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<document id="B010673E337602F26284958C60A1CA7F" ID-DOI="10.1099/ijsem.0.004107" ID-ISSN="1466-5034" IM.materialsCitations_approvedBy="felipe" IM.metadata_approvedBy="felipe" IM.taxonomicNames_approvedBy="felipe" checkinTime="1644597203828" checkinUser="felipe" docAuthor="Zheng, Jinshui, Wittouck, Stijn, Salvetti, Elisa, Franz, Charles M. A. P., Harris, Hugh M. B., Mattarelli, Paola, O’Toole, Paul W., Pot, Bruno, Vandamme, Peter, Walter, Jens, Watanabe, Koichi, Wuyts, Sander, Felis, Giovanna E., Gänzle, Michael G. & Lebeer, Sarah" docDate="2020" docId="0389878AFFB0214CDA0BFADFFA87653B" docLanguage="en" docName="IntJSystEvolMicrobiol.70.4.2782-2858.pdf" docOrigin="International Journal of Systematic and Evolutionary Microbiology 70 (4)" docSource="http://dx.doi.org/10.1099/ijsem.0.004107" docStyle="DocumentStyle:C64F0A4F4C66F6FC2AD4ED89351C6242.3:IntJSystEvolMicrobiol.2017-.journal_article" docStyleId="C64F0A4F4C66F6FC2AD4ED89351C6242" docStyleName="IntJSystEvolMicrobiol.2017-.journal_article" docStyleVersion="3" docTitle="Apilactobacillus timberlakei Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O’Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Gänzle & Lebeer, 2020, COMB. NOV." docType="treatment" docVersion="4" lastPageNumber="2843" masterDocId="FFB0FFF2FF8D2171D937FF96FFAF6267" masterDocTitle="A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae" masterLastPageNumber="2858" masterPageNumber="2782" pageNumber="2843" updateTime="1699295455673" updateUser="plazi">
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<mods:title id="868E7F31A74E99E3D2E1DF6A2D9B6632">A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae</mods:title>
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<mods:namePart id="2A32EB44939012F4BAF65E588C9E5335">Zheng, Jinshui</mods:namePart>
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<mods:namePart id="D8E5EAE23B4584F71672500A4C280B19">Wittouck, Stijn</mods:namePart>
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<mods:namePart id="260236F8D6F9AAFE70AC23C668FF2223">Salvetti, Elisa</mods:namePart>
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<mods:namePart id="27848A25EC7F8B5B57AE37CF6B2F7DC2">Franz, Charles M. A. P.</mods:namePart>
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<mods:namePart id="CD88AF194745DE8C69D7335C517A0015">Harris, Hugh M. B.</mods:namePart>
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<mods:namePart id="22CEC3EF81A33325DC79E5921DCBC07B">Mattarelli, Paola</mods:namePart>
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<mods:namePart id="F63A32829F314EB8FB80298182A55119">O’Toole, Paul W.</mods:namePart>
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<mods:namePart id="6D5ADDCD38164BC4220E4F18319A9162">Pot, Bruno</mods:namePart>
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<mods:namePart id="FFE30444B55BF499AC2689284AB88DA9">Vandamme, Peter</mods:namePart>
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<mods:namePart id="5C3757291E3DDB456144E0556CFFEBA3">Walter, Jens</mods:namePart>
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<mods:namePart id="B4E5C6EDF680AE80D8052B14E7D063F4">Watanabe, Koichi</mods:namePart>
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<mods:namePart id="F72B8483ADBF4B9052CA8AA78D61C8BA">Wuyts, Sander</mods:namePart>
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<mods:namePart id="6A79B7C11FBF0D3A9554ED14A62E1914">Felis, Giovanna E.</mods:namePart>
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<mods:namePart id="38F16AB5A5C2D7A7336C141E856C21B1">Gänzle, Michael G.</mods:namePart>
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<mods:title id="8F7ADA32252B38E8084EA6B2FB4F3063">International Journal of Systematic and Evolutionary Microbiology</mods:title>
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<mods:part id="FB29941954260BAAE286EEF2277EEB05">
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<mods:date id="91B96F5FEABF984C5B0B2B04E09BE953">2020</mods:date>
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<mods:number id="63E34222CE630845D8783D4973F92E6D">2020-04-01</mods:number>
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<mods:number id="ECAA69348AD5AA677804E1369B3E5991">70</mods:number>
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<mods:number id="9C2ECA4704E3944B23309F8C06FEF0B9">4</mods:number>
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<mods:url id="9CC64BB799EC680CA95C4783E49EA0EB">http://dx.doi.org/10.1099/ijsem.0.004107</mods:url>
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<treatment id="0389878AFFB0214CDA0BFADFFA87653B" ID-DOI="http://doi.org/10.5281/zenodo.6310093" ID-Zenodo-Dep="6310093" LSID="urn:lsid:plazi:treatment:0389878AFFB0214CDA0BFADFFA87653B" httpUri="http://treatment.plazi.org/id/0389878AFFB0214CDA0BFADFFA87653B" lastPageNumber="2843" pageId="61" pageNumber="2843">
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<subSubSection id="C33A6517FFB0214CDA0BFADFFB0867EC" pageId="61" pageNumber="2843" type="nomenclature">
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<paragraph id="8B9F369CFFB0214CDA0BFADFFB0867EC" blockId="61.[826,1467,1353,1885]" pageId="61" pageNumber="2843">
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<heading id="D0D781F0FFB0214CDA0BFADFFB0867EC" allCaps="true" bold="true" fontSize="12" level="2" pageId="61" pageNumber="2843" reason="3">
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<emphasis id="B954EA8EFFB0214CDA0BFADFFB0867EC" bold="true" pageId="61" pageNumber="2843">
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DESCRIPTION OF
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<taxonomicName id="4C204D1FFFB0214CDD02FADFFC5567EC" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" class="Bacilli" family="Lactobacillaceae" genus="Apilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="61" pageNumber="2843" phylum="Firmicutes" rank="species" species="timberlakei" status="comb. nov.">
