300 lines
15 KiB
Turtle
300 lines
15 KiB
Turtle
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
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@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
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@prefix bibo: <http://purl.org/ontology/bibo/> .
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@prefix cito: <http://purl.org/spar/cito/> .
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@prefix dc: <http://purl.org/dc/elements/1.1/> .
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@prefix dwc: <http://rs.tdwg.org/dwc/terms/> .
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@prefix dwcFP: <http://filteredpush.org/ontologies/oa/dwcFP#> .
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@prefix fabio: <http://purl.org/spar/fabio/> .
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@prefix trt: <http://plazi.org/vocab/treatment#> .
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@prefix xlink: <http://www.w3.org/1999/xlink/> .
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<http://treatment.plazi.org/id/AC4D691FFFB25E16FF685FF47141F976>
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cito:cites <http://taxon-concept.plazi.org/id/Animalia/Apis_Quensel_1802>, <http://taxon-concept.plazi.org/id/Animalia/Bombus_Torre_1882>, <http://dx.doi.org/10.5281/zenodo.3268177>, <http://dx.doi.org/10.5281/zenodo.3268195>, <http://dx.doi.org/10.5281/zenodo.3268213>, <http://dx.doi.org/10.5281/zenodo.3268187>, <http://dx.doi.org/10.5281/zenodo.3268193> ;
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dc:creator "Williams, Paul H.; Berezin, Mikhail V.; Cannings, Sydney G.; Cederberg, Björn; Ødegaard, Frode; Rasmussen, Claus; Richardson, Leif L.; Rykken, Jessica; Sheffield, Cory S.; Thanoosing, Chawatat; Byvaltsev, Alexandr M." ;
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dc:title "Bombus alpinus " ;
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trt:augmentsTaxonConcept <http://taxon-concept.plazi.org/id/Animalia/Bombus_alpinus_Linnaeus_1758> ;
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trt:deprecates <http://taxon-concept.plazi.org/id/Animalia/Apis_alpina_Linnaeus_1758>, <http://taxon-concept.plazi.org/id/Animalia/Bombus_rufescens_%5B_1835>, <http://taxon-concept.plazi.org/id/Animalia/Bombus_helleri_Torre_1882>, <http://taxon-concept.plazi.org/id/Animalia/Bombus_pratorum_Linnaeus_1761> ;
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trt:publishedIn <http://dx.doi.org/10.11646/zootaxa.4625.1.1> ;
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a trt:Treatment .
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<http://dx.doi.org/10.11646/zootaxa.4625.1.1>
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bibo:endPage "68" ;
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bibo:issue "1" ;
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bibo:journal "Zootaxa" ;
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bibo:pubDate "2019-07-03" ;
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bibo:startPage "1" ;
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bibo:volume "4625" ;
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dc:creator "Williams, Paul H.; Berezin, Mikhail V.; Cannings, Sydney G.; Cederberg, Björn; Ødegaard, Frode; Rasmussen, Claus; Richardson, Leif L.; Rykken, Jessica; Sheffield, Cory S.; Thanoosing, Chawatat; Byvaltsev, Alexandr M." ;
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dc:date "2019" ;
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dc:title "The arctic and alpine bumblebees of the subgenus Alpinobombus revised from integrative assessment of species’ gene coalescents and morphology (Hymenoptera, Apidae, Bombus)" ;
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fabio:hasPart <http://dx.doi.org/10.5281/zenodo.3268177>, <http://dx.doi.org/10.5281/zenodo.3268195>, <http://dx.doi.org/10.5281/zenodo.3268213>, <http://dx.doi.org/10.5281/zenodo.3268187>, <http://dx.doi.org/10.5281/zenodo.3268193> ;
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a fabio:JournalArticle .
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<http://taxon-concept.plazi.org/id/Animalia/Bombus_alpinus_Linnaeus_1758>
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dwc:authority "(Linnaeus)" ;
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dwc:authorityName "" ;
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dwc:baseAuthorityName "Linnaeus" ;
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dwc:baseAuthorityYear "1758" ;
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dwc:class "Insecta" ;
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dwc:family "Apidae" ;
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dwc:genus "Bombus" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Hymenoptera" ;
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dwc:phylum "Arthropoda" ;
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dwc:rank "species" ;
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dwc:scientificNameAuthorship "(Linnaeus, 1758)" ;
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dwc:species "alpinus" ;
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rdfs:seeAlso <https://www.catalogueoflife.org/data/taxon/MFDH> ;
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trt:hasTaxonName <http://taxon-name.plazi.org/id/Animalia/Bombus_alpinus> ;
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a dwcFP:TaxonConcept .
