Isostichopus badionotus
cites: zenodo.13743182
cites: zenodo.13743190
cites: zenodo.13743200
cites: zenodo.13710653
cites: zenodo.13710651
cites: zenodo.13710647
cites: zenodo.13710659
cites: zenodo.13710657
cites: zenodo.13710655
cites: zenodo.13710649
creator: Borrero-Pérez, Giomar H.; Solís-Marín, Francisco A.; Lessios, Harilaos
augments taxon concept: Isostichopus badionotus Selenka 1867
cites taxon name: Stichopus acanthomella
deprecates: Stichopus badionotus Selenka 1867
deprecates: Stichopus haytiensis Semper 1868
deprecates: Stichopus mobii Semper 1868
deprecates: Stichopus errans Ludwig 1875
deprecates: Stichopus diaboli Heilprin 1888
deprecates: Stichopus xanthomela Heilprin 1888
deprecates: Stichopus moebii Semper 1868
deprecates: Stichopus herrmanni Semper 1868
deprecates: Stichopus hermanni Semper 1868
published in: Understanding the color variability and resolving taxonomic confusion in the sea cucumber Isostichopus badionotus (Echinodermata, Holothuroidea): a revision of the genus Isostichopus
type: Treatment

Understanding the color variability and resolving taxonomic confusion in the sea cucumber Isostichopus badionotus (Echinodermata, Holothuroidea): a revision of the genus Isostichopus
end page: 96
issue: 1
journal: European Journal of Taxonomy
pub date: 2024-08-30
start page: 1
volume: 949
creator: Borrero-Pérez, Giomar H.; Solís-Marín, Francisco A.; Lessios, Harilaos
date: 2024
has part: zenodo.13743182
has part: zenodo.13743190
has part: zenodo.13743200
has part: zenodo.13710653
has part: zenodo.13710651
has part: zenodo.13710647
has part: zenodo.13710659
has part: zenodo.13710657
has part: zenodo.13710655
has part: zenodo.13710649
type: JournalArticle

Isostichopus badionotus Selenka 1867
authority: (Selenka, 1867)
base authority name: Selenka
base authority year: 1867
class: Holothuroidea
family: Stichopodidae
genus: Isostichopus
kingdom: Animalia
order: Synallactida
phylum: Echinodermata
rank: species
scientific name authorship: (Selenka, 1867)
species: badionotus
has taxon name: Isostichopus badionotus
type: TaxonConcept

Stichopus badionotus Selenka 1867
authority: Selenka, 1867: 316
authority: (Selenka, 1867)
authority: Selenka, 1867
authority name: Selenka
authority name: Chips (CH
authority page number: 316
authority year: 1867
base authority name: Selenka
base authority year: 1867
class: Holothuroidea
family: Stichopodidae
genus: Stichopus
kingdom: Animalia
order: Synallactida
phylum: Echinodermata
rank: species
scientific name authorship: Selenka, 1867
scientific name authorship: (Selenka, 1867)
species: badionotus
has taxon name: Stichopus badionotus
type: TaxonConcept

Stichopus haytiensis Semper 1868
authority: Semper, 1868: 75
authority name: Semper
authority page number: 75
authority year: 1868
class: Holothuroidea
family: Stichopodidae
genus: Stichopus
kingdom: Animalia
order: Synallactida
phylum: Echinodermata
rank: species
scientific name authorship: Semper, 1868
species: haytiensis
has taxon name: Stichopus haytiensis
type: TaxonConcept

Stichopus mobii Semper 1868
authority: Semper, 1868: 246
authority name: Semper
authority page number: 246
authority year: 1868
class: Holothuroidea
family: Stichopodidae
genus: Stichopus
kingdom: Animalia
order: Synallactida
phylum: Echinodermata
rank: species
scientific name authorship: Semper, 1868
species: mobii
has taxon name: Stichopus mobii
type: TaxonConcept

Stichopus errans Ludwig 1875
authority: Ludwig, 1875: 97
authority name: Ludwig
authority page number: 97
authority year: 1875
class: Holothuroidea
family: Stichopodidae
genus: Stichopus
kingdom: Animalia
order: Synallactida
phylum: Echinodermata
rank: species
scientific name authorship: Ludwig, 1875
species: errans
has taxon name: Stichopus errans
type: TaxonConcept

