treatments-rdf/data/03/89/87/0389878AFFB1214DDA0BFEB2FC2E677C.ttl

@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix bibo: <http://purl.org/ontology/bibo/> .
@prefix cito: <http://purl.org/spar/cito/> .
@prefix dc: <http://purl.org/dc/elements/1.1/> .
@prefix dwc: <http://rs.tdwg.org/dwc/terms/> .
@prefix dwcFP: <http://filteredpush.org/ontologies/oa/dwcFP#> .
@prefix fabio: <http://purl.org/spar/fabio/> .
@prefix trt: <http://plazi.org/vocab/treatment#> .

<http://treatment.plazi.org/id/0389878AFFB1214DDA0BFEB2FC2E677C>
    cito:cites <http://dx.doi.org/10.5281/zenodo.10133304>, <http://taxon-concept.plazi.org/id/Bacteria/Apilactobacillus_apinorum_Zheng_2020>, <http://taxon-concept.plazi.org/id/Bacteria/Apilactobacillus_kosoi_Zheng_2020>, <http://taxon-concept.plazi.org/id/Bacteria/Apilactobacillus_kunkeei_Zheng_2020>, <http://taxon-concept.plazi.org/id/Bacteria/Apilactobacillus_micheneri_Zheng_2020>, <http://taxon-concept.plazi.org/id/Bacteria/Apilactobacillus_quenuiae_Zheng_2020>, <http://taxon-concept.plazi.org/id/Bacteria/Apilactobacillus_timberlakei_Zheng_2020>, <http://taxon-concept.plazi.org/id/Bacteria/Bombilactobacillus_Zheng_2020>, <http://taxon-concept.plazi.org/id/Bacteria/Fructilactobacillus_Zheng_2020>, <http://taxon-concept.plazi.org/id/Bacteria/Lactobacillus_Beijerinck_1901> ;
    dc:creator "Zheng, Jinshui; Wittouck, Stijn; Salvetti, Elisa; Franz, Charles M. A. P.; Harris, Hugh M. B.; Mattarelli, Paola; O’Toole, Paul W.; Pot, Bruno; Vandamme, Peter; Walter, Jens; Watanabe, Koichi; Wuyts, Sander; Felis, Giovanna E.; Gänzle, Michael G.; Lebeer, Sarah" ;
    dc:title "Apilactobacillus Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer 2020, GEN. NOV." ;
    trt:citesTaxonName <http://taxon-name.plazi.org/id/Bacteria/Lactobacillus_apis>, <http://taxon-name.plazi.org/id/Bacteria/Lactobacillus_kunkeei> ;
    trt:definesTaxonConcept <http://taxon-concept.plazi.org/id/Bacteria/Apilactobacillus_Zheng_2020> ;
    trt:publishedIn <http://dx.doi.org/10.1099/ijsem.0.004107> ;
    a trt:Treatment .

<http://dx.doi.org/10.1099/ijsem.0.004107>
    bibo:endPage "2858" ;
    bibo:issue "4" ;
    bibo:journal "International Journal of Systematic and Evolutionary Microbiology" ;
    bibo:pubDate "2020-04-01" ;
    bibo:startPage "2782" ;
    bibo:volume "70" ;
    dc:creator "Zheng, Jinshui; Wittouck, Stijn; Salvetti, Elisa; Franz, Charles M. A. P.; Harris, Hugh M. B.; Mattarelli, Paola; O’Toole, Paul W.; Pot, Bruno; Vandamme, Peter; Walter, Jens; Watanabe, Koichi; Wuyts, Sander; Felis, Giovanna E.; Gänzle, Michael G.; Lebeer, Sarah" ;
    dc:date "2020" ;
    dc:title "A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae" ;
    fabio:hasPart <http://dx.doi.org/10.5281/zenodo.10133304> ;
    a fabio:JournalArticle .

