diff --git a/data/07/66/04/07660425D9735A8C8449595ECB2FB2BA.ttl b/data/07/66/04/07660425D9735A8C8449595ECB2FB2BA.ttl new file mode 100644 index 00000000000..a47e8ea9265 --- /dev/null +++ b/data/07/66/04/07660425D9735A8C8449595ECB2FB2BA.ttl @@ -0,0 +1,100 @@ +@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> . +@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . +@prefix bibo: <http://purl.org/ontology/bibo/> . +@prefix cito: <http://purl.org/spar/cito/> . +@prefix dc: <http://purl.org/dc/elements/1.1/> . +@prefix dwc: <http://rs.tdwg.org/dwc/terms/> . +@prefix dwcFP: <http://filteredpush.org/ontologies/oa/dwcFP#> . +@prefix fabio: <http://purl.org/spar/fabio/> . +@prefix trt: <http://plazi.org/vocab/treatment#> . + +<http://treatment.plazi.org/id/07660425D9735A8C8449595ECB2FB2BA> + cito:cites <http://dx.doi.org/10.3897/mycokeys.111.135456.figure4> ; + dc:creator "Bundhun, Digvijayini; Jones, E. B. Gareth; Jayawardena, Ruvishika S.; Camporesi, Erio; Wanasinghe, Dhanushka N.; Senanayake, Indunil C.; Thiyagaraja, Vinodhini; Hyde, Kevin D." ; + dc:title "Robiniigena hyalinospora Bundhun, Camporesi & K. D. Hyde 2024, sp. nov." ; + dwc:basisOfRecord <http://tb.plazi.org/GgServer/dwcaRecords/07660425D9735A8C8449595ECB2FB2BA.mc.7B687A3B6C6DF17CC783C7A8C8859AD3> ; + trt:definesTaxonConcept <http://taxon-concept.plazi.org/id/Fungi/Robiniigena_hyalinospora_Bundhun_2024> ; + trt:publishedIn <http://dx.doi.org/10.3897/mycokeys.111.135456> ; + a trt:Treatment . + +<http://dx.doi.org/10.3897/mycokeys.111.135456> + bibo:endPage "180" ; + bibo:journal "MycoKeys" ; + bibo:pubDate "2024-12-17" ; + bibo:startPage "147" ; + bibo:volume "111" ; + dc:creator "Bundhun, Digvijayini; Jones, E. B. Gareth; Jayawardena, Ruvishika S.; Camporesi, Erio; Wanasinghe, Dhanushka N.; Senanayake, Indunil C.; Thiyagaraja, Vinodhini; Hyde, Kevin D." ; + dc:date "2024" ; + dc:title "Taxonomic novelty in Pleomonodictydaceae and new reports for Ampelomyces quisqualis (Phaeosphaeriaceae), Melomastia maolanensis and M. oleae (Pleurotremataceae)" ; + fabio:hasPart <http://dx.doi.org/10.3897/mycokeys.111.135456.figure4> ; + a fabio:JournalArticle . + +<http://taxon-concept.plazi.org/id/Fungi/Robiniigena_hyalinospora_Bundhun_2024> + dwc:authority "Bundhun, Camporesi & K. D. Hyde" ; + dwc:authorityName "Bundhun, Camporesi & K. D. Hyde" ; + dwc:authorityYear "2024" ; + dwc:class "Dothideomycetes" ; + dwc:genus "Robiniigena" ; + dwc:kingdom "Fungi" ; + dwc:order "Pleosporales" ; + dwc:phylum "Ascomycota" ; + dwc:rank "species" ; + dwc:scientificNameAuthorship "Bundhun, Camporesi & Hyde, 2024" ; + dwc:species "hyalinospora" ; + trt:hasTaxonName <http://taxon-name.plazi.org/id/Fungi/Robiniigena_hyalinospora> ; + a dwcFP:TaxonConcept . + +<http://taxon-name.plazi.org/id/Fungi/Robiniigena_hyalinospora> + dwc:class "Dothideomycetes" ; + dwc:genus "Robiniigena" ; + dwc:kingdom "Fungi" ; + dwc:order "Pleosporales" ; + dwc:phylum "Ascomycota" ; + dwc:rank "species" ; + dwc:species "hyalinospora" ; + trt:hasParentName <http://taxon-name.plazi.org/id/Fungi/Robiniigena> ; + a dwcFP:TaxonName . + +<http://taxon-name.plazi.org/id/Fungi/Robiniigena> + dwc:genus "Robiniigena" ; + dwc:rank "genus" ; + trt:hasParentName <http://taxon-name.plazi.org/id/Fungi/Pleosporales> ; + a dwcFP:TaxonName . + +<http://taxon-name.plazi.org/id/Fungi/Pleosporales> + dwc:order "Pleosporales" ; + dwc:rank "order" ; + trt:hasParentName <http://taxon-name.plazi.org/id/Fungi/Dothideomycetes> ; + a dwcFP:TaxonName . + +<http://taxon-name.plazi.org/id/Fungi/Dothideomycetes> + dwc:class "Dothideomycetes" ; + dwc:rank "class" ; + trt:hasParentName <http://taxon-name.plazi.org/id/Fungi/Ascomycota> ; + a dwcFP:TaxonName . + +<http://taxon-name.plazi.org/id/Fungi/Ascomycota> + dwc:phylum "Ascomycota" ; + dwc:rank "phylum" ; + trt:hasParentName <http://taxon-name.plazi.org/id/Fungi> ; + a dwcFP:TaxonName . + +<http://taxon-name.plazi.org/id/Fungi> + dwc:kingdom "Fungi" ; + dwc:rank "kingdom" ; + a dwcFP:TaxonName . + +<http://dx.doi.org/10.3897/mycokeys.111.135456.figure4> + dc:description "Figure 4. Robiniigena hyalinospora (MFLU 23-0141, holotype) a host substrate b, c ascomata on substrate d vertical section of an ascoma e section of an ostiolar neck f peridium g pseudoparaphyses h – k immature and mature asci l – q immature and mature ascospores r upper view of colony s reverse view of colony. Scale bars: 200 µm (b); 400 µm (c); 100 µm (d); 50 µm (e, h – k); 20 µm (f, l – q); 3 µm (g)." ; + fabio:hasRepresentation <https://binary.pensoft.net/fig/1201609> ; + a fabio:Figure . + +<http://tb.plazi.org/GgServer/dwcaRecords/07660425D9735A8C8449595ECB2FB2BA.mc.7B687A3B6C6DF17CC783C7A8C8859AD3> + dwc:catalogNumber "MFLU 23-0141, MFLUCC 23-0074" ; + dwc:collectionCode "MFLU, MFLUCC" ; + dwc:eventDate "2021-11-18" ; + dwc:locality "Padova" ; + dwc:recordedBy "E. Camporesi" ; + dwc:typeStatus "holotype" ; + trt:httpUri <https://treatment.plazi.org/id/07660425D9735A8C8449595ECB2FB2BA#7B687A3B6C6DF17CC783C7A8C8859AD3> ; + a dwc:MaterialCitation . diff --git a/data/5E/C5/12/5EC512B1461059918C9CA159635F7402.ttl b/data/5E/C5/12/5EC512B1461059918C9CA159635F7402.ttl new file mode 100644 index 00000000000..d815c5c137f --- /dev/null +++ b/data/5E/C5/12/5EC512B1461059918C9CA159635F7402.ttl @@ -0,0 +1,74 @@ +@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> . +@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . +@prefix bibo: <http://purl.org/ontology/bibo/> . +@prefix cito: <http://purl.org/spar/cito/> . +@prefix dc: <http://purl.org/dc/elements/1.1/> . +@prefix dwc: <http://rs.tdwg.org/dwc/terms/> . +@prefix dwcFP: <http://filteredpush.org/ontologies/oa/dwcFP#> . +@prefix fabio: <http://purl.org/spar/fabio/> . +@prefix trt: <http://plazi.org/vocab/treatment#> . + +<http://treatment.plazi.org/id/5EC512B1461059918C9CA159635F7402> + cito:cites <http://dx.doi.org/10.3897/mycokeys.111.135456.figure1> ; + dc:creator "Bundhun, Digvijayini; Jones, E. B. Gareth; Jayawardena, Ruvishika S.; Camporesi, Erio; Wanasinghe, Dhanushka N.; Senanayake, Indunil C.; Thiyagaraja, Vinodhini; Hyde, Kevin D." ; + dc:title "Pleomonodictydaceae Hern. - Restr., J. Mena & Gene" ; + trt:augmentsTaxonConcept <http://taxon-concept.plazi.org/id/Fungi/Pleomonodictydaceae_Restr_> ; + trt:publishedIn <http://dx.doi.org/10.3897/mycokeys.111.135456> ; + a trt:Treatment . + +<http://dx.doi.org/10.3897/mycokeys.111.135456> + bibo:endPage "180" ; + bibo:journal "MycoKeys" ; + bibo:pubDate "2024-12-17" ; + bibo:startPage "147" ; + bibo:volume "111" ; + dc:creator "Bundhun, Digvijayini; Jones, E. B. Gareth; Jayawardena, Ruvishika S.; Camporesi, Erio; Wanasinghe, Dhanushka N.; Senanayake, Indunil C.; Thiyagaraja, Vinodhini; Hyde, Kevin D." ; + dc:date "2024" ; + dc:title "Taxonomic novelty in Pleomonodictydaceae and new reports for Ampelomyces quisqualis (Phaeosphaeriaceae), Melomastia maolanensis and M. oleae (Pleurotremataceae)" ; + fabio:hasPart <http://dx.doi.org/10.3897/mycokeys.111.135456.figure1> ; + a fabio:JournalArticle . + +<http://taxon-concept.plazi.org/id/Fungi/Pleomonodictydaceae_Restr_> + dwc:ID-ENA "2555780" ; + dwc:authority "Hern. - Restr., J. Mena & Gene" ; + dwc:authorityName "Hern. - Restr., J. Mena & Gene" ; + dwc:class "Dothideomycetes" ; + dwc:family "Pleomonodictydaceae" ; + dwc:kingdom "Fungi" ; + dwc:phylum "Ascomycota" ; + dwc:rank "family" ; + dwc:scientificNameAuthorship "Hern. - Restr., Mena & Gene" ; + rdfs:seeAlso <https://www.catalogueoflife.org/data/taxon/6263Q> ; + trt:hasTaxonName <http://taxon-name.plazi.org/id/Fungi/Pleomonodictydaceae> ; + a dwcFP:TaxonConcept . + +<http://taxon-name.plazi.org/id/Fungi/Pleomonodictydaceae> + dwc:class "Dothideomycetes" ; + dwc:family "Pleomonodictydaceae" ; + dwc:kingdom "Fungi" ; + dwc:phylum "Ascomycota" ; + dwc:rank "family" ; + trt:hasParentName <http://taxon-name.plazi.org/id/Fungi/Dothideomycetes> ; + a dwcFP:TaxonName . + +<http://taxon-name.plazi.org/id/Fungi/Dothideomycetes> + dwc:class "Dothideomycetes" ; + dwc:rank "class" ; + trt:hasParentName <http://taxon-name.plazi.org/id/Fungi/Ascomycota> ; + a dwcFP:TaxonName . + +<http://taxon-name.plazi.org/id/Fungi/Ascomycota> + dwc:phylum "Ascomycota" ; + dwc:rank "phylum" ; + trt:hasParentName <http://taxon-name.plazi.org/id/Fungi> ; + a dwcFP:TaxonName . + +<http://taxon-name.plazi.org/id/Fungi> + dwc:kingdom "Fungi" ; + dwc:rank "kingdom" ; + a dwcFP:TaxonName . + +<http://dx.doi.org/10.3897/mycokeys.111.135456.figure1> + dc:description "Figure 1. Phylogram generated from maximum likelihood analysis based on SSU – LSU – ITS – tef 1 - α – rpb 2 combined dataset for the families in Massarineae. The evolutionary model GTR + I + G was applied as the best-fit model for all the loci. The BYPP analysis was run for 3 million generations. The tree is rooted with Leptosphaeria doliolum (CBS 505.75) and Stemphylium vesicarium (CBS 191.86). Maximum likelihood bootstrap, ML BS (≥ 60 %), and BYPP (≥ 0.95) supports are respectively shown above or below the branches. Type strains are in bold black, and the novel taxon is in bold red. (-) indicate ML BS < 60 % or BYPP < 0.95. TreeBASE submission ID: 31443 (Reviewer access URL: http://purl.org/phylo/treebase/phylows/study/TB2:S31443?x-access-code=8ac9bd9583064274a7dded00c2fa3595&format=html)" ; + fabio:hasRepresentation <https://binary.pensoft.net/fig/1201606> ; + a fabio:Figure . diff --git a/data/69/FA/93/69FA93C3C9465FD480B82D1970430332.ttl b/data/69/FA/93/69FA93C3C9465FD480B82D1970430332.ttl new file mode 100644 index 00000000000..bed916294b3 --- /dev/null +++ b/data/69/FA/93/69FA93C3C9465FD480B82D1970430332.ttl @@ -0,0 +1,112 @@ +@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> . +@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . +@prefix bibo: <http://purl.org/ontology/bibo/> . +@prefix cito: <http://purl.org/spar/cito/> . +@prefix dc: <http://purl.org/dc/elements/1.1/> . +@prefix dwc: <http://rs.tdwg.org/dwc/terms/> . +@prefix dwcFP: <http://filteredpush.org/ontologies/oa/dwcFP#> . +@prefix fabio: <http://purl.org/spar/fabio/> . +@prefix trt: <http://plazi.org/vocab/treatment#> . + +<http://treatment.plazi.org/id/69FA93C3C9465FD480B82D1970430332> + cito:cites <http://dx.doi.org/10.3897/mycokeys.111.135456.figure6>, <http://dx.doi.org/10.3897/mycokeys.111.135456.figure3> ; + dc:creator "Bundhun, Digvijayini; Jones, E. B. Gareth; Jayawardena, Ruvishika S.; Camporesi, Erio; Wanasinghe, Dhanushka N.; Senanayake, Indunil C.; Thiyagaraja, Vinodhini; Hyde, Kevin D." ; + dc:title "Melomastia maolanensis Norphoun, T. C. Wen & K. D. Hyde" ; + dwc:basisOfRecord <http://tb.plazi.org/GgServer/dwcaRecords/69FA93C3C9465FD480B82D1970430332.mc.91EFFEF70EABD136784B6E944DB88095> ; + trt:augmentsTaxonConcept <http://taxon-concept.plazi.org/id/Fungi/Melomastia_maolanensis_Zhang_> ; + trt:publishedIn <http://dx.doi.org/10.3897/mycokeys.111.135456> ; + a trt:Treatment . + +<http://dx.doi.org/10.3897/mycokeys.111.135456> + bibo:endPage "180" ; + bibo:journal "MycoKeys" ; + bibo:pubDate "2024-12-17" ; + bibo:startPage "147" ; + bibo:volume "111" ; + dc:creator "Bundhun, Digvijayini; Jones, E. B. Gareth; Jayawardena, Ruvishika S.; Camporesi, Erio; Wanasinghe, Dhanushka N.; Senanayake, Indunil C.; Thiyagaraja, Vinodhini; Hyde, Kevin D." ; + dc:date "2024" ; + dc:title "Taxonomic novelty in Pleomonodictydaceae and new reports for Ampelomyces quisqualis (Phaeosphaeriaceae), Melomastia maolanensis and M. oleae (Pleurotremataceae)" ; + fabio:hasPart <http://dx.doi.org/10.3897/mycokeys.111.135456.figure6>, <http://dx.doi.org/10.3897/mycokeys.111.135456.figure3> ; + a fabio:JournalArticle . + +<http://taxon-concept.plazi.org/id/Fungi/Melomastia_maolanensis_Zhang_> + dwc:authority "(Jin F. Zhang, Jian K. Liu, K. D. Hyde & Zuo Y. Liu) Norphoun, T. C. Wen & K. D. Hyde" ; + dwc:authorityName "Norphoun, T. C. Wen & K. D. Hyde" ; + dwc:baseAuthorityName "Jin F. Zhang, Jian K. Liu, K. D. Hyde & Zuo Y. Liu" ; + dwc:class "Dothideomycetes" ; + dwc:family "Lophiostomataceae" ; + dwc:genus "Melomastia" ; + dwc:kingdom "Fungi" ; + dwc:order "Pleosporales" ; + dwc:phylum "Ascomycota" ; + dwc:rank "species" ; + dwc:scientificNameAuthorship "(Jin Zhang, Jian Liu, Hyde & Zuo Liu) Norphoun, Wen & Hyde" ; + dwc:species "maolanensis" ; + trt:hasTaxonName <http://taxon-name.plazi.org/id/Fungi/Melomastia_maolanensis> ; + a dwcFP:TaxonConcept . + +<http://taxon-name.plazi.org/id/Fungi/Melomastia_maolanensis> + dwc:class "Dothideomycetes" ; + dwc:family "Lophiostomataceae" ; + dwc:genus "Melomastia" ; + dwc:kingdom "Fungi" ; + dwc:order "Pleosporales" ; + dwc:phylum "Ascomycota" ; + dwc:rank "species" ; + dwc:species "maolanensis" ; + trt:hasParentName <http://taxon-name.plazi.org/id/Fungi/Melomastia> ; + a dwcFP:TaxonName . + +<http://taxon-name.plazi.org/id/Fungi/Melomastia> + dwc:genus "Melomastia" ; + dwc:rank "genus" ; + trt:hasParentName <http://taxon-name.plazi.org/id/Fungi/Lophiostomataceae> ; + a dwcFP:TaxonName . + +<http://taxon-name.plazi.org/id/Fungi/Lophiostomataceae> + dwc:family "Lophiostomataceae" ; + dwc:rank "family" ; + trt:hasParentName <http://taxon-name.plazi.org/id/Fungi/Pleosporales> ; + a dwcFP:TaxonName . + +<http://taxon-name.plazi.org/id/Fungi/Pleosporales> + dwc:order "Pleosporales" ; + dwc:rank "order" ; + trt:hasParentName <http://taxon-name.plazi.org/id/Fungi/Dothideomycetes> ; + a dwcFP:TaxonName . + +<http://taxon-name.plazi.org/id/Fungi/Dothideomycetes> + dwc:class "Dothideomycetes" ; + dwc:rank "class" ; + trt:hasParentName <http://taxon-name.plazi.org/id/Fungi/Ascomycota> ; + a dwcFP:TaxonName . + +<http://taxon-name.plazi.org/id/Fungi/Ascomycota> + dwc:phylum "Ascomycota" ; + dwc:rank "phylum" ; + trt:hasParentName <http://taxon-name.plazi.org/id/Fungi> ; + a dwcFP:TaxonName . + +<http://taxon-name.plazi.org/id/Fungi> + dwc:kingdom "Fungi" ; + dwc:rank "kingdom" ; + a dwcFP:TaxonName . + +<http://dx.doi.org/10.3897/mycokeys.111.135456.figure6> + dc:description "Figure 6. Melomastia maolanensis (MFLU 23-0143) a stem of Chromolaena odorata b ascomata on host c vertical section of an ascoma d ostiole e peridium f pseudoparaphyses g, h asci i – m ascospores. Scale bars: 200 µm (b); 100 µm (c); 50 µm (d); 20 µm (e); 5 µm (f); 30 µm (g, h); 10 µm (i – m)." ; + fabio:hasRepresentation <https://binary.pensoft.net/fig/1201611> ; + a fabio:Figure . + +<http://dx.doi.org/10.3897/mycokeys.111.135456.figure3> + dc:description "Figure 3. Phylogram generated from maximum likelihood RaxML analysis based on combined SSU, LSU, and tef 1 - α sequence data. The evolutionary model SYM + I + G was chosen as the best-fit model for SSU while GTR + I + G was applied for LSU and tef 1 - α. The BYPP analysis was run for 2 million generations. The tree is artificially rooted with Anisomeridium phaeospermum (MPN 539) and A. ubianum (MPN 