Stichopus diaboli Heilprin 1888
authority: Heilprin, 1888: 312
authority name: Heilprin
authority page number: 312
authority year: 1888
class: Holothuroidea
family: Stichopodidae
genus: Stichopus
kingdom: Animalia
order: Synallactida
phylum: Echinodermata
rank: species
scientific name authorship: Heilprin, 1888
species: diaboli
has taxon name: Stichopus diaboli
type: TaxonConcept

Stichopus xanthomela Heilprin 1888
authority: Heilprin, 1888: 313
authority name: Heilprin
authority page number: 313
authority year: 1888
class: Holothuroidea
family: Stichopodidae
genus: Stichopus
kingdom: Animalia
order: Synallactida
phylum: Echinodermata
rank: species
scientific name authorship: Heilprin, 1888
species: xanthomela
has taxon name: Stichopus xanthomela
type: TaxonConcept

Stichopus moebii Semper 1868
authority name: Semper
authority year: 1868
class: Holothuroidea
family: Stichopodidae
genus: Stichopus
kingdom: Animalia
order: Synallactida
phylum: Echinodermata
rank: species
scientific name authorship: Semper, 1868
species: moebii
has taxon name: Stichopus moebii
type: TaxonConcept

Stichopus herrmanni Semper 1868
authority name: Semper
authority year: 1868
class: Holothuroidea
family: Stichopodidae
genus: Stichopus
kingdom: Animalia
order: Synallactida
phylum: Echinodermata
rank: species
scientific name authorship: Semper, 1868
species: herrmanni
has taxon name: Stichopus herrmanni
type: TaxonConcept

Stichopus hermanni Semper 1868
authority name: Semper
authority year: 1868
class: Holothuroidea
family: Stichopodidae
genus: Stichopus
kingdom: Animalia
order: Synallactida
phylum: Echinodermata
rank: species
scientific name authorship: Semper, 1868
species: hermanni
has taxon name: Stichopus hermanni
type: TaxonConcept

Isostichopus badionotus
class: Holothuroidea
family: Stichopodidae
genus: Isostichopus
kingdom: Animalia
order: Synallactida
phylum: Echinodermata
rank: species
species: badionotus
has parent name: Isostichopus
type: TaxonName

Isostichopus
class: Holothuroidea
family: Stichopodidae
genus: Isostichopus
kingdom: Animalia
order: Synallactida
phylum: Echinodermata
rank: genus
has parent name: Stichopodidae
type: TaxonName

Stichopodidae
class: Holothuroidea
family: Stichopodidae
kingdom: Animalia
order: Synallactida
phylum: Echinodermata
rank: family
has parent name: Synallactida
type: TaxonName

Synallactida
class: Holothuroidea
kingdom: Animalia
order: Synallactida
phylum: Echinodermata
rank: order
has parent name: Holothuroidea
type: TaxonName

Holothuroidea
class: Holothuroidea
kingdom: Animalia
phylum: Echinodermata
rank: class
has parent name: Echinodermata
type: TaxonName

Echinodermata
kingdom: Animalia
phylum: Echinodermata
rank: phylum
has parent name: Animalia
type: TaxonName

Animalia
kingdom: Animalia
rank: kingdom
type: TaxonName

Stichopus badionotus
class: Holothuroidea
family: Stichopodidae
genus: Stichopus
kingdom: Animalia
order: Synallactida
phylum: Echinodermata
rank: species
species: badionotus
has parent name: Stichopus
type: TaxonName

Stichopus
class: Holothuroidea
family: Stichopodidae
genus: Stichopus
kingdom: Animalia
order: Synallactida
phylum: Echinodermata
rank: genus
has parent name: Stichopodidae
type: TaxonName

Stichopus haytiensis
class: Holothuroidea
family: Stichopodidae
genus: Stichopus
kingdom: Animalia
order: Synallactida
phylum: Echinodermata
rank: species
species: haytiensis
has parent name: Stichopus
type: TaxonName

Stichopus mobii
class: Holothuroidea
family: Stichopodidae
genus: Stichopus
kingdom: Animalia
order: Synallactida
phylum: Echinodermata
rank: species
species: mobii
has parent name: Stichopus
type: TaxonName

Stichopus errans
class: Holothuroidea
family: Stichopodidae
genus: Stichopus
kingdom: Animalia
order: Synallactida
phylum: Echinodermata
rank: species
species: errans
has parent name: Stichopus
type: TaxonName

