108 lines
9 KiB
Turtle
108 lines
9 KiB
Turtle
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
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@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
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@prefix bibo: <http://purl.org/ontology/bibo/> .
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@prefix cito: <http://purl.org/spar/cito/> .
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@prefix dc: <http://purl.org/dc/elements/1.1/> .
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@prefix dwc: <http://rs.tdwg.org/dwc/terms/> .
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@prefix dwcFP: <http://filteredpush.org/ontologies/oa/dwcFP#> .
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@prefix fabio: <http://purl.org/spar/fabio/> .
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@prefix trt: <http://plazi.org/vocab/treatment#> .
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@prefix xlink: <http://www.w3.org/1999/xlink/> .
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<http://treatment.plazi.org/id/44755610B002FF87FDD4FA60BAC07684>
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cito:cites <http://dx.doi.org/10.5281/zenodo.3978487>, <http://dx.doi.org/10.5281/zenodo.3978491>, <http://dx.doi.org/10.5281/zenodo.3978489>, <http://dx.doi.org/10.5281/zenodo.3978493>, <http://dx.doi.org/10.5281/zenodo.3978495>, <http://dx.doi.org/10.5281/zenodo.3978497>, <http://dx.doi.org/10.5281/zenodo.3978499> ;
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dc:creator "Pecina, Lukáš; Vďačný, Peter" ;
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dc:title "Paraclevelandia brevis Kidder 1937" ;
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trt:augmentsTaxonConcept <http://taxon-concept.plazi.org/id/Chromista/Paraclevelandia_brevis_Kidder_1937> ;
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trt:publishedIn <http://dx.doi.org/10.5852/ejt.2020.697> ;
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a trt:Treatment .
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<http://dx.doi.org/10.5852/ejt.2020.697>
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bibo:endPage "46" ;
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bibo:journal "European Journal of Taxonomy" ;
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bibo:pubDate "2020-08-06" ;
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bibo:startPage "1" ;
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bibo:volume "697" ;
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dc:creator "Pecina, Lukáš; Vďačný, Peter" ;
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dc:date "2020" ;
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dc:title "Morphological versus molecular delimitation of ciliate species: a case study of the family Clevelandellidae (Protista, Ciliophora, Armophorea)" ;
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fabio:hasPart <http://dx.doi.org/10.5281/zenodo.3978487>, <http://dx.doi.org/10.5281/zenodo.3978491>, <http://dx.doi.org/10.5281/zenodo.3978489>, <http://dx.doi.org/10.5281/zenodo.3978493>, <http://dx.doi.org/10.5281/zenodo.3978495>, <http://dx.doi.org/10.5281/zenodo.3978497>, <http://dx.doi.org/10.5281/zenodo.3978499> ;
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a fabio:JournalArticle .
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<http://taxon-concept.plazi.org/id/Chromista/Paraclevelandia_brevis_Kidder_1937>
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dwc:authority "Kidder, 1937" ;
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dwc:authorityName "Kidder" ;
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dwc:authorityYear "1937" ;
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dwc:genus "Paraclevelandia" ;
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dwc:kingdom "Chromista" ;
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dwc:phylum "Ciliophora" ;
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dwc:rank "species" ;
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dwc:scientificNameAuthorship "Kidder, 1937" ;
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dwc:species "brevis" ;
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trt:hasTaxonName <http://taxon-name.plazi.org/id/Chromista/Paraclevelandia_brevis> ;
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a dwcFP:TaxonConcept .
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<http://taxon-name.plazi.org/id/Chromista/Paraclevelandia_brevis>
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dwc:genus "Paraclevelandia" ;
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dwc:kingdom "Chromista" ;
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dwc:phylum "Ciliophora" ;
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dwc:rank "species" ;
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dwc:species "brevis" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Chromista/Paraclevelandia> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Chromista/Paraclevelandia>
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dwc:genus "Paraclevelandia" ;
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dwc:kingdom "Chromista" ;
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dwc:phylum "Ciliophora" ;
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dwc:rank "genus" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Chromista/Ciliophora> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Chromista/Ciliophora>
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dwc:kingdom "Chromista" ;
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dwc:phylum "Ciliophora" ;
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dwc:rank "phylum" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Chromista> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Chromista>
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dwc:kingdom "Chromista" ;
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dwc:rank "kingdom" ;
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a dwcFP:TaxonName .
