7F93">2782</mods:start>
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<mods:url id="910588985AE092D33206365C1945D6E1">http://dx.doi.org/10.1099/ijsem.0.004107</mods:url>
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<mods:identifier id="8FB5DE60836033E0D521FE4E89A0CD3A" type="ISSN">1466-5034</mods:identifier>
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<treatment id="0389878AFFB82147DA0BF98CFDCD634D" ID-DOI="http://doi.org/10.5281/zenodo.6309997" ID-Zenodo-Dep="6309997" LSID="urn:lsid:plazi:treatment:0389878AFFB82147DA0BF98CFDCD634D" httpUri="http://treatment.plazi.org/id/0389878AFFB82147DA0BF98CFDCD634D" lastPageId="54" lastPageNumber="2836" pageId="53" pageNumber="2835">
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<subSubSection id="C33A6517FFB82144DA0BF98CFB66643B" pageId="53" pageNumber="2835" type="nomenclature">
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<paragraph id="8B9F369CFFB82144DA0BF98CFB66643B" blockId="53.[826,1473,1562,1956]" pageId="53" pageNumber="2835">
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<heading id="D0D781F0FFB82144DA0BF98CFB66643B" allCaps="true" bold="true" fontSize="12" level="2" pageId="53" pageNumber="2835" reason="3">
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<emphasis id="B954EA8EFFB82144DA0BF98CFB66643B" bold="true" pageId="53" pageNumber="2835">
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DESCRIPTION OF
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<taxonomicName id="4C204D1FFFB82144DD02F98CFBB3643B" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" class="Bacilli" family="Lactobacillaceae" genus="Secundilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="53" pageNumber="2835" phylum="Firmicutes" rank="species" species="pentosiphilus" status="comb. nov.">
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<emphasis id="B954EA8EFFB82144DD02F98CFBB3643B" bold="true" italics="true" pageId="53" pageNumber="2835">SECUNDILACTOBACILLUS PENTOSIPHILUS</emphasis>
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</taxonomicName>
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<taxonomicNameLabel id="A26757F5FFB82144DD13F9A9FB66643B" box="[1060,1225,1599,1628]" pageId="53" pageNumber="2835" rank="species">COMB. NOV.</taxonomicNameLabel>
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</emphasis>
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection id="C33A6517FFB82144DA0BF9FFFAB264D8" pageId="53" pageNumber="2835" type="etymology">
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<paragraph id="8B9F369CFFB82144DA0BF9FFFAB264D8" blockId="53.[826,1473,1562,1956]" pageId="53" pageNumber="2835">
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<taxonomicName id="4C204D1FFFB82144DA0BF9FFFB3964E6" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" box="[828,1174,1641,1665]" class="Bacilli" family="Lactobacillaceae" genus="Secundilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="53" pageNumber="2835" phylum="Firmicutes" rank="species" species="pentosiphilus">
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<emphasis id="B954EA8EFFB82144DA0BF9FFFB3964E6" box="[828,1174,1641,1665]" italics="true" pageId="53" pageNumber="2835">Secundilactobacillus pentosiphilus</emphasis>
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</taxonomicName>
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(pen.to.si’phi.lus. N.L. neut. n.
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<emphasis id="B954EA8EFFB82144DA62F91FFC1664C7" box="[853,953,1673,1696]" italics="true" pageId="53" pageNumber="2835">pentosum</emphasis>
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pentose; Gr. masc. adj. philos, friend, loving; N.L. masc. adj.
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<taxonomicName id="4C204D1FFFB82144DA9DF931FB9D64D8" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" box="[938,1074,1703,1727]" class="Bacilli" family="Lactobacillaceae" genus="Secundilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="53" pageNumber="2835" phylum="Firmicutes" rank="species" species="pentosiphilus">
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<emphasis id="B954EA8EFFB82144DA9DF931FB9D64D8" box="[938,1074,1703,1727]" italics="true" pageId="53" pageNumber="2835">pentosiphilus</emphasis>
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</taxonomicName>
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, preferring pentoses).
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</paragraph>
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</subSubSection>
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<subSubSection id="C33A6517FFB82144DA0BF943FBBD65C3" pageId="53" pageNumber="2835" type="description">
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<paragraph id="8B9F369CFFB82144DA0BF943FA156486" blockId="53.[826,1473,1562,1956]" box="[828,1466,1747,1773]" pageId="53" pageNumber="2835">
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Basonym:
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<taxonomicName id="4C204D1FFFB82144DA90F942FAC3648A" authority="Tohno et al. 2017" authorityName="Tohno" authorityYear="2017" box="[935,1388,1748,1773]" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="53" pageNumber="2835" phylum="Firmicutes" rank="species" species="pentosiphilus">
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<emphasis id="B954EA8EFFB82144DA90F942FB18648B" box="[935,1207,1748,1772]" italics="true" pageId="53" pageNumber="2835">Lactobacillus pentosiphilus</emphasis>
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Tohno
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<emphasis id="B954EA8EFFB82144DC33F943FA81648B" box="[1284,1326,1748,1772]" italics="true" pageId="53" pageNumber="2835">et al</emphasis>
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. 2017
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</taxonomicName>
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, 3643
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<superScript id="7C559BD4FFB82144DC90F945FA156486" attach="none" box="[1447,1466,1747,1761]" fontSize="6" pageId="53" pageNumber="2835">VP</superScript>
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|||
|
|
</paragraph>
|
|||
|
|
<paragraph id="8B9F369CFFB82144DA0BF894FA026511" blockId="53.[826,1473,1562,1956]" pageId="53" pageNumber="2835">
|
|||
|
|
Strains of this species do not produce acid or gas from hexoses including glucose but ferment pentoses; growth is observed between 30 and 37 °C [
|
|||
|
|
<bibRefCitation id="EFB14B6DFFB82144DD76F8A9FBDF6530" author="Tohno M & Tanizawa Y & Irisawa T & Masuda T & Sakamoto M" box="[1089,1136,1855,1879]" pageId="53" pageNumber="2835" pagination="3639 - 3644" refId="ref72408" refString="286. Tohno M, Tanizawa Y, Irisawa T, Masuda T, Sakamoto M et al. Lactobacillus silagincola sp. nov. and Lactobacillus pentosiphilus sp. nov., isolated from silage. Int J Syst Evol Microbiol 2017; 67: 3639 - 3644." type="journal article" year="2017">286</bibRefCitation>
|
|||
|
|
]. The genome size of the
|
|||
|
|
<typeStatus id="549B883EFFB82144DCBAF8D6FA13653F" box="[1421,1468,1856,1880]" pageId="53" pageNumber="2835">type</typeStatus>
|
|||
|
|
strain is 2.63 Mbp. The mol% G+C content of DNA is 44.9.