<http://taxon-concept.plazi.org/id/Bacteria/Apilactobacillus_Zheng_2020>
    dwc:authority "Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer, 2020" ;
    dwc:authorityName "Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" ;
    dwc:authorityYear "2020" ;
    dwc:class "Bacilli" ;
    dwc:family "Lactobacillaceae" ;
    dwc:genus "Apilactobacillus" ;
    dwc:kingdom "Bacteria" ;
    dwc:order "Lactobacillales" ;
    dwc:phylum "Firmicutes" ;
    dwc:rank "genus" ;
    dwc:scientificNameAuthorship "Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O’Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Gänzle & Lebeer, 2020" ;
    trt:hasTaxonName <http://taxon-name.plazi.org/id/Bacteria/Apilactobacillus> ;
    a dwcFP:TaxonConcept .

<http://taxon-concept.plazi.org/id/Bacteria/Lactobacillus_Beijerinck_1901>
    dwc:authorityName "Beijerinck" ;
    dwc:authorityYear "1901" ;
    dwc:class "Bacilli" ;
    dwc:family "Lactobacillaceae" ;
    dwc:genus "Lactobacillus" ;
    dwc:kingdom "Bacteria" ;
    dwc:order "Lactobacillales" ;
    dwc:phylum "Firmicutes" ;
    dwc:rank "genus" ;
    dwc:scientificNameAuthorship "Beijerinck, 1901" ;
    trt:hasTaxonName <http://taxon-name.plazi.org/id/Bacteria/Lactobacillus> ;
    a dwcFP:TaxonConcept .

<http://taxon-concept.plazi.org/id/Bacteria/Apilactobacillus_kosoi_Zheng_2020>
    dwc:authorityName "Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" ;
    dwc:authorityYear "2020" ;
    dwc:baseAuthorityName "Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" ;
    dwc:baseAuthorityYear "2020" ;
    dwc:class "Bacilli" ;
    dwc:family "Lactobacillaceae" ;
    dwc:genus "Apilactobacillus" ;
    dwc:kingdom "Bacteria" ;
    dwc:order "Lactobacillales" ;
    dwc:phylum "Firmicutes" ;
    dwc:rank "species" ;
    dwc:scientificNameAuthorship "(Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O’Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Gänzle & Lebeer, 2020) Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O’Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Gänzle & Lebeer, 2020" ;
    dwc:species "kosoi" ;
    trt:hasTaxonName <http://taxon-name.plazi.org/id/Bacteria/Apilactobacillus_kosoi> ;
    a dwcFP:TaxonConcept .

<http://taxon-concept.plazi.org/id/Bacteria/Apilactobacillus_quenuiae_Zheng_2020>
    dwc:authorityName "Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" ;
    dwc:authorityYear "2020" ;
    dwc:baseAuthorityName "Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" ;
    dwc:baseAuthorityYear "2020" ;
    dwc:class "Bacilli" ;
    dwc:family "Lactobacillaceae" ;
    dwc:genus "Apilactobacillus" ;
    dwc:kingdom "Bacteria" ;
    dwc:order "Lactobacillales" ;
    dwc:phylum "Firmicutes" ;
    dwc:rank "species" ;
    dwc:scientificNameAuthorship "(Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O’Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Gänzle & Lebeer, 2020) Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O’Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Gänzle & Lebeer, 2020" ;
    dwc:species "quenuiae" ;
    trt:hasTaxonName <http://taxon-name.plazi.org/id/Bacteria/Apilactobacillus_quenuiae> ;
    a dwcFP:TaxonConcept .

<http://taxon-concept.plazi.org/id/Bacteria/Fructilactobacillus_Zheng_2020>
    dwc:authorityName "Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" ;
    dwc:authorityYear "2020" ;
    dwc:class "Bacilli" ;
    dwc:family "Lactobacillaceae" ;
    dwc:genus "Fructilactobacillus" ;
    dwc:kingdom "Bacteria" ;
    dwc:order "Lactobacillales" ;
    dwc:phylum "Firmicutes" ;
    dwc:rank "genus" ;
    dwc:scientificNameAuthorship "Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O’Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Gänzle & Lebeer, 2020" ;
    trt:hasTaxonName <http://taxon-name.plazi.org/id/Bacteria/Fructilactobacillus> ;
    a dwcFP:TaxonConcept .

