247 lines
11 KiB
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247 lines
11 KiB
Turtle
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
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@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
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@prefix bibo: <http://purl.org/ontology/bibo/> .
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@prefix cito: <http://purl.org/spar/cito/> .
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@prefix dc: <http://purl.org/dc/elements/1.1/> .
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@prefix dwc: <http://rs.tdwg.org/dwc/terms/> .
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@prefix dwcFP: <http://filteredpush.org/ontologies/oa/dwcFP#> .
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@prefix fabio: <http://purl.org/spar/fabio/> .
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@prefix trt: <http://plazi.org/vocab/treatment#> .
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@prefix xlink: <http://www.w3.org/1999/xlink/> .
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<http://treatment.plazi.org/id/853D1219FFFCFFADEBD7EA1FB75EF80E>
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cito:cites <http://taxon-concept.plazi.org/id/Animalia/Otomys_Cuvier_1824>, <http://dx.doi.org/10.5281/zenodo.10470264>, <http://dx.doi.org/10.5281/zenodo.10470262> ;
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dc:creator "Mizerovská, Daniela; Martynov, Aleksey A.; Mikula, Ondřej; Bryjová, Anna; Meheretu, Yonas; Lavrenchenko, Leonid A.; Bryja, Josef" ;
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dc:title "Otomys typus Heuglin 1877" ;
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dwc:basisOfRecord <http://tb.plazi.org/GgServer/dwcaRecords/853D1219FFFCFFADEBD7EA1FB75EF80E.mc.BDFCA952FFFCFFADEB00EC47B07EFB99> ;
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trt:augmentsTaxonConcept <http://taxon-concept.plazi.org/id/Animalia/Otomys_typus_Heuglin_1877> ;
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trt:deprecates <http://taxon-concept.plazi.org/id/Animalia/Oreomys_typus_Heuglin_1877>, <http://taxon-concept.plazi.org/id/Animalia/Otomys_typus_Thomas_1906>, <http://taxon-concept.plazi.org/id/Animalia/Otomys_typus_Allen_1939>, <http://taxon-concept.plazi.org/id/Animalia/Otomys_irroratus_Brants_1827> ;
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trt:publishedIn <http://dx.doi.org/10.1093/zoolinnean/zlad063> ;
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a trt:Treatment .
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<http://dx.doi.org/10.1093/zoolinnean/zlad063>
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bibo:endPage "1077" ;
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bibo:issue "4" ;
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bibo:journal "Zoological Journal of the Linnean Society" ;
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bibo:pubDate "2023-08-25" ;
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bibo:startPage "1059" ;
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bibo:volume "199" ;
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dc:creator "Mizerovská, Daniela; Martynov, Aleksey A.; Mikula, Ondřej; Bryjová, Anna; Meheretu, Yonas; Lavrenchenko, Leonid A.; Bryja, Josef" ;
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dc:date "2023" ;
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dc:title "Genomic diversity, evolutionary history, and species limits of the endemic Ethiopian laminate-toothed rats (genus Otomys, Rodentia: Muridae)" ;
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fabio:hasPart <http://dx.doi.org/10.5281/zenodo.10470264>, <http://dx.doi.org/10.5281/zenodo.10470262> ;
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a fabio:JournalArticle .
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<http://taxon-concept.plazi.org/id/Animalia/Otomys_typus_Heuglin_1877>
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dwc:authority "Heuglin 1877" ;
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dwc:authorityName "Heuglin" ;
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dwc:authorityYear "1877" ;
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dwc:class "Mammalia" ;
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dwc:family "Muridae" ;
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dwc:genus "Otomys" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Rodentia" ;
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dwc:phylum "Chordata" ;
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dwc:rank "species" ;
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dwc:scientificNameAuthorship "Heuglin, 1877" ;
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dwc:species "typus" ;
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rdfs:seeAlso <https://www.catalogueoflife.org/data/taxon/4B7L9> ;
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trt:hasTaxonName <http://taxon-name.plazi.org/id/Animalia/Otomys_typus> ;
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a dwcFP:TaxonConcept .
