129 lines
7 KiB
Turtle
129 lines
7 KiB
Turtle
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
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@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
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@prefix bibo: <http://purl.org/ontology/bibo/> .
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@prefix cito: <http://purl.org/spar/cito/> .
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@prefix dc: <http://purl.org/dc/elements/1.1/> .
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@prefix dwc: <http://rs.tdwg.org/dwc/terms/> .
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@prefix dwcFP: <http://filteredpush.org/ontologies/oa/dwcFP#> .
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@prefix fabio: <http://purl.org/spar/fabio/> .
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@prefix trt: <http://plazi.org/vocab/treatment#> .
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@prefix xlink: <http://www.w3.org/1999/xlink/> .
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<http://treatment.plazi.org/id/03F38785FF89811EFF8CB3FFFDBB9676>
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cito:cites <http://dx.doi.org/10.5281/zenodo.8235681>, <http://dx.doi.org/10.5281/zenodo.8235683>, <http://dx.doi.org/10.5281/zenodo.8235675>, <http://dx.doi.org/10.5281/zenodo.8235677>, <http://dx.doi.org/10.5281/zenodo.8235685>, <http://dx.doi.org/10.5281/zenodo.8235679>, <http://dx.doi.org/10.5281/zenodo.8235687> ;
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dc:creator "Xie, Yongfeng; Ding, Meiling; Yin, Xuecui; Wang, Guanfeng; Zhang, Bin; Chen, Lingxiang; Ma, Pengda; Dong, Juane" ;
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dc:title "Salvia miltiorrhiza Bunge" ;
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trt:publishedIn <http://dx.doi.org/10.1016/j.phytochem.2022.113177> ;
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trt:treatsTaxonName <http://taxon-name.plazi.org/id/Plantae/Salvia_miltiorrhiza> ;
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a trt:Treatment .
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<http://dx.doi.org/10.1016/j.phytochem.2022.113177>
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bibo:endPage "10" ;
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bibo:journal "Phytochemistry" ;
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bibo:pubDate "2022-07-31" ;
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bibo:series "113177" ;
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bibo:startPage "1" ;
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bibo:volume "199" ;
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dc:creator "Xie, Yongfeng; Ding, Meiling; Yin, Xuecui; Wang, Guanfeng; Zhang, Bin; Chen, Lingxiang; Ma, Pengda; Dong, Juane" ;
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dc:date "2022" ;
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dc:title "MAPKK 2 / 4 / 5 / 7 - MAPK 3 - JAZs modulate phenolic acid biosynthesis in Salvia miltiorrhiza" ;
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fabio:hasPart <http://dx.doi.org/10.5281/zenodo.8235681>, <http://dx.doi.org/10.5281/zenodo.8235683>, <http://dx.doi.org/10.5281/zenodo.8235675>, <http://dx.doi.org/10.5281/zenodo.8235677>, <http://dx.doi.org/10.5281/zenodo.8235685>, <http://dx.doi.org/10.5281/zenodo.8235679>, <http://dx.doi.org/10.5281/zenodo.8235687> ;
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a fabio:JournalArticle .