Stichopus diaboli
class: Holothuroidea
family: Stichopodidae
genus: Stichopus
kingdom: Animalia
order: Synallactida
phylum: Echinodermata
rank: species
species: diaboli
has parent name: Stichopus
type: TaxonName

Stichopus xanthomela
class: Holothuroidea
family: Stichopodidae
genus: Stichopus
kingdom: Animalia
order: Synallactida
phylum: Echinodermata
rank: species
species: xanthomela
has parent name: Stichopus
type: TaxonName

Stichopus acanthomella
class: Holothuroidea
family: Stichopodidae
genus: Stichopus
kingdom: Animalia
order: Synallactida
phylum: Echinodermata
rank: species
species: acanthomella
has parent name: Stichopus
type: TaxonName

Stichopus moebii
class: Holothuroidea
family: Stichopodidae
genus: Stichopus
kingdom: Animalia
order: Synallactida
phylum: Echinodermata
rank: species
species: moebii
has parent name: Stichopus
type: TaxonName

Stichopus herrmanni
class: Holothuroidea
family: Stichopodidae
genus: Stichopus
kingdom: Animalia
order: Synallactida
phylum: Echinodermata
rank: species
species: herrmanni
has parent name: Stichopus
type: TaxonName

Stichopus hermanni
class: Holothuroidea
family: Stichopodidae
genus: Stichopus
kingdom: Animalia
order: Synallactida
phylum: Echinodermata
rank: species
species: hermanni
has parent name: Stichopus
type: TaxonName

zenodo.13743182
description: Fig. 1 (continued on next page). Color patterns of species and subspecies of Isostichopus Deichmann, 1958. A–J. Isostichopus badionotus (Selenka, 1867). A. Pink background and dark brown spots (Chips pattern – CH) (BT99, Panamá). B. Close-up of A, note large dark brown spots and small dots. C. Light brown background and darker ocellar spots (CH pattern) (INV TEJ1125-Ma10, Colombia). D. Close-up of C, note large ocellar spots and small black dots. E. Uniform black background (Uniform pattern – U) (BT59, Panamá). F. Beige background color with a reticulum of darker brown and yellow papillae (Reticulated pattern – R) (USNM 1659460-BT20, Panamá). G. Close-up of F, reticulated pattern in detail. H. Reticulated pattern with brown papillae (R pattern) (INV TEJ1167-SM4R, Colombia). I. Close-up of H, reticulated pattern in detail. J. Black background and yellow papillae (Black and yellow pattern-BY) (INV TEJ1176-SM13, Colombia). K–Y. Isostichopus maculatus phoenius (Clark, (BI), Maximum Likelihood (ML), and Neighbour-Joining (NJ). BI and ML were performed, using the GTR evolutionary model and NJ using K2P distances. BI was performed with MrBayes ver. 3.2.6 (Ronquist & Huelsenbeck 2003); the data set was run twice, using four Markov chains for ten million generations; trees were sampled every 500th generation, the first 2.5 million generations were discarded, and a 50% majority tree was obtained. ML analysis was performed in MEGA X (Kumar et al. 2018); support was assessed with 1000 bootstrap reiterations.
type: Figure

zenodo.13743190
description: Fig. 3A. Bayesian inference tree of concatenated sequences of the mitochondrial COI-Fr1 (Barcoding region), COI-Fr2 and 16S gene fragments. The numbers on the nodes indicate Bayesian posterior probability/Maximum Likelihood (bootstrap %)/Neighbor Joining (bootstrap %). A hyphen (-) indicates that a node was absent in the tree estimated by a particular method. Individuals are indicated by the field number, which includes the initial letter of the locality and the color pattern when available (see Table 1, Fig. 1). Text color meaning: green = Isosostichopus maculatus maculatus (Greeff, 1882); blue = I. maculatus phoenius (Clark, 1922); pink = I. badionotus (Selenka, 1867) Chips (CH) pattern; purple = Uniform (U) pattern; red = reticulated (R) pattern; orange = Black and Yellow (BY) pattern. Sequences from GenBank are indicated with their accession number and species ID as included in GenBank (see Table 1). Outgroup species: Apostichopus japonicus (Selenka, 1867) and Stichopus horrens Selenka, 1867.
type: Figure