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<emphasis id="B954EA8EFFB0214CDD02FADFFC5567EC" bold="true" italics="true" pageId="61" pageNumber="2843">APILACTOBACILLUS TIMBERLAKEI</emphasis>
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</taxonomicName>
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<taxonomicNameLabel id="A26757F5FFB0214CDD35FAF8FB0867EC" box="[1026,1191,1390,1419]" pageId="61" pageNumber="2843" rank="species">COMB. NOV.</taxonomicNameLabel>
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</emphasis>
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</heading>
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</paragraph>
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</subSubSection>
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<subSubSection id="C33A6517FFB0214CDA0BFA0EFC4E6789" pageId="61" pageNumber="2843" type="etymology">
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<paragraph id="8B9F369CFFB0214CDA0BFA0EFC4E6789" blockId="61.[826,1467,1353,1885]" pageId="61" pageNumber="2843">
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<taxonomicName id="4C204D1FFFB0214CDA0BFA0EFBF267D7" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" box="[828,1117,1432,1456]" class="Bacilli" family="Lactobacillaceae" genus="Apilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="61" pageNumber="2843" phylum="Firmicutes" rank="species" species="timberlakei">
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<emphasis id="B954EA8EFFB0214CDA0BFA0EFBF267D7" box="[828,1117,1432,1456]" italics="true" pageId="61" pageNumber="2843">Apilactobacillus timberlakei</emphasis>
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</taxonomicName>
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(tim.ber.lake’i. N.L. gen. masc. n.
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<taxonomicName id="4C204D1FFFB0214CDA0BFA21FC1D67A8" authorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" authorityYear="2020" baseAuthorityName="Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" baseAuthorityYear="2020" box="[828,946,1463,1487]" class="Bacilli" family="Lactobacillaceae" genus="Apilactobacillus" higherTaxonomySource="GBIF" kingdom="Bacteria" order="Lactobacillales" pageId="61" pageNumber="2843" phylum="Firmicutes" rank="species" species="timberlakei">
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<emphasis id="B954EA8EFFB0214CDA0BFA21FC1D67A8" box="[828,946,1463,1487]" italics="true" pageId="61" pageNumber="2843">timberlakei</emphasis>
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</taxonomicName>
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names in honor of Philip Timberlake’s work on bee taxonomy).
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</paragraph>
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</subSubSection>
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<subSubSection id="C33A6517FFB0214CDA0BF992FAD16548" pageId="61" pageNumber="2843" type="description">
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<paragraph id="8B9F369CFFB0214CDA0BF992FC2C6448" blockId="61.[826,1467,1353,1885]" pageId="61" pageNumber="2843">
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Basonym:
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<taxonomicName id="4C204D1FFFB0214CDA9BF995FCC0645D" authority="McFrederick et al. 2018" authorityName="McFrederick" authorityYear="2018" class="Bacilli" family="Lactobacillaceae" genus="Lactobacillus" kingdom="Bacteria" order="Lactobacillales" pageId="61" pageNumber="2843" phylum="Firmicutes" rank="species" species="timberlakei">
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<emphasis id="B954EA8EFFB0214CDA9BF995FB1E647C" box="[940,1201,1539,1563]" italics="true" pageId="61" pageNumber="2843">Lactobacillus timberlakei</emphasis>
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McFrederick
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<emphasis id="B954EA8EFFB0214CDC70F992FAD4647C" box="[1351,1403,1539,1563]" italics="true" pageId="61" pageNumber="2843">et al.</emphasis>
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2018, 1884
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</taxonomicName>
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<superScript id="7C559BD4FFB0214CDA58F9B7FC2C6448" attach="left" box="[879,899,1569,1583]" fontSize="6" pageId="61" pageNumber="2843">VP</superScript>
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</paragraph>
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<paragraph id="8B9F369CFFB0214CDA0BF9C6FA8E64E1" blockId="61.[826,1467,1353,1885]" pageId="61" pageNumber="2843">
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Aerotolerant [
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<bibRefCitation id="EFB14B6DFFB0214CDAF8F9C6FC53640F" author="McFrederick QS & Vuong HQ & Rothman JA" box="[975,1020,1616,1640]" pageId="61" pageNumber="2843" pagination="1879 - 1884" refId="ref74006" refString="324. McFrederick QS, Vuong HQ, Rothman JA. Lactobacillus micheneri sp. nov., Lactobacillus timberlakei sp. nov. and Lactobacillus quenuiae sp. nov., lactic acid bacteria isolated from wild bees and flowers. Int J Syst Evol Microbiol 2018; 68: 1879 - 1884." type="journal article" year="2018">324</bibRefCitation>
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]; the genome size of the
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<typeStatus id="549B883EFFB0214CDC37F9C6FA81640F" box="[1280,1326,1616,1640]" pageId="61" pageNumber="2843">type</typeStatus>
|
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strain is 1.54 Mbp. The mol% G+C content of DNA is 30.5.