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<http://taxon-concept.plazi.org/id/Animalia/Apis_Quensel_1802>
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dwc:authorityName "Arctica Quensel in Acerbi" ;
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dwc:authorityYear "1802" ;
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dwc:class "Insecta" ;
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dwc:family "Apidae" ;
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dwc:genus "Apis" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Hymenoptera" ;
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dwc:phylum "Arthropoda" ;
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dwc:rank "genus" ;
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dwc:scientificNameAuthorship "Arctica Quensel, 1802" ;
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rdfs:seeAlso <https://www.catalogueoflife.org/data/taxon/MFDH> ;
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trt:hasTaxonName <http://taxon-name.plazi.org/id/Animalia/Apis> ;
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a dwcFP:TaxonConcept .
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<http://taxon-concept.plazi.org/id/Animalia/Apis_alpina_Linnaeus_1758>
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dwc:authority "Linnaeus 1758: 579" ;
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dwc:authorityName "Linnaeus" ;
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dwc:authorityPageNumber "579" ;
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dwc:authorityYear "1758" ;
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dwc:class "Insecta" ;
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dwc:family "Apidae" ;
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dwc:genus "Apis" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Hymenoptera" ;
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dwc:phylum "Arthropoda" ;
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dwc:rank "species" ;
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dwc:scientificNameAuthorship "Linnaeus, 1758" ;
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dwc:species "alpina" ;
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rdfs:seeAlso <https://www.catalogueoflife.org/data/taxon/MFDH> ;
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trt:hasTaxonName <http://taxon-name.plazi.org/id/Animalia/Apis_alpina> ;
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a dwcFP:TaxonConcept .
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<http://taxon-concept.plazi.org/id/Animalia/Bombus_rufescens_%5B_1835>
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dwc:authority "Lepeletier de Saint-Fargeau [1835]" ;
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dwc:authorityName "Lepeletier de Saint-Fargeau [" ;
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dwc:authorityYear "1835" ;
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dwc:class "Insecta" ;
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dwc:family "Apidae" ;
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dwc:genus "Bombus" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Hymenoptera" ;
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dwc:phylum "Arthropoda" ;
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dwc:rank "species" ;
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dwc:scientificNameAuthorship "Lepeletier de Saint-Fargeau [, 1835" ;
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dwc:species "rufescens" ;
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rdfs:seeAlso <https://www.catalogueoflife.org/data/taxon/MFDH> ;
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trt:hasTaxonName <http://taxon-name.plazi.org/id/Animalia/Bombus_rufescens> ;
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a dwcFP:TaxonConcept .
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<http://taxon-concept.plazi.org/id/Animalia/Bombus_Torre_1882>
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dwc:authority "Helleri von Dalla Torre 1882: 16" ;
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dwc:authorityName "Helleri von Dalla Torre" ;
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dwc:authorityPageNumber "16" ;
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dwc:authorityYear "1882" ;
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dwc:class "Insecta" ;
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dwc:family "Apidae" ;
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dwc:genus "Bombus" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Hymenoptera" ;
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dwc:phylum "Arthropoda" ;
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dwc:rank "genus" ;
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dwc:scientificNameAuthorship "Helleri von Dalla Torre, 1882" ;
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rdfs:seeAlso <https://www.catalogueoflife.org/data/taxon/MFDH> ;
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trt:hasTaxonName <http://taxon-name.plazi.org/id/Animalia/Bombus> ;
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a dwcFP:TaxonConcept .
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<http://taxon-concept.plazi.org/id/Animalia/Bombus_helleri_Torre_1882>
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dwc:authority "von Dalla Torre 1882: 16" ;
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dwc:authorityName "von Dalla Torre" ;
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dwc:authorityPageNumber "16" ;
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dwc:authorityYear "1882" ;
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dwc:class "Insecta" ;
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dwc:family "Apidae" ;
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dwc:genus "Bombus" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Hymenoptera" ;
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dwc:phylum "Arthropoda" ;
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dwc:rank "species" ;
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dwc:scientificNameAuthorship "von Dalla Torre, 1882" ;
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dwc:species "helleri" ;
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rdfs:seeAlso <https://www.catalogueoflife.org/data/taxon/MFDH> ;
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trt:hasTaxonName <http://taxon-name.plazi.org/id/Animalia/Bombus_helleri> ;
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a dwcFP:TaxonConcept .
