129 lines
11 KiB
Turtle
129 lines
11 KiB
Turtle
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
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@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
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@prefix bibo: <http://purl.org/ontology/bibo/> .
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@prefix cito: <http://purl.org/spar/cito/> .
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@prefix dc: <http://purl.org/dc/elements/1.1/> .
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@prefix dwc: <http://rs.tdwg.org/dwc/terms/> .
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@prefix dwcFP: <http://filteredpush.org/ontologies/oa/dwcFP#> .
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@prefix fabio: <http://purl.org/spar/fabio/> .
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@prefix trt: <http://plazi.org/vocab/treatment#> .
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<http://treatment.plazi.org/id/0395EB6D3E71FFA4EEA4E7D77D96F94A>
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cito:cites <http://dx.doi.org/10.5281/zenodo.8141897>, <http://dx.doi.org/10.5281/zenodo.8141899>, <http://dx.doi.org/10.5281/zenodo.8141893>, <http://dx.doi.org/10.5281/zenodo.8141903>, <http://dx.doi.org/10.5281/zenodo.8141905>, <http://dx.doi.org/10.5281/zenodo.8141895>, <http://dx.doi.org/10.5281/zenodo.8141907> ;
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dc:creator "Surmik, Dawid; Słowiak-Morkovina, Justyna; Szczygielski, Tomasz; Wojtyniak, Marcin; Środek, Dorota; Dulski, Mateusz; Balin, Katarzyna; Krzykawski, Tomasz; Pawlicki, Roman" ;
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dc:title "Pinacosaurus grangeri Gilmore 1933" ;
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trt:augmentsTaxonConcept <http://taxon-concept.plazi.org/id/Animalia/Pinacosaurus_grangeri_Gilmore_1933> ;
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trt:publishedIn <http://dx.doi.org/10.1093/zoolinnean/zlad001> ;
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a trt:Treatment .
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<http://dx.doi.org/10.1093/zoolinnean/zlad001>
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bibo:endPage "766" ;
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bibo:issue "3" ;
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bibo:journal "Zoological Journal of the Linnean Society" ;
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bibo:pubDate "2023-07-01" ;
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bibo:startPage "747" ;
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bibo:volume "198" ;
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dc:creator "Surmik, Dawid; Słowiak-Morkovina, Justyna; Szczygielski, Tomasz; Wojtyniak, Marcin; Środek, Dorota; Dulski, Mateusz; Balin, Katarzyna; Krzykawski, Tomasz; Pawlicki, Roman" ;
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dc:date "2023" ;
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dc:title "The first record of fossilized soft parts in ossified tendons and implications for the understanding of tendon mineralization" ;
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fabio:hasPart <http://dx.doi.org/10.5281/zenodo.8141897>, <http://dx.doi.org/10.5281/zenodo.8141899>, <http://dx.doi.org/10.5281/zenodo.8141893>, <http://dx.doi.org/10.5281/zenodo.8141903>, <http://dx.doi.org/10.5281/zenodo.8141905>, <http://dx.doi.org/10.5281/zenodo.8141895>, <http://dx.doi.org/10.5281/zenodo.8141907> ;
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a fabio:JournalArticle .
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<http://taxon-concept.plazi.org/id/Animalia/Pinacosaurus_grangeri_Gilmore_1933>
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dwc:authority "Gilmore, 1933" ;
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dwc:authorityName "Gilmore" ;
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dwc:authorityYear "1933" ;
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dwc:class "Reptilia" ;
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dwc:family "Ankylosauridae" ;
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dwc:genus "Pinacosaurus" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Ornithischia" ;
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dwc:phylum "Chordata" ;
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dwc:rank "species" ;
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dwc:scientificNameAuthorship "Gilmore, 1933" ;
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dwc:species "grangeri" ;
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trt:hasTaxonName <http://taxon-name.plazi.org/id/Animalia/Pinacosaurus_grangeri> ;
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a dwcFP:TaxonConcept .