|
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</paragraph>
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<paragraph id="8B9F369CFFB0214CDA0BF90AFC2164B4" blockId="61.[826,1467,1353,1885]" pageId="61" pageNumber="2843">Isolated as part of the core microbiome of wild bees, and from flowers.</paragraph>
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<paragraph id="8B9F369CFFB0214CDA0BF97FFA1C6567" blockId="61.[826,1467,1353,1885]" box="[828,1459,1767,1793]" pageId="61" pageNumber="2843">
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<materialsCitation id="3B483CC1FFB0214CDA0BF97FFAEA6567" box="[828,1349,1767,1793]" collectionCode="T, NRRL" pageId="61" pageNumber="2843" specimenCode="DSM 104128" specimenCount="1" typeStatus="holotype">
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The
|
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<typeStatus id="549B883EFFB0214CDA5DF97FFC376566" box="[874,920,1769,1793]" pageId="61" pageNumber="2843">type</typeStatus>
|
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|
|
strain is HV_12
|
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|
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<collectionCode id="ED31AE59FFB0214CDD71F971FBFF6492" box="[1094,1104,1767,1781]" name="Tavera, Department of Geology and Geophysics" pageId="61" pageNumber="2843">T</collectionCode>
|
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</superScript>
|
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|
|
=
|
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|
<specimenCode id="DB869EE7FFB0214CDD6AF97FFB466566" box="[1117,1257,1769,1793]" collectionCode="DSM" country="Germany" httpUri="http://grbio.org/cool/4644-42cg" name="Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH" pageId="61" pageNumber="2843">DSM 104128</specimenCode>
|
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|
|
<superScript id="7C559BD4FFB0214CDDDEF971FB5C6492" attach="none" box="[1257,1267,1767,1781]" fontSize="6" pageId="61" pageNumber="2843">
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|
|
<collectionCode id="ED31AE59FFB0214CDDDEF971FB5C6492" box="[1257,1267,1767,1781]" name="Tavera, Department of Geology and Geophysics" pageId="61" pageNumber="2843">T</collectionCode>
|
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|
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</superScript>
|
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|
|
=
|
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|
|
<collectionCode id="ED31AE59FFB0214CDC37F97FFAEA6567" box="[1280,1349,1769,1792]" pageId="61" pageNumber="2843">NRRL</collectionCode>
|
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|
|
</materialsCitation>
|
|||
|
|
B-65472
|
|||
|
|
<superScript id="7C559BD4FFB0214CDC92F971FA026492" attach="none" box="[1445,1453,1767,1781]" fontSize="6" pageId="61" pageNumber="2843">T</superScript>
|
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|
|
.
|
|||
|
|
</paragraph>
|
|||
|
|
<paragraph id="8B9F369CFFB0214CDA0BF881FAD16548" blockId="61.[826,1467,1353,1885]" box="[828,1406,1814,1839]" pageId="61" pageNumber="2843">Genome sequence accession number: POST00000000.</paragraph>
|
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|
|
</subSubSection>
|
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|
|
<subSubSection id="C33A6517FFB0214CDA0BF8D2FA87653B" box="[828,1320,1860,1885]" pageId="61" pageNumber="2843" type="materials_examined">
|
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|
|
<paragraph id="8B9F369CFFB0214CDA0BF8D2FA87653B" blockId="61.[826,1467,1353,1885]" box="[828,1320,1860,1885]" pageId="61" pageNumber="2843">
|
|||
|
|
<materialsCitation id="3B483CC1FFB0214CDA0BF8D2FA8B653B" accessionNumber="KX656650" box="[828,1316,1860,1885]" pageId="61" pageNumber="2843" specimenCount="1">
|
|||
|
|
16S rRNA gene accession number:
|
|||
|
|
<accessionNumber id="9473AB7FFFB0214CDD86F8D2FA8B653B" box="[1201,1316,1860,1884]" httpUri="https://www.ebi.ac.uk/ena/browser/api/embl/KX656650" pageId="61" pageNumber="2843">KX656650</accessionNumber>
|
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|
|
</materialsCitation>
|
|||
|
|
.
|
|||
|
|
</paragraph>
|
|||
|
|
</subSubSection>
|
|||
|
|
</treatment>
|
|||
|
|
</document>
|