126 lines
9.1 KiB
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126 lines
9.1 KiB
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@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
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@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
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@prefix bibo: <http://purl.org/ontology/bibo/> .
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@prefix cito: <http://purl.org/spar/cito/> .
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@prefix dc: <http://purl.org/dc/elements/1.1/> .
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@prefix dwc: <http://rs.tdwg.org/dwc/terms/> .
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@prefix dwcFP: <http://filteredpush.org/ontologies/oa/dwcFP#> .
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@prefix fabio: <http://purl.org/spar/fabio/> .
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@prefix trt: <http://plazi.org/vocab/treatment#> .
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@prefix xlink: <http://www.w3.org/1999/xlink/> .
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<http://treatment.plazi.org/id/0228D806FFADFF83FC9AFD49FC4A6161>
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cito:cites <http://dx.doi.org/10.5281/zenodo.12538729>, <http://dx.doi.org/10.5281/zenodo.12538720>, <http://dx.doi.org/10.5281/zenodo.12538725>, <http://dx.doi.org/10.5281/zenodo.12538723>, <http://dx.doi.org/10.5281/zenodo.12538733>, <http://dx.doi.org/10.5281/zenodo.12538727> ;
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dc:creator "Van Wichelen, Jeroen; D’Hondt, Sofie; Claeys, Myriam; Vyverman, Wim; Berney, Cédric; Bass, David; Vanormelingen, Pieter" ;
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dc:title "Cochliopodium Van Wichelen & D’Hondt & Claeys & Vyverman & Berney & Bass & Vanormelingen 2016" ;
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trt:augmentsTaxonConcept <http://taxon-concept.plazi.org/id/Protozoa/Cochliopodium_Wichelen_2016> ;
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trt:publishedIn <http://dx.doi.org/10.4467/16890027AP.16.007.4942> ;
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a trt:Treatment .
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<http://dx.doi.org/10.4467/16890027AP.16.007.4942>
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bibo:endPage "87" ;
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bibo:issue "2" ;
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bibo:journal "Acta Protozoologica" ;
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bibo:startPage "61" ;
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bibo:volume "55" ;
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dc:creator "Van Wichelen, Jeroen; D’Hondt, Sofie; Claeys, Myriam; Vyverman, Wim; Berney, Cédric; Bass, David; Vanormelingen, Pieter" ;
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dc:date "2016" ;
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dc:title "A Hotspot of Amoebae Diversity: 8 New Naked Amoebae Associated with the Planktonic Bloom-forming Cyanobacterium Microcystis" ;
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fabio:hasPart <http://dx.doi.org/10.5281/zenodo.12538729>, <http://dx.doi.org/10.5281/zenodo.12538720>, <http://dx.doi.org/10.5281/zenodo.12538725>, <http://dx.doi.org/10.5281/zenodo.12538723>, <http://dx.doi.org/10.5281/zenodo.12538733>, <http://dx.doi.org/10.5281/zenodo.12538727> ;
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a fabio:JournalArticle .
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<http://taxon-concept.plazi.org/id/Protozoa/Cochliopodium_Wichelen_2016>
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dwc:authorityName "Van Wichelen & D’Hondt & Claeys & Vyverman & Berney & Bass & Vanormelingen" ;
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dwc:authorityYear "2016" ;
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dwc:class "Discosea" ;
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dwc:family "Cochliopodiidae" ;
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dwc:genus "Cochliopodium" ;
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dwc:kingdom "Protozoa" ;
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dwc:order "Himatismenida" ;
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dwc:phylum "Amoebozoa" ;
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dwc:rank "genus" ;
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dwc:scientificNameAuthorship "Van Wichelen, D’Hondt, Claeys, Vyverman, Berney, Bass & Vanormelingen, 2016" ;
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rdfs:seeAlso <https://www.catalogueoflife.org/data/taxon/3RPK> ;
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trt:hasTaxonName <http://taxon-name.plazi.org/id/Protozoa/Cochliopodium> ;
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a dwcFP:TaxonConcept .
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<http://taxon-name.plazi.org/id/Protozoa/Cochliopodium>
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dwc:class "Discosea" ;
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dwc:family "Cochliopodiidae" ;
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dwc:genus "Cochliopodium" ;
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dwc:kingdom "Protozoa" ;
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dwc:order "Himatismenida" ;
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dwc:phylum "Amoebozoa" ;
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dwc:rank "genus" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Protozoa/Cochliopodiidae> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Protozoa/Cochliopodiidae>
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dwc:class "Discosea" ;
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dwc:family "Cochliopodiidae" ;
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dwc:kingdom "Protozoa" ;
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dwc:order "Himatismenida" ;
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dwc:phylum "Amoebozoa" ;
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dwc:rank "family" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Protozoa/Himatismenida> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Protozoa/Himatismenida>
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dwc:class "Discosea" ;
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dwc:kingdom "Protozoa" ;
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dwc:order "Himatismenida" ;
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dwc:phylum "Amoebozoa" ;
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dwc:rank "order" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Protozoa/Discosea> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Protozoa/Discosea>
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dwc:class "Discosea" ;
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dwc:kingdom "Protozoa" ;
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dwc:phylum "Amoebozoa" ;
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dwc:rank "class" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Protozoa/Amoebozoa> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Protozoa/Amoebozoa>
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dwc:kingdom "Protozoa" ;
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dwc:phylum "Amoebozoa" ;
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dwc:rank "phylum" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Protozoa> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Protozoa>
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dwc:kingdom "Protozoa" ;
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dwc:rank "kingdom" ;
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a dwcFP:TaxonName .