94). Maximum likelihood bootstrap, ML BS (≥ 60 %), and BYPP (≥ 0.95) are given respectively above or below the branches. Type strains are in bold. The newly generated sequences are indicated in bold red. (-) indicates ML BS < 60 % or BYPP < 0.95. TreeBASE submission ID: 31445." ; + fabio:hasRepresentation <https://binary.pensoft.net/fig/1201608> ; + a fabio:Figure . + +<http://tb.plazi.org/GgServer/dwcaRecords/69FA93C3C9465FD480B82D1970430332.mc.91EFFEF70EABD136784B6E944DB88095> + dwc:catalogNumber "MFLU 23-0143" ; + dwc:collectionCode "MFLU" ; + dwc:eventDate "2021-07-07" ; + dwc:locality "Chiang Mai" ; + dwc:recordedBy "N. S. 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B. Gareth; Jayawardena, Ruvishika S.; Camporesi, Erio; Wanasinghe, Dhanushka N.; Senanayake, Indunil C.; Thiyagaraja, Vinodhini; Hyde, Kevin D." ; + dc:title "Robiniigena Bundhun, Camporesi & K. D. Hyde 2024, gen. nov." ; + trt:definesTaxonConcept <http://taxon-concept.plazi.org/id/Fungi/Robiniigena_Bundhun_2024> ; + trt:publishedIn <http://dx.doi.org/10.3897/mycokeys.111.135456> ; + a trt:Treatment . + +<http://dx.doi.org/10.3897/mycokeys.111.135456> + bibo:endPage "180" ; + bibo:journal "MycoKeys" ; + bibo:pubDate "2024-12-17" ; + bibo:startPage "147" ; + bibo:volume "111" ; + dc:creator "Bundhun, Digvijayini; Jones, E. B. Gareth; Jayawardena, Ruvishika S.; Camporesi, Erio; Wanasinghe, Dhanushka N.; Senanayake, Indunil C.; Thiyagaraja, Vinodhini; Hyde, Kevin D." ; + dc:date "2024" ; + dc:title "Taxonomic novelty in Pleomonodictydaceae and new reports for Ampelomyces quisqualis (Phaeosphaeriaceae), Melomastia maolanensis and M. oleae (Pleurotremataceae)" ; + fabio:hasPart <http://dx.doi.org/10.3897/mycokeys.111.135456.figure1> ; + a fabio:JournalArticle . + +<http://taxon-concept.plazi.org/id/Fungi/Robiniigena_Bundhun_2024> + dwc:authority "Bundhun, Camporesi & K. D. Hyde" ; + dwc:authorityName "Bundhun, Camporesi & K. D. 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Phylogram generated from maximum likelihood analysis based on SSU – LSU – ITS – tef 1 - α – rpb 2 combined dataset for the families in Massarineae. The evolutionary model GTR + I + G was applied as the best-fit model for all the loci. The BYPP analysis was run for 3 million generations. The tree is rooted with Leptosphaeria doliolum (CBS 505.75) and Stemphylium vesicarium (CBS 191.86). Maximum likelihood bootstrap, ML BS (≥ 60 %), and BYPP (≥ 0.95) supports are respectively shown above or below the branches. Type strains are in bold black, and the novel taxon is in bold red. (-) indicate ML BS < 60 % or BYPP < 0.95. 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B. Gareth; Jayawardena, Ruvishika S.; Camporesi, Erio; Wanasinghe, Dhanushka N.; Senanayake, Indunil C.; Thiyagaraja, Vinodhini; Hyde, Kevin D." ; + dc:title "Inflatispora Y. Zhang ter, J. Fourn. & K. D. Hyde" ; + trt:augmentsTaxonConcept <http://taxon-concept.plazi.org/id/Fungi/Inflatispora_ter_> ; + trt:publishedIn <http://dx.doi.org/10.3897/mycokeys.111.135456> ; + a trt:Treatment . + +<http://dx.doi.org/10.3897/mycokeys.111.135456> + bibo:endPage "180" ; + bibo:journal "MycoKeys" ; + bibo:pubDate "2024-12-17" ; + bibo:startPage "147" ; + bibo:volume "111" ; + dc:creator "Bundhun, Digvijayini; Jones, E. B. Gareth; Jayawardena, Ruvishika S.; Camporesi, Erio; Wanasinghe, Dhanushka N.; Senanayake, Indunil C.; Thiyagaraja, Vinodhini; Hyde, Kevin D." ; + dc:date "2024" ; + dc:title "Taxonomic novelty in Pleomonodictydaceae and new reports for Ampelomyces quisqualis (Phaeosphaeriaceae), Melomastia maolanensis and M. oleae (Pleurotremataceae)" ; + fabio:hasPart <http://dx.doi.org/10.3897/mycokeys.111.135456.figure1> ; + a fabio:JournalArticle . + +<http://taxon-concept.plazi.org/id/Fungi/Inflatispora_ter_> + dwc:ID-ENA "1255056" ; + dwc:authority "Y. Zhang ter, J. Fourn. & K. D. Hyde" ; + dwc:authorityName "Y. Zhang ter, J. Fourn. & K. D. 