zenodo.13743200
description: Fig. 8 (continued on next page). Color patterns and morphological variation of Isostichopus badionotus (Selenka, 1867) (DNA sequences and detailed information of some specimens are indicated in Table 1, see Photo ID column for correspondence). A–U, I’. Specimens with “Chips” color pattern from Bocas del Toro, Panamá (A–I), Neguanje, Colombia (J–L), La Guajira, Colombia (M–Q); juveniles from Neguanje, Colombia (R–U). V–B’. Specimens with “Uniform” pattern from Bocas del Toro (Panama) (V–X), La Guajira, Colombia (Y), Curaçao (Z), Magdalena, Colombia (A’–B’). C’–K’. Specimens with “Reticulated” pattern from Bocas del Toro, Panama (C’–E’), Juvenile from Neguanje, Colombia (F’), Punta Betin, Magdalena, Colombia (G’–I’), La Guajira, Colombia (J’–K’). L’–O’. Specimens with “Black and yellow” pattern from Bocas del Toro, Panamá (L’), Magdalena, Colombia (M’–O’). Photos: A–I, Q, V–X, C’–E’, L’, O’ by G. Borrero; R–U by G. Ospina; J–L by E. Acosta; M–P, Y, J’–K’ by E. Ortiz; Z, M’ by M. González-Wangüemert; G’–I’ by J. Gómez; and A’–B’, N’ by S. Zea. Scale bars = 10 mm.
type: Figure

zenodo.13710653
description: Fig. 7. Isostichopus badionotus (Selenka, 1867) ossicles (specimen USNM 1659454-BT111, 190 mm long). A. Thin C-shaped rods, tables, perforated plates and large, curved rods from dorsal body wall and papillae. B. Thin C- and S-shaped rods, tables, perforated plates, large, curved rods and end plate (not complete, ¼ of the plate) from ventral body wall and tube feet. C. Rods and tables from tentacles. D. Large tables from mouth membrane. E. Thin C-shaped rods and simple rods from longitudinal muscles. F. Thin C-shaped rods, simple, cross-shaped and irregular plate-like branched rods in the cloaca. G. Table from respiratory trees. H. Cross-shaped ossicles from intestine. I. Simple rod from gonads. Photos by G. Borrero.
type: Figure

zenodo.13710651
description: Fig. 6. Preserved lectotype of Isostichopus badionotus (Selenka, 1867) from Florida, USA (MCZ HOL- 509, 190 mm long). A. Dorsal view. B. Ventral view with original labels. Scale bar = 35 mm. Photos by G. Borrero.
type: Figure

zenodo.13710647
description: Fig. 4. Comparison of the calcareous rings of species and subspecies of Isostichopus Deichmann, 1958. A. I. badionotus (Selenka, 1867). B. I. maculatus phoenius (Clark, 1922) (A–B showing calcareous rings from specimens of different sizes). C. I. maculatus maculatus (Greeff, 1882). D. I. fuscus (Ludwig, 1875). E. I. macroparentheses (Clark, 1922). Dimensions of the individuals from which each ring was obtained are shown next to their museum catalog number. Abbreviations: ip = interradial plate; rp = radial plate. Scale bar = 4 mm.
type: Figure

zenodo.13710659
description: Fig. 11. Light microscope photographs showing ossicles from the mouth membrane, anterior cloaca, posterior cloaca, and gonads of the species and subspecies of Isostichopus Deichmann, 1958. A. I. badionotus (Selenka, 1867) (mouth membrane and gonads from the lectotype MCZ HOL-509; anterior and posterior cloaca from USNM 1659457-IbBT116). B. I. maculatus phoenius (Clark, 1922) (all ossicles from the holotype MCZ HOL-1182). C. I. maculatus maculatus (Greeff, 1882) (all ossicles from the neotype USNM E16150; male gonads at the bottom from the neoparatype USNM E16151). D. I. fuscus (Ludwig, 1875) (mouth membrane from MCZ HOL-742; anterior cloaca from MBMLP- If212; posterior cloaca and gonads from MCZ HOL-743). E. I. macroparentheses (Clark, 1922) (mouth membrane, anterior and posterior cloaca from USNM E47524; gonads from the holotype MCZ HOL- 921). Photos by G. Borrero. Scale bars = 100 µm.
type: Figure