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<http://taxon-concept.plazi.org/id/Animalia/Oreomys_typus_Heuglin_1877>
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dwc:authority "Heuglin 1877: 76" ;
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dwc:authorityName "Heuglin" ;
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dwc:authorityPageNumber "76" ;
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dwc:authorityYear "1877" ;
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dwc:class "Mammalia" ;
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dwc:family "Muridae" ;
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dwc:genus "Oreomys" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Rodentia" ;
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dwc:phylum "Chordata" ;
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dwc:rank "species" ;
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dwc:scientificNameAuthorship "Heuglin, 1877" ;
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dwc:species "typus" ;
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trt:hasTaxonName <http://taxon-name.plazi.org/id/Animalia/Oreomys_typus> ;
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a dwcFP:TaxonConcept .
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<http://taxon-concept.plazi.org/id/Animalia/Otomys_Cuvier_1824>
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dwc:authorityName "F. Cuvier" ;
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dwc:authorityYear "1824" ;
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dwc:class "Mammalia" ;
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dwc:family "Muridae" ;
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dwc:genus "Otomys" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Rodentia" ;
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dwc:phylum "Chordata" ;
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dwc:rank "genus" ;
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dwc:scientificNameAuthorship "Cuvier, 1824" ;
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rdfs:seeAlso <https://www.catalogueoflife.org/data/taxon/4B7L9> ;
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trt:hasTaxonName <http://taxon-name.plazi.org/id/Animalia/Otomys> ;
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a dwcFP:TaxonConcept .
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<http://taxon-concept.plazi.org/id/Animalia/Otomys_typus_Thomas_1906>
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dwc:authority "Thomas 1906" ;
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dwc:authorityName "Thomas" ;
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dwc:authorityYear "1906" ;
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dwc:class "Mammalia" ;
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dwc:family "Muridae" ;
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dwc:genus "Otomys" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Rodentia" ;
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dwc:phylum "Chordata" ;
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dwc:rank "species" ;
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dwc:scientificNameAuthorship "Thomas, 1906" ;
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dwc:species "typus" ;
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rdfs:seeAlso <https://www.catalogueoflife.org/data/taxon/4B7L9> ;
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trt:hasTaxonName <http://taxon-name.plazi.org/id/Animalia/Otomys_typus> ;
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a dwcFP:TaxonConcept .
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<http://taxon-concept.plazi.org/id/Animalia/Otomys_typus_Allen_1939>
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dwc:authority "Allen 1939" ;
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dwc:authorityName "Allen" ;
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dwc:authorityYear "1939" ;
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dwc:class "Mammalia" ;
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dwc:family "Muridae" ;
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dwc:genus "Otomys" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Rodentia" ;
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dwc:phylum "Chordata" ;
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dwc:rank "species" ;
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dwc:scientificNameAuthorship "Allen, 1939" ;
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dwc:species "typus" ;
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rdfs:seeAlso <https://www.catalogueoflife.org/data/taxon/4B7L9> ;
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trt:hasTaxonName <http://taxon-name.plazi.org/id/Animalia/Otomys_typus> ;
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a dwcFP:TaxonConcept .
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<http://taxon-concept.plazi.org/id/Animalia/Otomys_irroratus_Brants_1827>
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dwc:baseAuthorityName "Brants" ;
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dwc:baseAuthorityYear "1827" ;
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dwc:class "Mammalia" ;
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dwc:family "Muridae" ;
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dwc:genus "Otomys" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Rodentia" ;
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dwc:phylum "Chordata" ;
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dwc:rank "species" ;
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dwc:scientificNameAuthorship "(Brants, 1827)" ;
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dwc:species "irroratus" ;
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rdfs:seeAlso <https://www.catalogueoflife.org/data/taxon/4B7L9> ;
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trt:hasTaxonName <http://taxon-name.plazi.org/id/Animalia/Otomys_irroratus> ;
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a dwcFP:TaxonConcept .