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<http://taxon-concept.plazi.org/id/Animalia/Bombus_pratorum_Linnaeus_1761>
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dwc:authority "(Linnaeus))" ;
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dwc:authorityName "" ;
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dwc:baseAuthorityName "Linnaeus" ;
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dwc:baseAuthorityYear "1761" ;
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dwc:class "Insecta" ;
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dwc:family "Apidae" ;
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dwc:genus "Bombus" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Hymenoptera" ;
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dwc:phylum "Arthropoda" ;
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dwc:rank "species" ;
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dwc:scientificNameAuthorship "(Linnaeus, 1761)" ;
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dwc:species "pratorum" ;
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rdfs:seeAlso <https://www.catalogueoflife.org/data/taxon/MFDH> ;
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trt:hasTaxonName <http://taxon-name.plazi.org/id/Animalia/Bombus_pratorum> ;
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a dwcFP:TaxonConcept .
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<http://taxon-name.plazi.org/id/Animalia/Bombus_alpinus>
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dwc:class "Insecta" ;
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dwc:family "Apidae" ;
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dwc:genus "Bombus" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Hymenoptera" ;
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dwc:phylum "Arthropoda" ;
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dwc:rank "species" ;
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dwc:species "alpinus" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Animalia/Bombus> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Animalia/Bombus>
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dwc:class "Insecta" ;
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dwc:family "Apidae" ;
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dwc:genus "Bombus" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Hymenoptera" ;
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dwc:phylum "Arthropoda" ;
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dwc:rank "genus" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Animalia/Apidae> ;
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a dwcFP:TaxonName .
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||
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<http://taxon-name.plazi.org/id/Animalia/Apidae>
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dwc:class "Insecta" ;
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||
dwc:family "Apidae" ;
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||
dwc:kingdom "Animalia" ;
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dwc:order "Hymenoptera" ;
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||
dwc:phylum "Arthropoda" ;
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dwc:rank "family" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Animalia/Hymenoptera> ;
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a dwcFP:TaxonName .
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||
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||
<http://taxon-name.plazi.org/id/Animalia/Hymenoptera>
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dwc:class "Insecta" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Hymenoptera" ;
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dwc:phylum "Arthropoda" ;
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dwc:rank "order" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Animalia/Insecta> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Animalia/Insecta>
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dwc:class "Insecta" ;
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dwc:kingdom "Animalia" ;
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||
dwc:phylum "Arthropoda" ;
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||
dwc:rank "class" ;
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||
trt:hasParentName <http://taxon-name.plazi.org/id/Animalia/Arthropoda> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Animalia/Arthropoda>
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dwc:kingdom "Animalia" ;
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||
dwc:phylum "Arthropoda" ;
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||
dwc:rank "phylum" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Animalia> ;
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a dwcFP:TaxonName .
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||
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<http://taxon-name.plazi.org/id/Animalia>
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dwc:kingdom "Animalia" ;
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dwc:rank "kingdom" ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Animalia/Apis>
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dwc:class "Insecta" ;
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dwc:family "Apidae" ;
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dwc:genus "Apis" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Hymenoptera" ;
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dwc:phylum "Arthropoda" ;
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dwc:rank "genus" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Animalia/Apidae> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Animalia/Apis_alpina>
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dwc:class "Insecta" ;
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dwc:family "Apidae" ;
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dwc:genus "Apis" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Hymenoptera" ;
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dwc:phylum "Arthropoda" ;
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dwc:rank "species" ;
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dwc:species "alpina" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Animalia/Apis> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Animalia/Bombus_rufescens>
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dwc:class "Insecta" ;
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dwc:family "Apidae" ;
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dwc:genus "Bombus" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Hymenoptera" ;
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dwc:phylum "Arthropoda" ;
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dwc:rank "species" ;
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dwc:species "rufescens" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Animalia/Bombus> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Animalia/Bombus_helleri>
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dwc:class "Insecta" ;
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dwc:family "Apidae" ;
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dwc:genus "Bombus" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Hymenoptera" ;
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dwc:phylum "Arthropoda" ;
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dwc:rank "species" ;
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dwc:species "helleri" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Animalia/Bombus> ;
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a dwcFP:TaxonName .
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||
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<http://taxon-name.plazi.org/id/Animalia/Bombus_pratorum>
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dwc:class "Insecta" ;
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dwc:family "Apidae" ;
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dwc:genus "Bombus" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Hymenoptera" ;
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dwc:phylum "Arthropoda" ;
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dwc:rank "species" ;
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dwc:species "pratorum" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Animalia/Bombus> ;
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a dwcFP:TaxonName .