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<http://dx.doi.org/10.5281/zenodo.3978487>
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dc:description "Fig. 12. Paraclevelandia brevis Kidder, 1937. Vietnamese specimens isolated from Panesthia angustipennis cognata Bey-Bienko, 1969 from life (A) and after protargol impregnation (B–N). A. Ventral view of a representative specimen, length 50 μm. B–K. Variability of body shape and size as well as of the nuclear (shaded grey) and oral (shaded yellow) apparatus. L. Semi-schematic diagram, showing the general body organization. M–N. Ciliary pattern of ventral and dorsal sides. Arrow marks the right suture, black arrowheads indicate the position of the ciliary whorl (posterior suture). Scale bars = 20 μm." ;
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fabio:hasRepresentation <https://zenodo.org/record/3978487/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.3978491>
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dc:description "Fig. 14. Paraclevelandia brevis Kidder, 1937. Thai I specimens (A–C, F–G) isolated from Panesthia angustipennis angustipennis (Illiger, 1801) and Vietnamese specimens (D–E) isolated from Panesthia angustipennis cognata Bey-Bienko, 1969 from life (A–C) and after protargol impregnation (D–G). A. Ventral overview, showing the general body organization. Arrows mark the proximal end of the peristomial opening, black arrowheads denote the proximal end of the adoral zone of membranelles, white arrowheads denote the karyophore attached to the anterior body pole. B–C. Ciliary pattern of ventral and dorsal sides. Asterisks mark the position of the ciliary whorl (posterior suture). D–G. Ventral views of specimens with well-preserved body shape. Scale bars = 20 μm." ;
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fabio:hasRepresentation <https://zenodo.org/record/3978491/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.3978489>
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dc:description "Fig. 13. Paraclevelandia brevis Kidder, 1937. Thai I specimens isolated from Panesthia angustipennis angustipennis (Illiger, 1801) after protargol impregnation. A–J. Variability of body shape and size as well as of the nuclear (shaded grey) and oral (shaded yellow) apparatus. Scale bar = 20 μm." ;
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fabio:hasRepresentation <https://zenodo.org/record/3978489/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.3978493>
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dc:description "Fig. 15.Cluster analyses of 94 specimens of six clevelandellid morphospecies basedon morphometric data (A) and the cell shape information (B). A. Weighted average linkage clustering method in a combination with Gower’s similarity index. B. Ward’s D2 clustering method in a combination with the Manhattan city block distance. The morphometric and geometrical data delimit the clevelandellid morphospecies consistently and unambiguously, i.e., each clevelandellid morphospecies forms a homogeneous cluster that is well isolated from all other morphospecies analyzed. Since both techniques are phenetic, their results refer only to the similarity of the analyzed morphospecies in phenotypic space and not to their relatedness. Members of each morphospecies are highlighted by the same color." ;
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fabio:hasRepresentation <https://zenodo.org/record/3978493/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.3978495>
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dc:description "Fig. 16. Ordination analyses of 94 specimens of six clevelandellid morphospecies based on morphometric data (A) and cell shape information (B). A. Multidimensional scaling of the Gower’s similarity matrix. B. Principal component analysis of the Fourier coefficients. Eigenvalues of the first two ordination axes are λ1= 0.723 and λ2= 0.135, explaining 85.8% of the total variation. The morphometric and geometrical data delimit the clevelandellid morphospecies consistently and unambiguously, i.e., each clevelandellid morphospecies forms a homogeneous cluster that is well isolated from all other morphospecies analyzed. Members of each morphospecies are highlighted by the same color as in Fig. 15." ;
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fabio:hasRepresentation <https://zenodo.org/record/3978495/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.3978497>
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dc:description "Fig. 17. Phylogeny of the order Clevelandellida de Puytorac & Grain, 1976 based on 18S rRNA gene sequences. Some metopids were used as outgroup. Bootstrap values for maximum likelihood analyses performed in IQTrees and PhyML as well as posterior probabilities for Bayesian interference performed in MrBayes and Phycas were mapped onto the best scoring IQTree. Dashes indicate statistical support below 50%, asterisks denote mismatch with the topology shown. Sequences obtained in this study are in bold face. Members of each morphospecies are marked by the same color, following the code in the inset. For specimen codes and further details, see Table 6. The scale bar denotes three substitutions per one hundred nucleotide positions." ;
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fabio:hasRepresentation <https://zenodo.org/record/3978497/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.3978499>
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dc:description "Fig. 18. Phylogeny of the family Clevelandellidae Kidder, 1938 based on 18S rRNA gene sequences. Bootstrap values for maximum likelihood analyses performed in IQTrees and PhyML as well as posterior probabilities for Bayesian interference performed in MrBayes and Phycas were mapped onto the best scoring IQTree. Dashes indicate statistical support below 50%. Sequences obtained in this study are in bold face. Members of each morphospecies are marked by the same color, as shown in Fig. 17. For specimen codes and further details, see Table 6. The scale bar denotes six substitutions per one thousand nucleotide positions." ;
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fabio:hasRepresentation <https://zenodo.org/record/3978499/files/figure.png> ;
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a fabio:Figure .
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