zenodo.13710657
description: Fig. 10. Light microscope photographs of the same specimens as in Fig. 9 (see the length (L) for correspondence), comparing ossicle size and shape from dorsal papillae and dorsal body wall from small to large specimens from each of the species and subspecies of Isostichopus Deichmann, 1958. A. I. badionotus (Selenka, 1867). B. I. maculatus phoenius (Clark, 1922). C. I. maculatus maculatus (Greeff, 1882). D. I. fuscus (Ludwig, 1875). E. I. macroparentheses (Clark, 1922). Photos by G. Borrero. Scale bars = 100 µm.
type: Figure

zenodo.13710655
description: Fig. 9. Box-plots comparing ossicle size from dorsal papillae from small to large specimens(along x axis) from each of the species and subspecies of Isostichopus Deichmann, 1958. A. Dorsal papillae: C-shaped ossicle length. B. Dorsal papillae: table height. C. Dorsal papillae: table disc diameter. Photos of the ossicles of the same specimens are presented in Fig. 10. Specimens IDs: I. badionotus (Selenka, 1867) L = 40 mm, USNM E11783; L = 130 mm, USNM 1659462-BT48; L = 195 mm, USNM 1659454- BT111; L = 230 mm, USNM 1659447–BT116; I. maculatus phoenius (Clark, 1922) L = 25 mm, INV EQU4565; L = 90 mm, USNM 1659481-Ga224; L = 125, USNM 1659472-BT192; L = 185, USNM 1659479-BT53; I. maculatus maculatus (Greeff, 1882) L = 55 mm, ASI1; L = 110 mm, ASI4; L = 150 mm, CV1; I. fuscus (Ludwig, 1875) L = 40 mm, INV EQU4229; L = 115 mm, INV EQU4324; L = 55 mm, MBMLP-If212; L = 180 mm, INV EQU4323; I. macroparentheses (Clark, 1922) L = 20 mm, USNM 1659484-Be99; L = 40 mm, USNM 1659485-Be107; L = 65 mm, MCZ HOL-1214; L = 135 mm, USNM E47524.
type: Figure

zenodo.13710649
description: Fig. 5. Geographic distribution of species and subspecies of Isostichopus Deichmann, 1958. A. I. badionotus (Selenka, 1867) (gray circles), I. maculatus phoenius (Clark, 1922) (red squares) and I. maculatus maculatus (Greeff, 1882) (blue circles). B. I. fuscus (Ludwig, 1875) (green circles) and I. macroparentheses (Clark, 1922) (orange circles). Locations for I. badionotus and I. fuscus were constructed based on observation records in Global Biodiversity Information Facility data and from museum specimens. Locations forI. maculatus phoenius, I. maculatusmaculatus andI. macroparentheses were constructed based only on confirmed localities of collected or preserved museum specimens.
type: Figure

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collection code: MCZ
type status: lectotype
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collection code: MCZ
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type status: lectotype
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collection code: MCZ
event date: 1911-07-11
locality: Harrington Sound
recorded by: E. M. Grosse
verbatim latitude: 32.330555
verbatim longitude: -64.72195
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recorded by: E. M. Grosse
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recorded by: D. L. Pawson
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recorded by: R. U. Gooding & A. G. Humes
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locality: Racoon Key
recorded by: A. S. Merril
verbatim elevation: 46
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catalog number: E27835
collection code: USNM
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recorded by: Georgia Marine Resources for Minerals Management Service
verbatim elevation: 33
verbatim latitude: 30.8967
verbatim longitude: -80.6067
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collection code: USNM
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locality: Inlet
recorded by: W. G. Lyons
verbatim elevation: 64
verbatim latitude: 30.18
verbatim longitude: -80.25
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collection code: MCZ
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locality: GULF OF MEXICO
recorded by: A. C. Fenner Jr
verbatim latitude: 26.44036
verbatim longitude: -82.11371
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catalog number: HOL-1212
collection code: MCZ
event date: 1917-06
locality: Florida Keys
recorded by: H. L. Clark
verbatim latitude: 24.6185
verbatim longitude: -82.8854
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collection code: USNM
event date: 1982-09-28
locality: Florida Keys
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verbatim elevation: 2
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catalog number: Tiss-IbBr15
locality: Santa Catalina
recorded by: IbBr
verbatim latitude: -27.273602
verbatim longitude: -48.36689
http uri: https://treatment.plazi.org/id/F8371571B7113207FD90FD97BB092BDD#C0F6AE3AB71E3234FF0AFC30B9A42E51
type: MaterialCitation