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Phylogram generated from maximum likelihood analysis based on SSU – LSU – ITS – tef 1 - α – rpb 2 combined dataset for the families in Massarineae. The evolutionary model GTR + I + G was applied as the best-fit model for all the loci. The BYPP analysis was run for 3 million generations. The tree is rooted with Leptosphaeria doliolum (CBS 505.75) and Stemphylium vesicarium (CBS 191.86). Maximum likelihood bootstrap, ML BS (≥ 60 %), and BYPP (≥ 0.95) supports are respectively shown above or below the branches. Type strains are in bold black, and the novel taxon is in bold red. (-) indicate ML BS < 60 % or BYPP < 0.95. TreeBASE submission ID: 31443 (Reviewer access URL: http://purl.org/phylo/treebase/phylows/study/TB2:S31443?x-access-code=8ac9bd9583064274a7dded00c2fa3595&format=html)" ; + fabio:hasRepresentation <https://binary.pensoft.net/fig/1201606> ; + a fabio:Figure . diff --git a/data/A9/4C/F0/A94CF02EE84854B29E07E9AF65738BB4.ttl b/data/A9/4C/F0/A94CF02EE84854B29E07E9AF65738BB4.ttl new file mode 100644 index 00000000000..f2a938c341f --- /dev/null +++ b/data/A9/4C/F0/A94CF02EE84854B29E07E9AF65738BB4.ttl @@ -0,0 +1,110 @@ +@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> . +@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . +@prefix bibo: <http://purl.org/ontology/bibo/> . +@prefix cito: <http://purl.org/spar/cito/> . +@prefix dc: <http://purl.org/dc/elements/1.1/> . +@prefix dwc: <http://rs.tdwg.org/dwc/terms/> . +@prefix dwcFP: <http://filteredpush.org/ontologies/oa/dwcFP#> . +@prefix fabio: <http://purl.org/spar/fabio/> . +@prefix trt: <http://plazi.org/vocab/treatment#> . + +<http://treatment.plazi.org/id/A94CF02EE84854B29E07E9AF65738BB4> + cito:cites <http://dx.doi.org/10.3897/mycokeys.111.135456.figure7>, <http://dx.doi.org/10.3897/mycokeys.111.135456.figure3> ; + dc:creator "Bundhun, Digvijayini; Jones, E. B. Gareth; Jayawardena, Ruvishika S.; Camporesi, Erio; Wanasinghe, Dhanushka N.; Senanayake, Indunil C.; Thiyagaraja, Vinodhini; Hyde, Kevin D." ; + dc:title "Melomastia oleae W. L. Li, Maharachch. & Jian K. Liu" ; + dwc:basisOfRecord <http://tb.plazi.org/GgServer/dwcaRecords/A94CF02EE84854B29E07E9AF65738BB4.mc.373BFACFA0C6F1703B72B1A7B5806C51> ; + trt:augmentsTaxonConcept <http://taxon-concept.plazi.org/id/Fungi/Melomastia_oleae_Li_> ; + trt:publishedIn <http://dx.doi.org/10.3897/mycokeys.111.135456> ; + a trt:Treatment . + +<http://dx.doi.org/10.3897/mycokeys.111.135456> + bibo:endPage "180" ; + bibo:journal "MycoKeys" ; + bibo:pubDate "2024-12-17" ; + bibo:startPage "147" ; + bibo:volume "111" ; + dc:creator "Bundhun, Digvijayini; Jones, E. B. Gareth; Jayawardena, Ruvishika S.; Camporesi, Erio; Wanasinghe, Dhanushka N.; Senanayake, Indunil C.; Thiyagaraja, Vinodhini; Hyde, Kevin D." ; + dc:date "2024" ; + dc:title "Taxonomic novelty in Pleomonodictydaceae and new reports for Ampelomyces quisqualis (Phaeosphaeriaceae), Melomastia maolanensis and M. oleae (Pleurotremataceae)" ; + fabio:hasPart <http://dx.doi.org/10.3897/mycokeys.111.135456.figure7>, <http://dx.doi.org/10.3897/mycokeys.111.135456.figure3> ; + a fabio:JournalArticle . + +<http://taxon-concept.plazi.org/id/Fungi/Melomastia_oleae_Li_> + dwc:authority "W. L. Li, Maharachch. & Jian K. 