|
|||
|
|
</paragraph>
|
|||
|
|
<paragraph id="8B9F369CFFB82144DA0BF81AFBBD65C3" blockId="53.[826,1473,1562,1956]" box="[828,1042,1932,1956]" pageId="53" pageNumber="2835">Isolated from silage.</paragraph>
|
|||
|
|
</subSubSection>
|
|||
|
|
<subSubSection id="C33A6517FFBB2147D94EFF21FDCD634D" pageId="54" pageNumber="2836" type="materials_examined">
|
|||
|
|
<paragraph id="8B9F369CFFBB2147D94EFF21FD11629A" blockId="54.[121,733,181,299]" pageId="54" pageNumber="2836">
|
|||
|
|
<materialsCitation id="3B483CC1FFBB2147D94EFF21FD7862A4" accessionNumber="JCM 31145" box="[121,727,181,207]" collectionCode="T, JCM" pageId="54" pageNumber="2836" specimenCode="DSM 102974" specimenCount="1" typeStatus="holotype">
|
|||
|
|
The
|
|||
|
|
<typeStatus id="549B883EFFBB2147D990FF21FF7A62A8" box="[167,213,183,207]" pageId="54" pageNumber="2836">type</typeStatus>
|
|||
|
|
strain is IWT25
|
|||
|
|
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<collectionCode id="ED31AE59FFBB2147D8B5FF23FE2362A4" box="[386,396,181,195]" name="Tavera, Department of Geology and Geophysics" pageId="54" pageNumber="2836">T</collectionCode>
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|||
|
|
</superScript>
|
|||
|
|
=
|
|||
|
|
<collectionCode id="ED31AE59FFBB2147D890FF21FE7662A8" box="[423,473,183,207]" country="Japan" httpUri="http://grbio.org/cool/iyky-md37" name="Japan Collection of Microorganisms" pageId="54" pageNumber="2836">JCM</collectionCode>
|
|||
|
|
31145
|
|||
|
|
<superScript id="7C559BD4FFBB2147DB17FF23FD8562A4" attach="left" box="[544,554,181,195]" fontSize="6" pageId="54" pageNumber="2836">
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<collectionCode id="ED31AE59FFBB2147DB17FF23FD8562A4" box="[544,554,181,195]" name="Tavera, Department of Geology and Geophysics" pageId="54" pageNumber="2836">T</collectionCode>
|
|||
|
|
</superScript>
|
|||
|
|
=
|
|||
|
|
<specimenCode id="DB869EE7FFBB2147DB72FF21FD7F62A8" box="[581,720,183,207]" collectionCode="DSM" country="Germany" httpUri="http://grbio.org/cool/4644-42cg" name="Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH" pageId="54" pageNumber="2836">DSM 102974</specimenCode>
|
|||
|
|
<superScript id="7C559BD4FFBB2147DBF8FF23FD7862A4" attach="none" box="[719,727,181,195]" fontSize="6" pageId="54" pageNumber="2836">
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|||
|
|
<collectionCode id="ED31AE59FFBB2147DBF8FF23FD7862A4" box="[719,727,181,195]" name="Tavera, Department of Geology and Geophysics" pageId="54" pageNumber="2836">T</collectionCode>
|
|||
|
|
</superScript>
|
|||
|
|
</materialsCitation>
|
|||
|
|
. Genome sequence accession number:
|
|||
|
|
<collectionCode id="ED31AE59FFBB2147DB39FF73FDFF629A" box="[526,592,229,253]" pageId="54" pageNumber="2836">BCMI</collectionCode>
|
|||
|
|
00000000.
|
|||
|
|
</paragraph>
|
|||
|
|
<paragraph id="8B9F369CFFBB2147D94EFE84FDCD634D" blockId="54.[121,733,181,299]" box="[121,610,274,299]" pageId="54" pageNumber="2836">
|
|||
|
|
<materialsCitation id="3B483CC1FFBB2147D94EFE84FDF1634D" accessionNumber="LC085284" box="[121,606,274,299]" pageId="54" pageNumber="2836" specimenCount="1">
|
|||
|
|
16S rRNA gene accession number:
|
|||
|
|
<accessionNumber id="9473AB7FFFBB2147D8D9FE84FDF1634D" box="[494,606,274,298]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/LC085284" pageId="54" pageNumber="2836">LC085284</accessionNumber>
|
|||
|
|
</materialsCitation>
|
|||
|
|
.
|
|||
|
|
</paragraph>
|
|||
|
|
</subSubSection>
|
|||
|
|
</treatment>
|
|||
|
|
</document>
|