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<http://taxon-name.plazi.org/id/Plantae/Salvia_miltiorrhiza>
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dwc:class "Magnoliopsida" ;
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dwc:family "Lamiaceae" ;
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dwc:genus "Salvia" ;
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dwc:kingdom "Plantae" ;
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dwc:order "Lamiales" ;
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dwc:phylum "Tracheophyta" ;
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dwc:rank "species" ;
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dwc:species "miltiorrhiza" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Plantae/Salvia> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Plantae/Salvia>
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dwc:class "Magnoliopsida" ;
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dwc:family "Lamiaceae" ;
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dwc:genus "Salvia" ;
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dwc:kingdom "Plantae" ;
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dwc:order "Lamiales" ;
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dwc:phylum "Tracheophyta" ;
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dwc:rank "genus" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Plantae/Lamiaceae> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Plantae/Lamiaceae>
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dwc:class "Magnoliopsida" ;
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dwc:family "Lamiaceae" ;
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dwc:kingdom "Plantae" ;
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dwc:order "Lamiales" ;
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dwc:phylum "Tracheophyta" ;
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dwc:rank "family" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Plantae/Lamiales> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Plantae/Lamiales>
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dwc:class "Magnoliopsida" ;
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dwc:kingdom "Plantae" ;
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dwc:order "Lamiales" ;
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dwc:phylum "Tracheophyta" ;
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dwc:rank "order" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Plantae/Magnoliopsida> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Plantae/Magnoliopsida>
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dwc:class "Magnoliopsida" ;
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dwc:kingdom "Plantae" ;
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dwc:phylum "Tracheophyta" ;
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dwc:rank "class" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Plantae/Tracheophyta> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Plantae/Tracheophyta>
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dwc:kingdom "Plantae" ;
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dwc:phylum "Tracheophyta" ;
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dwc:rank "phylum" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Plantae> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Plantae>
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dwc:kingdom "Plantae" ;
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dwc:rank "kingdom" ;
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a dwcFP:TaxonName .
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<http://dx.doi.org/10.5281/zenodo.8235681>
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dc:description "Fig. 4. Overexpression of SmMAPK3 affects phenolic acid biosynthesis and the expression of biosynthetic genes in S. miltiorrhiza. (A) Relative quantitative analysis of SmMAPK3 expression in the transgenic lines and controls. *** indicates significant differences between OM and the control (P <0.001, Student’s t-test). (B) Analysis of phenolic acid production from OE. (C–J) Relative expression levels of genes involved in phenolic acid biosynthesis in the OE lines." ;
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fabio:hasRepresentation <https://zenodo.org/record/8235681/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.8235683>
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dc:description "Fig. 5. Protein–protein interaction between SmMAPKKs and SmMAPK3. Y2H (A) and LCI (B–D) assays to detect upstream proteins of SmMAPK3." ;
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fabio:hasRepresentation <https://zenodo.org/record/8235683/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.8235675>
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dc:description "Fig. 1. Identification and autophosphorylation of SmMAPK3 in S. miltiorrhiza. (A) Amplication of SmMAPK3 from S. miltiorrhiza. (B) Phylogenic tree analysis of SmMAPK3 with AtMAPKs. (C) The conserved domains of SmMAPK3. (D) Immunoblotting analysis of SmMAPK3 autophosphorylation in vitro with Phos-tag™ SDS–PAGE. Phosphorylated SmMAPK3 (pSmMAPK3) migrates more slowly in the gel." ;
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fabio:hasRepresentation <https://zenodo.org/record/8235675/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.8235677>
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dc:description "Fig. 2. SmMAPK3 is associated with the biosynthesis of phenolic acids. (A) Expression patterns of phenolic acid biosynthetic genes in 18 samples. (B) Network built on correlations among kinases, structural genes and TFs. Pearson correlation coefficient (PCC) values were calculated for each pair of genes." ;
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fabio:hasRepresentation <https://zenodo.org/record/8235677/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.8235685>
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dc:description "Fig. 6. Protein–protein interaction of SmMAPK3 with JA signaling members. Y2H (A) and LCI (B–C) assays to detect the interactions of SmMAPK3 with JAZs." ;
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fabio:hasRepresentation <https://zenodo.org/record/8235685/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.8235679>
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dc:description "Fig. 3. Tissue-specific expression analysis and elicitors-induced analysis of SmMAPK3 in S. miltiorrhiza. (A) Tissue-specific expression of SmMAPK3; the expression levels were normalized to values from roots. (B) SA-induced analysis of SmMAPK3. (C) MeJA-induced analysis of SmMAPK3." ;
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fabio:hasRepresentation <https://zenodo.org/record/8235679/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.8235687>
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dc:description "Fig. 7. A proposed model for the roles of SmMAPK3 in S. miltiorrhiza phenolic acid biosynthesis. Model illustrating the roles of SmMAPK3 in S. miltiorrhiza phenolic acid biosynthesis." ;
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fabio:hasRepresentation <https://zenodo.org/record/8235687/files/figure.png> ;
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a fabio:Figure .
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