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<http://taxon-name.plazi.org/id/Animalia/Otomys_typus>
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dwc:class "Mammalia" ;
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dwc:family "Muridae" ;
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dwc:genus "Otomys" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Rodentia" ;
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dwc:phylum "Chordata" ;
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dwc:rank "species" ;
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dwc:species "typus" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Animalia/Otomys> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Animalia/Otomys>
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dwc:class "Mammalia" ;
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dwc:family "Muridae" ;
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dwc:genus "Otomys" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Rodentia" ;
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dwc:phylum "Chordata" ;
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dwc:rank "genus" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Animalia/Muridae> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Animalia/Muridae>
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dwc:class "Mammalia" ;
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dwc:family "Muridae" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Rodentia" ;
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dwc:phylum "Chordata" ;
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dwc:rank "family" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Animalia/Rodentia> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Animalia/Rodentia>
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dwc:class "Mammalia" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Rodentia" ;
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dwc:phylum "Chordata" ;
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dwc:rank "order" ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Animalia/Mammalia>
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dwc:class "Mammalia" ;
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dwc:kingdom "Animalia" ;
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dwc:phylum "Chordata" ;
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dwc:rank "class" ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Animalia/Chordata>
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dwc:kingdom "Animalia" ;
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dwc:phylum "Chordata" ;
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dwc:rank "phylum" ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Animalia>
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dwc:kingdom "Animalia" ;
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dwc:rank "kingdom" ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Animalia/Oreomys_typus>
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dwc:class "Mammalia" ;
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dwc:family "Muridae" ;
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dwc:genus "Oreomys" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Rodentia" ;
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dwc:phylum "Chordata" ;
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dwc:rank "species" ;
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dwc:species "typus" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Animalia/Oreomys> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Animalia/Oreomys>
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dwc:class "Mammalia" ;
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dwc:family "Muridae" ;
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dwc:genus "Oreomys" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Rodentia" ;
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dwc:phylum "Chordata" ;
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dwc:rank "genus" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Animalia/Muridae> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Animalia/Otomys_irroratus>
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dwc:class "Mammalia" ;
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dwc:family "Muridae" ;
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dwc:genus "Otomys" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Rodentia" ;
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dwc:phylum "Chordata" ;
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dwc:rank "species" ;
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dwc:species "irroratus" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Animalia/Otomys> ;
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a dwcFP:TaxonName .
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<http://dx.doi.org/10.5281/zenodo.10470264>
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dc:description "Figure 3. ML tree of concatenated SNPs loci developed by ddÞD approach. Numbers above the branches indicate the bootstrap support; coloured bars correspond to six presumed Ethiopian species (for their distribution see Fig. 2B and C). The tree is based on the dataset of 5587 loci and 48 200 SNPs with a minimum 10% occupancy, but the trees from more filtered data had concordant topologies, only with progressively lower support of clades (not shown)." ;
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fabio:hasRepresentation <https://zenodo.org/record/10470264/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.10470262>
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dc:description "Figure 2. A, Cytb phylogeny of two groups (the TYPUS and SIMIENSIS groups) of endemic Ethiopian taxa from the O. typus complex. The numbers above the branches indicate BI posterior probability/ML bootstrap support.Maps show the distribution of the mitochondrial diversity in the Ethiopian SIMIENSIS group (B) and TYPUS group (C). Coloured circles indicate the localities with genetically characterized individuals; different colours correspond to six Ethiopian species marked by coloured bars on the right side of the phylogenetic tree.Stars of particular colours show the type localities (there are two stars for O. cheesmani; Dangila is the type locality, the paratype specimen was collected from Gojam). White dots are records of non-genotyped Otomys [based on Yalden et al. (1976, 1996) and the GBIF database; see more details in Bryja et al. (2019a)]. The shades of grey on the map indicate elevation." ;
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fabio:hasRepresentation <https://zenodo.org/record/10470262/files/figure.png> ;
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a fabio:Figure .
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<http://tb.plazi.org/GgServer/dwcaRecords/853D1219FFFCFFADEBD7EA1FB75EF80E.mc.BDFCA952FFFCFFADEB00EC47B07EFB99>
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dwc:catalogNumber "BMNH 2.9" ;
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dwc:collectionCode "BMNH" ;
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dwc:typeStatus "holotype" ;
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trt:httpUri <https://treatment.plazi.org/id/853D1219FFFCFFADEBD7EA1FB75EF80E#BDFCA952FFFCFFADEB00EC47B07EFB99> ;
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a dwc:MaterialCitation .
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