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||
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<http://dx.doi.org/10.5281/zenodo.3268177>
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dc:description "FIGURES 1‒6. Lateral views of foraging females (queens) of species of the subgenus Alpinobombus (with photo credits): 1, B. alpinus, Norway (A. Staverløkk); 2, B. pyrrhopygus, Sweden (G. Holmström); 3, B. polaris, Canada (B. Heinrich); 4, B. balteatus, Sweden (G. Holmström); 5, B. kirbiellus, USA (D. Wilson); 6, B. hyperboreus, Sweden (L.-I. Larsson). Some images reversed." ;
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fabio:hasRepresentation <https://zenodo.org/record/3268177/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.3268195>
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dc:description "FIGURES 15‒21. 15: Bombus alpinus global distribution shown with: grey spots for specimens examined; black spots for samples with COI barcodes; question marks for uncertain records at low elevation and low latitude; and grey crosses for records of all species of Alpinobombus combined (Alpinobombus species are unknown from the southern hemisphere). Relief map with hill shading, Polar projection, the international boundaries and the Arctic Circle are shown as narrow grey lines, and the northern tree line shown as a broad grey line. Image created in ArcGIS using World_Shaded_Relief basemap which is Copyright: © 2014 Esri. 16‒21: simplified colour-pattern diagrams for the dorsal hair, with olive indicating a mixture of black and yellow. Figure (AL#n) country: 16 (#14) Sweden; 17 (#113) Sweden; 18 (#3785) Austria; 19 (#3787) Austria; 20 (#3788) Austria; 21 (#141) Norway." ;
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fabio:hasRepresentation <https://zenodo.org/record/3268195/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.3268213>
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dc:description "FIGURES 129‒137. Morphology of the male genitalia for species of the subgenus Alpinobombus from the dorsal aspect, anterior to the left of the image, posterior to the right: 129 B. alpinus (#3824); 130 B pyrrhopygus (#3833); 131 B. polaris (#73); 132 B. balteatus (#3843); 133 B. kirbiellus (#3768); 134 B. neoboreus (#4387); 135 B. kluanensis (#4876); 136 B. natvigi (#81); 137 B. hyperboreus (#3821)." ;
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fabio:hasRepresentation <https://zenodo.org/record/3268213/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.3268187>
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dc:description "FIGURE 9. Estimate of the metric gene tree for the 54 longest unique COI-barcode alleles of the subgenus Alpinobombus from MrBayes combined with the Bayesian Poisson-tree-process (PTP) solution with the highest support with spots showing the nodes with the strongest support as coalescents for candidate species (outgroup B. ignitus not shown). Values above the nodes are Bayesian posterior probabilities showing branch support for groups; values below the nodes are PTP Bayesian support values that all daughter alleles are parts of a single species (probabilities within candidate species are all ≤ 0.44). The scale bar is calibrated in substitutions per nucleotide site. Each unique allele is represented by one of the longest available sample sequences, labelled with: the sequence length in number of nucleotides, a taxon name or name describing an unpublished colour pattern, and then a code that consists of a specimen identifier (AL#n) from the project database and (after the hyphen) a sample identifier from BOLD or GenBank, followed with its geographic origin (for simplicity Greenland is included without Denmark)." ;
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fabio:hasRepresentation <https://zenodo.org/record/3268187/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.3268193>
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dc:description "FIGURE 14. Assigning names to candidate species in a COI gene tree for the 235 specimens of the subgenus Alpinobombus with sequences. Based on the MrBayes analysis of all of the 54 longest unique alleles in Fig. 9, with the remaining sequences interpolated back into the tree with 0 branch lengths from their matching samples (where a sequence matches more than one longer sequence within a species in the Collapse results, it is arbitrarily added after the first matching sequence). The sequence labels follow the format used in Fig. 9. Lineages with high probabilities of representing candidate species in the Poisson-tree-process (PTP) results (Fig. 9) are shown as thick branches with the most recent common ancestors (coalescents) of each candidate species shown with a black spot, the branches within candidate species shown as thin branches. Asterisks mark samples used as informal proxies for the type specimens of each of the taxon names in Table 2. The proxy sample for the type specimen for the oldest available name (the valid name) for each candidate species (from Fig. 9) is marked in bold." ;
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fabio:hasRepresentation <https://zenodo.org/record/3268193/files/figure.png> ;
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a fabio:Figure .
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