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<http://taxon-name.plazi.org/id/Animalia/Pinacosaurus_grangeri>
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dwc:class "Reptilia" ;
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dwc:family "Ankylosauridae" ;
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dwc:genus "Pinacosaurus" ;
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dwc:kingdom "Animalia" ;
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dwc:order "Ornithischia" ;
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dwc:phylum "Chordata" ;
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dwc:rank "species" ;
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dwc:species "grangeri" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Animalia/Pinacosaurus> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Animalia/Pinacosaurus>
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dwc:genus "Pinacosaurus" ;
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dwc:rank "genus" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Animalia/Ankylosauridae> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Animalia/Ankylosauridae>
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dwc:family "Ankylosauridae" ;
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dwc:rank "family" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Animalia/Ornithischia> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Animalia/Ornithischia>
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dwc:order "Ornithischia" ;
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dwc:rank "order" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Animalia/Reptilia> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Animalia/Reptilia>
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dwc:class "Reptilia" ;
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dwc:rank "class" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Animalia/Chordata> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Animalia/Chordata>
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dwc:phylum "Chordata" ;
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dwc:rank "phylum" ;
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trt:hasParentName <http://taxon-name.plazi.org/id/Animalia> ;
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a dwcFP:TaxonName .
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<http://taxon-name.plazi.org/id/Animalia>
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dwc:kingdom "Animalia" ;
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dwc:rank "kingdom" ;
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a dwcFP:TaxonName .
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<http://dx.doi.org/10.5281/zenodo.8141897>
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dc:description "Figure 3. Light microscopy and SEM of petrographic thin sections and etched surfaces of fossilized ornithischian tendons of Pinacosaurus grangeri: A, cross-section of a larger tendon from the specimen with three associated tendons; B, C, centre of the large, single tendon showing extensive secondary remodelling under normal (B) and polarized (C) light; D, secondary remodelling close to the periphery of the same tendon under transmitted polarized light alpha-compensation mode; E, interfascicular spaces between secondary osteons surrounded by cement lines; F, higher magnification of interfascicular spaces. Note that the fascicles and interfascicular spaces appear to be present in primary tissue only. Green arrows (A–E) mark secondary osteons, orange arrows (E, F) point to cement lines, red arrows (B, C, E, F) indicate interfascicular spaces, and yellow (A, B) point at bone cell lacunae." ;
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fabio:hasRepresentation <https://zenodo.org/record/8141897/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.8141899>
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dc:description "Figure 4. SEM images and EDS spectra of fossil and recent tendon samples. A–I, fibrous matrix in the vascular canals of: A, B, Edmontosaurus regalis (UAMES 52615); C–F, Homalocephale calathocercos (MPC-D 100/1201); G, Pinacosaurus grangeri (ZPAL MgD-II/32); H, I, mineralized tendon of modern turkey (Meleagris gallopaƲo, GIUS-12-3741), note the presence the of fibres both in the vascular canals (white asterisks) and in the bone matrix (black asterisks). J–L, EDS spectra of: J, Edmontosaurus regalis (UAMES 52615); K, Homalocephale calathocercos; L, Meleagris gallopaƲo showing calcium, phosphorus and oxygen as dominant components in tendon mineral matrix in fossil and recent tendon samples. Note that carbon signal is omitted in the spectra (see Material and methods)." ;
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fabio:hasRepresentation <https://zenodo.org/record/8141899/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.8141893>