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<http://dx.doi.org/10.5281/zenodo.12538729>
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dc:description "Fig. 7. A – 18S rDNA maximum likelihood phylogeny of Cochliopodium, including the Microcystis-associated strain (in bold). ML bootstrap values respectively posterior probabilities are shown at the nodes. GenBank accession numbers are given together with the species names. B – LM pictures of locomotive amoebae clearly showing the surrounding hyaline sheet (black arrows) punctuated with microscales (best visible in 8), a few small subpseudopodia (black arrowheads) and trailing adhesive uroidal filaments (white arrows) (1–5), a tropho- zoite during and just after grazing on Microcystis cells showing a prominent fringe of folded hyaloplasm (white arrowheads) (6–9), the bell-shaped form on colonies of Microcystis aeruginosa (10–11) and floating amoebae (12–13). Scale bars: 20 µm." ;
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fabio:hasRepresentation <https://zenodo.org/record/12538729/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.12538720>
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dc:description "Fig. 3. TEM pictures of the scales on the cell surface of Korotnevella jeppesenii (a, c) and K. pelagolacustris (b, d) trophozoites viewed from top (a, b) and side (c, d). Scale bars: 500 nm." ;
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fabio:hasRepresentation <https://zenodo.org/record/12538720/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.12538725>
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dc:description "Fig. 5. LM pictures of Schoutedamoeba minuta showing trophozoites in non-oriented movement (a–f) and the limax-shaped locomotive form (g–i). The presence of a pronounced hyaline cap, small adhesive uroidal filaments and tiny granules in the cytoplasm are indicated with white arrowheads, black arrows and a white arrow respectively. Scale bars: 20 µm." ;
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fabio:hasRepresentation <https://zenodo.org/record/12538725/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.12538723>
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dc:description "Fig. 4. A – 18S rDNA maximum likelihood phylogeny of the family Hartmannellidae, including Microcystis-associated strains of Copromyxa (in bold). ML bootstrap values respectively posterior probabilities are shown at the nodes. GenBank accession numbers are given together with the species names. B – LM pictures of C. microcystidis showing locomotive trophozoites (1–7, 10) containing a pronounced hyaline cap (white arrowheads), a vesicular nucleus with globular nucleolus (white arrows), big crystals (black arrows) and Microcystis cells inside food vacuoles (black arrowheads), non-oriented moving trophozoites (8–9, 11), a grazing amoeba capturing a Microcystis cell (12–14), the floating form (15) and a double-walled cyst stage (16). C – LM pictures of C. vandevyveri showing locomotive trophozoites (1, 6–9), trophozoites during non-oriented movement (2–5, 10–12) and floating forms (13–15). Black arrows indicate the presence of small, refractive crystals in the cytoplasm, the white arrow shows the vesicular nucleus with a globular lacuna-containing nucleolus, white arrowheads indicate a pronounced hyaline cap. Ingested Microcystis cells are visible in (9) and (11). Scale bars: 20 µm." ;
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fabio:hasRepresentation <https://zenodo.org/record/12538723/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.12538733>
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dc:description "Fig. 8. A – 18S rDNA maximum likelihood phylogeny of Angulamoeba. Sequences new for this study are indicated in bold. ML bootstrap values respectively posterior probabilities are shown at the nodes. GenBank accession numbers are given together with the species names. B – LM pictures of Angulamoeba microcystivorans (strains A1WVB (1, 2, 4) and A4WVB (3)) showing the characteristic rusty-colored plasmodium-like mucilage matrix with embedded trophozoites devouring a culture of Microcystis aeruginosa colonies (1–2), multi-vacuolated trophozoites that are seemingly connected by their filopodia (3) and amoeba-flagellates in different stages of transition (4). Scale bars: 200 µm (1), 100 µm (2), 20 µm (3, 4)." ;
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fabio:hasRepresentation <https://zenodo.org/record/12538733/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.12538727>
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dc:description "Fig. 6. A – 18S rDNA maximum likelihood phylogeny of Vexillifera, including the Microcystis-associated strain (in bold). ML bootstrap values respectively posterior probabilities are shown at the nodes. GenBank accession numbers are given together with the species names. B – LM pictures of locomotive (1–7, 12–13) and floating (8–11) amoebae. Microcystis cells inside food vacuoles are visible in (1–2) and (13). The arrow in (5) points to a temporal, uroid-like structure sometimes visible during locomotion. Scale bars: 20 µm." ;
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fabio:hasRepresentation <https://zenodo.org/record/12538727/files/figure.png> ;
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a fabio:Figure .
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