94 lines
4.9 KiB
Turtle
94 lines
4.9 KiB
Turtle
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
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@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
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@prefix bibo: <http://purl.org/ontology/bibo/> .
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@prefix cito: <http://purl.org/spar/cito/> .
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@prefix dc: <http://purl.org/dc/elements/1.1/> .
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@prefix dwc: <http://rs.tdwg.org/dwc/terms/> .
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@prefix dwcFP: <http://filteredpush.org/ontologies/oa/dwcFP#> .
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@prefix fabio: <http://purl.org/spar/fabio/> .
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@prefix trt: <http://plazi.org/vocab/treatment#> .
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@prefix xlink: <http://www.w3.org/1999/xlink/> .
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<http://treatment.plazi.org/id/03A2EB6EFFD2FFDDFF063943FA998658>
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cito:cites <http://dx.doi.org/10.5281/zenodo.7848615>, <http://dx.doi.org/10.5281/zenodo.7848609> ;
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dc:creator "Dentinger, BTM; Gaya, E; O'Brien, H; Suz, LM; Lachlan, R; Diaz-Valderrama, JR; Koch, RA; Aime, MC" ;
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dc:title "Pluteineae Dentinger & Gaya & O'Brien & Suz & Lachlan & Diaz-Valderrama & Koch & Aime 2016, subord. nov." ;
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trt:definesTaxonConcept <http://taxon-concept.plazi.org/id/Fungi/Pluteineae_Dentinger_2016> ;
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trt:publishedIn <http://dx.doi.org/10.1111/bij.12553> ;
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a trt:Treatment .
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<http://dx.doi.org/10.1111/bij.12553>
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bibo:endPage "32" ;
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bibo:journal "Biological Journal of the Linnean Society" ;
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bibo:pubDate "2015-03-26" ;
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bibo:startPage "11" ;
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bibo:volume "117" ;
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dc:creator "Dentinger, BTM; Gaya, E; O'Brien, H; Suz, LM; Lachlan, R; Diaz-Valderrama, JR; Koch, RA; Aime, MC" ;
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dc:date "2016" ;
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dc:title "Tales from the crypt: genome mining from fungarium specimens improves resolution of the mushroom tree of life" ;
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fabio:hasPart <http://dx.doi.org/10.5281/zenodo.7848615>, <http://dx.doi.org/10.5281/zenodo.7848609> ;
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a fabio:JournalArticle .
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<http://taxon-concept.plazi.org/id/Fungi/Pluteineae_Dentinger_2016>
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dwc:authority "Dentinger & Gaya & O'Brien & Suz & Lachlan & Diaz-Valderrama & Koch & Aime, 2016" ;
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dwc:authorityName "Dentinger & Gaya & O'Brien & Suz & Lachlan & Diaz-Valderrama & Koch & Aime" ;
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dwc:authorityYear "2016" ;
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dwc:class "Agaricomycetes" ;
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dwc:kingdom "Fungi" ;
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dwc:order "Agaricales" ;
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dwc:phylum "Basidiomycota" ;
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dwc:rank "subOrder" ;
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dwc:scientificNameAuthorship "Dentinger & Gaya & O'Brien & Suz & Lachlan & Diaz-Valderrama & Koch & Aime, 2016" ;
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dwc:subOrder "Pluteineae" ;
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trt:hasTaxonName <http://taxon-name.plazi.org/id/Fungi/Pluteineae> ;
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a dwcFP:TaxonConcept .
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<http://taxon-name.plazi.org/id/Fungi/Pluteineae>
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dwc:class "Agaricomycetes" ;
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dwc:kingdom "Fungi" ;
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dwc:order "Agaricales" ;
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dwc:phylum "Basidiomycota" ;
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dwc:rank "subOrder" ;
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dwc:subOrder "Pluteineae" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Fungi/Agaricales> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Fungi/Agaricales>
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dwc:class "Agaricomycetes" ;
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dwc:kingdom "Fungi" ;
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dwc:order "Agaricales" ;
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dwc:phylum "Basidiomycota" ;
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dwc:rank "order" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Fungi/Agaricomycetes> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Fungi/Agaricomycetes>
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dwc:class "Agaricomycetes" ;
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dwc:kingdom "Fungi" ;
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dwc:phylum "Basidiomycota" ;
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dwc:rank "class" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Fungi/Basidiomycota> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Fungi/Basidiomycota>
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dwc:kingdom "Fungi" ;
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dwc:phylum "Basidiomycota" ;
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dwc:rank "phylum" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Fungi> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Fungi>
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dwc:kingdom "Fungi" ;
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dwc:rank "kingdom" ;
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a dwcFP:TaxonName .
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<http://dx.doi.org/10.5281/zenodo.7848615>
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dc:description "Figure 4. Consensus trees of individual gene trees. Left: extended majority-rule consensus (MRE) tree based on bootstrap replicates of individual gene analyses for all genes with no missing taxa (N = 175). Numbers above branches are internode certainty (IC) and internode certainty all (ICA) values for all individual bootstrap trees compared to the MRE tree. Numbers in bold represent nodes that are not present in the ASTRAL tree (right). Right: coalescentbased consensus tree recovered by ASTRAL using 208 single gene maximum likelihood trees from RAXML analysis. Numbers in bold above branches are IC, ICA values for all individual bootstrap trees that are not present in the MRE tree (left). Numbers below branches are bootstrap supports based on single gene bootstrap analysis (100 replicates each)." ;
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fabio:hasRepresentation <https://zenodo.org/record/7848615/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.7848609>
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dc:description "Figure 2. Summary of data quality. A, distribution of alignment lengths for 208 loci after GBlocks processing. B, correlation of assembly quality (N50) and percent alignment coverage." ;
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fabio:hasRepresentation <https://zenodo.org/record/7848609/files/figure.png> ;
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a fabio:Figure .
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