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dc:description "Figure 1. Light microscopy and SEM of petrographic thin sections and etched surfaces of fossilized ornithischian tendons of Edmontosaurus regalis: A, B, ground section (transverse) of the smaller tendon under transmitted normal light (A) and polarized light alpha-compensation mode (B) exhibiting primary organization of tissue; C, D, ground section (transverse) of the periphery (C) (under transmitted normal light) and centre (D) (under polarized light) of the larger tendon; E, circular backscatter detector (CBS-SEM) image of the etched surface of the tendon shows structures interpreted as vascular canals with vessel-like morphology and attached cell-like structures, well visible branched protrusions (red arrow) are also visible; F, CBS-SEM image longitudinal section of the vessel-like canals with cell-like structures attached to the wall (blue arrow). White arrows indicate young Haversian canals, green mark secondary osteons, and yellow point at bone cell lacunae." ;
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fabio:hasRepresentation <https://zenodo.org/record/8141893/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.8141903>
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dc:description "Figure 5. Structure of Homalocephale calathocercos tendons: A, a colour-scaled topographic image of surface of an individual vascular canal in the tendon (depth profiling); B, reflected light microscopic image of one of the examined vascular canals with lines expressing depth profiles (not to scale); C–H, detailed AFM images of one of the fibre bundles (fascicles) demonstrated in lock-in-amplitude (C, E, G) and lock-in-phase (D, F, H) images; I, AFM topographical image presenting fibre bundles and four measuring profiles; J, surface topology of one of the measure profiles (no. 2 in I) suggesting periodicity of about 24 nm expressed in tip displacement (Supporting Information, Data S2)." ;
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fabio:hasRepresentation <https://zenodo.org/record/8141903/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.8141905>
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dc:description "Figure 6. Fossilized soft parts released from the demineralized tendons of Homalocephale calathocercos (A, C–E) and Edmontosaurus regalis (B, F–P). The sample of H. calathocercos (A) and E. regalis (B) during demineralization. Note the presence of tubular structures released from the mineral phosphate matrix of the fossilized tendons. Dense network of blood vessels forming a mesh-like structure with thicker and thinner vessel-like tubes adjacent to the surface sheath of the partially demineralized tendon of H. calathocercos, visible in: C, transmitted light; D, SEM image (yellow asterisk indicate spot for EDS survey); E, EDS spectrum collected from the blood vessel-like structures reveals the presence of alumino-silicates (Al, Si, O) as the main components; F, tubular structure resembling blood vessels released during the demineralization process; G, the surface of the tubular structure released after demineralization, note the presence of" ;
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fabio:hasRepresentation <https://zenodo.org/record/8141905/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.8141895>
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dc:description "Figure 2. Light microscopy and SEM of petrographic thin sections and etched surfaces of fossilized ornithischian tendons of Homalocephale calathocercos: A, B, general view of the cross-sectioned tendon under transmitted normal (A) and polarized (B) light; C, close-up of the middle of the tendon showing a lattice-like pattern of the coarse collagenous fibre bundles under polarized light; D, close-up of secondary osteons with poorly marked cement lines; E, close-up of the periphery of the tendon under normal light; F, longitudinal section of the tendon under polarized light showing the herringbone-like pattern; G, cross-sectioned tendon in the SEM. Green arrows mark primary osteons, yellow arrow points bone cell lacunae, red asterisk indicate secondary osteons." ;
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fabio:hasRepresentation <https://zenodo.org/record/8141895/files/figure.png> ;
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a fabio:Figure .
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<http://dx.doi.org/10.5281/zenodo.8141907>
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dc:description "Figure 7. FTIR spectra of studied tendon samples of ornithischian dinosaurs: A, powdered samples of a fossilized tendon of Homalocephale calathocercos; B, powdered samples of the extract obtained after demineralization of H. calathocercos tendon; C, powdered samples of a fossilized tendon of Edmontosaurus regalis; D, powdered samples of the extract obtained after demineralization of E. regalis tendon; E, powdered sample of demineralized tendon of Meleagris gallopaƲo, note that phosphate (PO)3– and carbonate (CO)2– signals are masked by the high input of organic residues; F, amide I region of 4 3 samples extract after demineralization of H. calathocercos as well as (G) E. regalis and (H) M. gallopaƲo ossified tendons." ;
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fabio:hasRepresentation <https://zenodo.org/record/8141907/files/figure.png> ;
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a fabio:Figure .
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