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Melomastia oleae (MFLU 23-0144) a ascomata on the stem of Duranta erecta b an ascoma erumpent through the host tissue c vertical section of an ascoma d peridium e pseudoparaphyses f – h asci i – k ascospores. Scale bars: 200 µm (c); 20 µm (d, i – k); 5 µm (e); 30 µm (f – h)." ; + fabio:hasRepresentation <https://binary.pensoft.net/fig/1201612> ; + a fabio:Figure . + +<http://dx.doi.org/10.3897/mycokeys.111.135456.figure3> + dc:description "Figure 3. Phylogram generated from maximum likelihood RaxML analysis based on combined SSU, LSU, and tef 1 - α sequence data. The evolutionary model SYM + I + G was chosen as the best-fit model for SSU while GTR + I + G was applied for LSU and tef 1 - α. The BYPP analysis was run for 2 million generations. The tree is artificially rooted with Anisomeridium phaeospermum (MPN 539) and A. ubianum (MPN 94). Maximum likelihood bootstrap, ML BS (≥ 60 %), and BYPP (≥ 0.95) are given respectively above or below the branches. Type strains are in bold. The newly generated sequences are indicated in bold red. (-) indicates ML BS < 60 % or BYPP < 0.95. TreeBASE submission ID: 31445." ; + fabio:hasRepresentation <https://binary.pensoft.net/fig/1201608> ; + a fabio:Figure . + +<http://tb.plazi.org/GgServer/dwcaRecords/A94CF02EE84854B29E07E9AF65738BB4.mc.373BFACFA0C6F1703B72B1A7B5806C51> + dwc:catalogNumber "MFLU 23-0144, MFLUCC 23-0086" ; + dwc:collectionCode "MFLU, MFLUCC" ; + dwc:eventDate "2021-11-30" ; + dwc:locality "Tha Sut" ; + dwc:recordedBy "V. Thiyagraja" ; + trt:httpUri <https://treatment.plazi.org/id/A94CF02EE84854B29E07E9AF65738BB4#373BFACFA0C6F1703B72B1A7B5806C51> ; + a dwc:MaterialCitation . diff --git a/data/D4/B1/5D/D4B15DF20BA75B87B5E4D7FE19F7F7B5.ttl b/data/D4/B1/5D/D4B15DF20BA75B87B5E4D7FE19F7F7B5.ttl new file mode 100644 index 00000000000..76ef97145a9 --- /dev/null +++ b/data/D4/B1/5D/D4B15DF20BA75B87B5E4D7FE19F7F7B5.ttl @@ -0,0 +1,112 @@ +@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> . +@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . +@prefix bibo: <http://purl.org/ontology/bibo/> . +@prefix cito: <http://purl.org/spar/cito/> . +@prefix dc: <http://purl.org/dc/elements/1.1/> . +@prefix dwc: <http://rs.tdwg.org/dwc/terms/> . +@prefix dwcFP: <http://filteredpush.org/ontologies/oa/dwcFP#> . +@prefix fabio: <http://purl.org/spar/fabio/> . +@prefix trt: <http://plazi.org/vocab/treatment#> . + +<http://treatment.plazi.org/id/D4B15DF20BA75B87B5E4D7FE19F7F7B5> + cito:cites <http://dx.doi.org/10.3897/mycokeys.111.135456.figure5>, <http://dx.doi.org/10.3897/mycokeys.111.135456.figure2> ; + dc:creator "Bundhun, Digvijayini; Jones, E. B. Gareth; Jayawardena, Ruvishika S.; Camporesi, Erio; Wanasinghe, Dhanushka N.; Senanayake, Indunil C.; Thiyagaraja, Vinodhini; Hyde, Kevin D." ; + dc:title "Ampelomyces quisqualis Ces." ; + dwc:basisOfRecord <http://tb.plazi.org/GgServer/dwcaRecords/D4B15DF20BA75B87B5E4D7FE19F7F7B5.mc.F52845A2009BE8BF60C08B0C842E932D> ; + trt:augmentsTaxonConcept <http://taxon-concept.plazi.org/id/Fungi/Ampelomyces_quisqualis_Ces_> ; + trt:publishedIn <http://dx.doi.org/10.3897/mycokeys.111.135456> ; + a trt:Treatment . + +<http://dx.doi.org/10.3897/mycokeys.111.135456> + bibo:endPage "180" ; + bibo:journal "MycoKeys" ; + bibo:pubDate "2024-12-17" ; + bibo:startPage "147" ; + bibo:volume "111" ; + dc:creator "Bundhun, Digvijayini; Jones, E. B. Gareth; Jayawardena, Ruvishika S.; Camporesi, Erio; Wanasinghe, Dhanushka N.; Senanayake, Indunil C.; Thiyagaraja, Vinodhini; Hyde, Kevin D." ; + dc:date "2024" ; + dc:title "Taxonomic novelty in Pleomonodictydaceae and new reports for Ampelomyces quisqualis (Phaeosphaeriaceae), Melomastia maolanensis and M. oleae (Pleurotremataceae)" ; + fabio:hasPart <http://dx.doi.org/10.3897/mycokeys.111.135456.figure5>, <http://dx.doi.org/10.3897/mycokeys.111.135456.figure2> ; + a fabio:JournalArticle . + +<http://taxon-concept.plazi.org/id/Fungi/Ampelomyces_quisqualis_Ces_> + dwc:authority "Ces." ; + dwc:authorityName "Ces." ; + dwc:class "Dothideomycetes" ; + dwc:family "Phaeosphaeriaceae" ; + dwc:genus "Ampelomyces" ; + dwc:kingdom "Fungi" ; + dwc:order "Pleosporales" ; + dwc:phylum "Ascomycota" ; + dwc:rank "species" ; + dwc:scientificNameAuthorship "Ces." ; + dwc:species "quisqualis" ; + rdfs:seeAlso <https://www.catalogueoflife.org/data/taxon/CYGQ> ; + trt:hasTaxonName <http://taxon-name.plazi.org/id/Fungi/Ampelomyces_quisqualis> ; + a dwcFP:TaxonConcept . + +<http://taxon-name.plazi.org/id/Fungi/Ampelomyces_quisqualis> + dwc:class "Dothideomycetes" ; + dwc:family "Phaeosphaeriaceae" ; + dwc:genus "Ampelomyces" ; + dwc:kingdom "Fungi" ; + dwc:order "Pleosporales" ; + dwc:phylum "Ascomycota" ; + dwc:rank "species" ; + dwc:species "quisqualis" ; + trt:hasParentName <http://taxon-name.plazi.org/id/Fungi/Ampelomyces> ; + a dwcFP:TaxonName . + +<http://taxon-name.plazi.org/id/Fungi/Ampelomyces> + dwc:genus "Ampelomyces" ; + dwc:rank "genus" ; + trt:hasParentName <http://taxon-name.plazi.org/id/Fungi/Phaeosphaeriaceae> ; + a dwcFP:TaxonName . + +<http://taxon-name.plazi.org/id/Fungi/Phaeosphaeriaceae> + dwc:family "Phaeosphaeriaceae" ; + dwc:rank "family" ; + trt:hasParentName <http://taxon-name.plazi.org/id/Fungi/Pleosporales> ; + a dwcFP:TaxonName . + +<http://taxon-name.plazi.org/id/Fungi/Pleosporales> + dwc:order "Pleosporales" ; + dwc:rank "order" ; + trt:hasParentName <http://taxon-name.plazi.org/id/Fungi/Dothideomycetes> ; + a dwcFP:TaxonName . + +<http://taxon-name.plazi.org/id/Fungi/Dothideomycetes> + dwc:class "Dothideomycetes" ; + dwc:rank "class" ; + trt:hasParentName <http://taxon-name.plazi.org/id/Fungi/Ascomycota> ; + a dwcFP:TaxonName . + +<http://taxon-name.plazi.org/id/Fungi/Ascomycota> + dwc:phylum "Ascomycota" ; + dwc:rank "phylum" ; + trt:hasParentName <http://taxon-name.plazi.org/id/Fungi> ; + a dwcFP:TaxonName . + +<http://taxon-name.plazi.org/id/Fungi> + dwc:kingdom "Fungi" ; + dwc:rank "kingdom" ; + a dwcFP:TaxonName . + +<http://dx.doi.org/10.3897/mycokeys.111.135456.figure5> + dc:description "Figure 5. Ampelomyces quisqualis (MFLU 23-0142) a ascomata on host substrate b vertical section of an ascoma c section of an ostiole d peridium e pseudoparaphyses f – h asci i – m ascospores n – p hyaline appendages at both ends of ascospores (shown by arrows). Scale bars: 100 µm (b); 50 µm (c); 10 µm (d, i – p, ); 3 µm (e); 30 µm (f – h)." ; + fabio:hasRepresentation <https://binary.pensoft.net/fig/1201610> ; + a fabio:Figure . + +<http://dx.doi.org/10.3897/mycokeys.111.135456.figure2> + dc:description "Figure 2. Phylogenetic tree generated from RaxML analysis, based on LSU – ITS matrix for Ampelomyces. The evolutionary model GTR + I was applied for LSU, while GTR + I + G was the best-fit model for ITS. The BYPP analysis was run for 1 million generations. The tree is rooted with Neosetophoma lonicerae (KUMCC 18-0155). Maximum likelihood bootstrap, ML BS (≥ 60 %), and BYPP (≥ 0.95) supports are shown above the branches, respectively. The type strain is in bold, and the newly collected strain is in bold red. TreeBASE submission ID: 31444." ; + fabio:hasRepresentation <https://binary.pensoft.net/fig/1201607> ; + a fabio:Figure . + +<http://tb.plazi.org/GgServer/dwcaRecords/D4B15DF20BA75B87B5E4D7FE19F7F7B5.mc.F52845A2009BE8BF60C08B0C842E932D> + dwc:catalogNumber "MFLU 23-0142" ; + dwc:collectionCode "MFLU" ; + dwc:eventDate "2021-06-22" ; + dwc:locality "Forli-Cesena" ; + dwc:recordedBy "E. Camporesi" ; + trt:httpUri <https://treatment.plazi.org/id/D4B15DF20BA75B87B5E4D7FE19F7F7B5#F52845A2009BE8BF60C08B0C842E932D> ; + a dwc:MaterialCitation .