<http://taxon-concept.plazi.org/id/Bacteria/Apilactobacillus_apinorum_Zheng_2020>
    dwc:authorityName "Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" ;
    dwc:authorityYear "2020" ;
    dwc:baseAuthorityName "Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" ;
    dwc:baseAuthorityYear "2020" ;
    dwc:class "Bacilli" ;
    dwc:family "Lactobacillaceae" ;
    dwc:genus "Apilactobacillus" ;
    dwc:kingdom "Bacteria" ;
    dwc:order "Lactobacillales" ;
    dwc:phylum "Firmicutes" ;
    dwc:rank "species" ;
    dwc:scientificNameAuthorship "(Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O’Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Gänzle & Lebeer, 2020) Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O’Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Gänzle & Lebeer, 2020" ;
    dwc:species "apinorum" ;
    trt:hasTaxonName <http://taxon-name.plazi.org/id/Bacteria/Apilactobacillus_apinorum> ;
    a dwcFP:TaxonConcept .

<http://taxon-concept.plazi.org/id/Bacteria/Apilactobacillus_timberlakei_Zheng_2020>
    dwc:authorityName "Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" ;
    dwc:authorityYear "2020" ;
    dwc:baseAuthorityName "Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" ;
    dwc:baseAuthorityYear "2020" ;
    dwc:class "Bacilli" ;
    dwc:family "Lactobacillaceae" ;
    dwc:genus "Apilactobacillus" ;
    dwc:kingdom "Bacteria" ;
    dwc:order "Lactobacillales" ;
    dwc:phylum "Firmicutes" ;
    dwc:rank "species" ;
    dwc:scientificNameAuthorship "(Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O’Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Gänzle & Lebeer, 2020) Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O’Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Gänzle & Lebeer, 2020" ;
    dwc:species "timberlakei" ;
    trt:hasTaxonName <http://taxon-name.plazi.org/id/Bacteria/Apilactobacillus_timberlakei> ;
    a dwcFP:TaxonConcept .

<http://taxon-concept.plazi.org/id/Bacteria/Apilactobacillus_micheneri_Zheng_2020>
    dwc:authorityName "Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" ;
    dwc:authorityYear "2020" ;
    dwc:baseAuthorityName "Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" ;
    dwc:baseAuthorityYear "2020" ;
    dwc:class "Bacilli" ;
    dwc:family "Lactobacillaceae" ;
    dwc:genus "Apilactobacillus" ;
    dwc:kingdom "Bacteria" ;
    dwc:order "Lactobacillales" ;
    dwc:phylum "Firmicutes" ;
    dwc:rank "species" ;
    dwc:scientificNameAuthorship "(Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O’Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Gänzle & Lebeer, 2020) Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O’Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Gänzle & Lebeer, 2020" ;
    dwc:species "micheneri" ;
    trt:hasTaxonName <http://taxon-name.plazi.org/id/Bacteria/Apilactobacillus_micheneri> ;
    a dwcFP:TaxonConcept .

<http://taxon-concept.plazi.org/id/Bacteria/Bombilactobacillus_Zheng_2020>
    dwc:authorityName "Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" ;
    dwc:authorityYear "2020" ;
    dwc:class "Bacilli" ;
    dwc:family "Lactobacillaceae" ;
    dwc:genus "Bombilactobacillus" ;
    dwc:kingdom "Bacteria" ;
    dwc:order "Lactobacillales" ;
    dwc:phylum "Firmicutes" ;
    dwc:rank "genus" ;
    dwc:scientificNameAuthorship "Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O’Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Gänzle & Lebeer, 2020" ;
    trt:hasTaxonName <http://taxon-name.plazi.org/id/Bacteria/Bombilactobacillus> ;
    a dwcFP:TaxonConcept .

