128 lines
6 KiB
Turtle
128 lines
6 KiB
Turtle
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
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@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
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@prefix bibo: <http://purl.org/ontology/bibo/> .
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@prefix cito: <http://purl.org/spar/cito/> .
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@prefix dc: <http://purl.org/dc/elements/1.1/> .
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@prefix dwc: <http://rs.tdwg.org/dwc/terms/> .
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@prefix dwcFP: <http://filteredpush.org/ontologies/oa/dwcFP#> .
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@prefix fabio: <http://purl.org/spar/fabio/> .
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@prefix trt: <http://plazi.org/vocab/treatment#> .
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@prefix xlink: <http://www.w3.org/1999/xlink/> .
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<http://treatment.plazi.org/id/442187AFFFCCFFD22869F8D5FA520388>
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cito:cites <http://dx.doi.org/10.5281/zenodo.8293260> ;
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dc:creator "Costa, Laura S. M.; Allan; Pires, S.; Damaceno, Neila B.; Rigueiras, Pietra O.; Maximiano, Mariana R.; Franco, Octavio L.; Porto, William F." ;
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dc:title "Arabidopsis thaliana subsp. defensins" ;
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dwc:basisOfRecord <http://tb.plazi.org/GgServer/dwcaRecords/442187AFFFCCFFD22869F8D5FA520388.mc.7CE03CE4FFCCFFD22889F8EDFB9B0347>, <http://tb.plazi.org/GgServer/dwcaRecords/442187AFFFCCFFD22869F8D5FA520388.mc.7CE03CE4FFCCFFD22C04FC25FA5E0388> ;
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trt:augmentsTaxonConcept <http://taxon-concept.plazi.org/id/Plantae/Arabidopsis_thaliana_L_> ;
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trt:publishedIn <http://dx.doi.org/10.1016/j.phytochem.2020.112511> ;
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a trt:Treatment .
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<http://dx.doi.org/10.1016/j.phytochem.2020.112511>
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bibo:endPage "8" ;
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bibo:journal "Phytochemistry" ;
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bibo:pubDate "2020-11-30" ;
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bibo:series "112511" ;
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bibo:startPage "1" ;
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bibo:volume "179" ;
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dc:creator "Costa, Laura S. M.; Allan; Pires, S.; Damaceno, Neila B.; Rigueiras, Pietra O.; Maximiano, Mariana R.; Franco, Octavio L.; Porto, William F." ;
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dc:date "2020" ;
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dc:title "In silico characterization of class II plant defensins from Arabidopsis thaliana" ;
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fabio:hasPart <http://dx.doi.org/10.5281/zenodo.8293260> ;
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a fabio:JournalArticle .
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<http://taxon-concept.plazi.org/id/Plantae/Arabidopsis_thaliana_L_>
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dwc:ID-ENA "3702" ;
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dwc:authority "L." ;
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dwc:class "Magnoliopsida" ;
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dwc:family "Brassicaceae" ;
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dwc:genus "Arabidopsis" ;
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dwc:kingdom "Plantae" ;
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dwc:order "Brassicales" ;
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dwc:phylum "Tracheophyta" ;
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dwc:rank "species" ;
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dwc:scientificNameAuthorship "L." ;
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dwc:species "thaliana" ;
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rdfs:seeAlso <https://www.catalogueoflife.org/data/taxon/G26R> ;
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trt:hasTaxonName <http://taxon-name.plazi.org/id/Plantae/Arabidopsis_thaliana> ;
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a dwcFP:TaxonConcept .
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<http://taxon-name.plazi.org/id/Plantae/Arabidopsis_thaliana>
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dwc:class "Magnoliopsida" ;
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dwc:family "Brassicaceae" ;
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dwc:genus "Arabidopsis" ;
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dwc:kingdom "Plantae" ;
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dwc:order "Brassicales" ;
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dwc:phylum "Tracheophyta" ;
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dwc:rank "species" ;
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dwc:species "thaliana" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Plantae/Arabidopsis> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Plantae/Arabidopsis>
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dwc:class "Magnoliopsida" ;
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dwc:family "Brassicaceae" ;
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dwc:genus "Arabidopsis" ;
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dwc:kingdom "Plantae" ;
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dwc:order "Brassicales" ;
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dwc:phylum "Tracheophyta" ;
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dwc:rank "genus" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Plantae/Brassicaceae> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Plantae/Brassicaceae>
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dwc:class "Magnoliopsida" ;
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dwc:family "Brassicaceae" ;
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dwc:kingdom "Plantae" ;
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dwc:order "Brassicales" ;
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dwc:phylum "Tracheophyta" ;
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dwc:rank "family" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Plantae/Brassicales> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Plantae/Brassicales>
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dwc:class "Magnoliopsida" ;
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dwc:kingdom "Plantae" ;
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dwc:order "Brassicales" ;
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dwc:phylum "Tracheophyta" ;
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dwc:rank "order" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Plantae/Magnoliopsida> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Plantae/Magnoliopsida>
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dwc:class "Magnoliopsida" ;
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dwc:kingdom "Plantae" ;
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dwc:phylum "Tracheophyta" ;
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dwc:rank "class" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Plantae/Tracheophyta> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Plantae/Tracheophyta>
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dwc:kingdom "Plantae" ;
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dwc:phylum "Tracheophyta" ;
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dwc:rank "phylum" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Plantae> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Plantae>
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dwc:kingdom "Plantae" ;
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dwc:rank "kingdom" ;
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a dwcFP:TaxonName .
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<http://dx.doi.org/10.5281/zenodo.8293260>
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dc:description "Fig. 1. Flowchart of identification of class II defensins. The indigo boxes indicated steps performed by Perl scripts and the red boxes, steps curated by hand. The white boxes indicated the number of sequences for each respective step. The sequences from A. thaliana were retrieved from UniProt database; the defensin RegEx “CX2-18CX3CX2-10[GAPSIDERYW]XCX4-17CXC” was determined by Zhu (Zhu, 2008). The complete sequences were retrieved according the UniProt annotations; and the sequences predicted to be secreted were selected according to the Phobius prediction, presenting signal peptide and no transmembrane domains. The selected sequences at the end of the process represented less than 1% of all defensin sequences from A. thaliana. (For interpretation of the references to colour in this figure legend, the reader is referred to the Web version of this article.)" ;
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fabio:hasRepresentation <https://zenodo.org/record/8293260/files/figure.png> ;
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a fabio:Figure .
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<http://tb.plazi.org/GgServer/dwcaRecords/442187AFFFCCFFD22869F8D5FA520388.mc.7CE03CE4FFCCFFD22889F8EDFB9B0347>
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dwc:collectionCode "PERL" ;
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dwc:eventDate "2017-03" ;
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trt:httpUri <https://treatment.plazi.org/id/442187AFFFCCFFD22869F8D5FA520388#7CE03CE4FFCCFFD22889F8EDFB9B0347> ;
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a dwc:MaterialCitation .
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<http://tb.plazi.org/GgServer/dwcaRecords/442187AFFFCCFFD22869F8D5FA520388.mc.7CE03CE4FFCCFFD22C04FC25FA5E0388>
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dwc:catalogNumber "A7, REG2, REG4" ;
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dwc:collectionCode "A, REG" ;
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trt:httpUri <https://treatment.plazi.org/id/442187AFFFCCFFD22869F8D5FA520388#7CE03CE4FFCCFFD22C04FC25FA5E0388> ;
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a dwc:MaterialCitation .
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