<http://taxon-concept.plazi.org/id/Bacteria/Apilactobacillus_kunkeei_Zheng_2020>
    dwc:authorityName "Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" ;
    dwc:authorityYear "2020" ;
    dwc:baseAuthorityName "Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O’Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer" ;
    dwc:baseAuthorityYear "2020" ;
    dwc:class "Bacilli" ;
    dwc:family "Lactobacillaceae" ;
    dwc:genus "Apilactobacillus" ;
    dwc:kingdom "Bacteria" ;
    dwc:order "Lactobacillales" ;
    dwc:phylum "Firmicutes" ;
    dwc:rank "species" ;
    dwc:scientificNameAuthorship "(Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O’Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Gänzle & Lebeer, 2020) Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O’Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Gänzle & Lebeer, 2020" ;
    dwc:species "kunkeei" ;
    trt:hasTaxonName <http://taxon-name.plazi.org/id/Bacteria/Apilactobacillus_kunkeei> ;
    a dwcFP:TaxonConcept .

<http://taxon-name.plazi.org/id/Bacteria/Apilactobacillus>
    dwc:class "Bacilli" ;
    dwc:family "Lactobacillaceae" ;
    dwc:genus "Apilactobacillus" ;
    dwc:kingdom "Bacteria" ;
    dwc:order "Lactobacillales" ;
    dwc:phylum "Firmicutes" ;
    dwc:rank "genus" ;
    trt:hasParentName <http://taxon-name.plazi.org/id/Bacteria/Lactobacillaceae> ;
    a dwcFP:TaxonName .

<http://taxon-name.plazi.org/id/Bacteria/Lactobacillaceae>
    dwc:family "Lactobacillaceae" ;
    dwc:rank "family" ;
    trt:hasParentName <http://taxon-name.plazi.org/id/Bacteria/Lactobacillales> ;
    a dwcFP:TaxonName .

<http://taxon-name.plazi.org/id/Bacteria/Lactobacillales>
    dwc:order "Lactobacillales" ;
    dwc:rank "order" ;
    trt:hasParentName <http://taxon-name.plazi.org/id/Bacteria/Bacilli> ;
    a dwcFP:TaxonName .

<http://taxon-name.plazi.org/id/Bacteria/Bacilli>
    dwc:class "Bacilli" ;
    dwc:rank "class" ;
    trt:hasParentName <http://taxon-name.plazi.org/id/Bacteria/Firmicutes> ;
    a dwcFP:TaxonName .

<http://taxon-name.plazi.org/id/Bacteria/Firmicutes>
    dwc:phylum "Firmicutes" ;
    dwc:rank "phylum" ;
    trt:hasParentName <http://taxon-name.plazi.org/id/Bacteria> ;
    a dwcFP:TaxonName .

<http://taxon-name.plazi.org/id/Bacteria>
    dwc:kingdom "Bacteria" ;
    dwc:rank "kingdom" ;
    a dwcFP:TaxonName .

<http://dx.doi.org/10.5281/zenodo.10133304>
    dc:description "Fig. 6. Gene family presence/absence patterns in Lactobacillaceae and Leuconostocaceae. Each column represents a gene family presence/absence pattern in species of Lactobacillaceae and Leuconostoaceae, where presence is indicated with a dot. The absolute number of gene families that conform to each pattern is visualized in the marginal bar plot at the top. Separations between phylogroups are indicated with horizontal black lines. We defined genes that were present in all genomes of a clade and in none of the genomes outside of that clade as ‘signature genes’ (dark blue); other genes are shown in light blue. Only presence/absence patterns followed by four or more gene families are shown. Patterns of presence in a single species or all species are not shown. Unassigned species are clusters of closely related genomes which could not be assigned to a known species due to low whole-genome similarity to a type strain and/or low 16S rRNA similarity to a type strain." ;
    fabio:hasRepresentation <https://zenodo.org/record/10133304/files/figure.png> ;
    a fabio:Figure .